Phylogenetic relationships among Coregonus species inferred from the DNA sequence of the first internal transcribed spacer (ITS1) of ribosomal DNA

Canadian Journal of Fisheries and Aquatic Sciences

Volumn 54, Issue 7, 1997, Pages 1494-1503

  Linn Sajdak, S ^a   Phillips, Ruth B ^a,b  

^a UNIVERSITY OF ROCHESTER   (United States)

^b UNIVERSITY OF WISCONSIN MILWAUKEE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COREGONINAE; COREGONUS; COREGONUS CLUPEAFORMIS; COREGONUS LAVARETUS; COREGONUS PELED; PROSOPIUM; STENODUS;

EID: 0030830378     PISSN: 0706652X     EISSN: None     Source Type: Journal    
DOI: 10.1139/cjfas-54-7-1494     Document Type: Article

References (38)

1. Alt, K.T. 1971. Occurrence of hybrids between inconnu, Stenodus leucichthys nelma (Pallas), and humpback whitefish, Coregonus pidschian (Linnaeus) in Catanika River, Alaska. Trans. Am. Fish. Soc. 2: 362-364.
2. Behnke, R.J. 1972. The systematics of salmonid fishes of recently glaciated lakes. J. Fish. Res. Board Can. 29: 639-671.
3. Berg, L.S. 1948. Freshwater fishes of the USSR and aAdjacent countries. Vol. 1. Academy of Sciences of the U.S.S.R. Zoological Institute Guide to the Fauna of the U.S.S.R. No. 27. [Transi, from the Russian by the Israel Program for Scientific Translations for National Science Foundation, Washington D.C.]
4. Bernatchez, L., Savard, L., Dodson, J.J., and Pollotta, D. 1988. Mitochondrial DNA sequence heterogeneity among James-Hudson Bay anadromous coregonines. Finn. Fish. Res. 9: 17-26.
5. Bernatchez, L., and Dodson, J.J. 1994. Phylogenetic relationships among Palearctic and Nearctic Whitefish (Coregonus sp.) populations as revealed by mitochondrial DNA variation. Can. J. Fish. Aquat. Sci. 51(Suppl. 1): 240-251.
6. Bernatchez, L., Colombani, F., and Dodson, J.J. 1991. Phylogenetic relationships among the subfamily Coregoninae as revealed by mitochondrial DNA restriction analysis. J. Fish Biol. 39(Suppl. A): 283-290.
7. Bodaly, R.A., Vuorinen, J., Ward, R.D., Luczynski, M., and Reist, J.D. 1991a. Genetic comparisons of New and Old World coregonid fishes. J. Fish Biol. 38: 37-51.
8. Bodaly, R.A., Vuorinen, J., and Macins, V. 1991b. Sympatric presence of dwarf and normal forms of the lake whitefish, Coregonus clupeaformis, in Como Lake, Ontario. Can. Field-Nat. 105(1): 87-90.
9. Bodaly, R.A., Vuorinen, J.A., Reshetnikov, Y.S., and Reist, J.D. 1994. Genetic relationships of five species of coregonid fishes from Siberia. J. Ichthyol. 34(6): 117-130.
10. Cabot, E.L., and Beckenbach, A.T. 1989. Simultaneous editing of multiple nucleic acid and protein sequences using ESEE. Comput. Appl. Biosci. 5: 233-234.
11. Domanico, M.J. 1994. Phylogenetic analysis of Pacific salmon using nuclear and mitochondrial DNA sequences. Ph.D. thesis, University of Wisconsin, Milwaukee, Wis.
12. Ermolenko, L.N. 1992. Genetic divergence in the family Coregonidae. Pol. Arch. Hydrobiol. 39: 533-539.
13. Fritz, G.N., Conn, J., Cockburn, A., and Seawright, J. 1994. Sequence analysis of the ribosomal DNA internal transcribed spacer 2 from populations of Anopheles nuneztovari (Diptera: Culicidae). Mol. Biol. Evol. 11(3): 406-416.
14. Gonzales, I.L., Sylvester, J.E., Smith, T.F., Stambolian, D., and Schmickel, R.D. 1990. Ribosomal RNA gene sequences and hominoid phylogeny. Mol. Biol. Evol. 7(3): 203-219.
15. Hillis, D.M., Moritz, C., Porter, C.A. and Baker, R.J. 1991. Evidence for biased gene conversion in concerted evolution of ribosomal DNA. Science (Washington, D.C.), 251: 308-310.
16. Kumar, S., Tamura, K., and Nei, M. 1993. MEGA: Molecular Evolutionary Genetics Analysis, version 1.0 edition. Pennsylvania State University, University Park, PA 16802, U.S.A.
17. Luczynski, M., Falkowski, S., Vuorinen, J., and Jankun, M. 1992. Genetic identification of European whitefish (Coregonus lavaretus), peled (C. peled) and their hybrids in spawning stocks of ten Polish lakes. Pol. Arch. Hydrobiol. 39: 571-577.
18. Lindsey, C.C. 1981. Stocks are chameleons: plasticity in gill rakers of coregonid fishes. Can. J. Fish Aquat. Sci. 38: 1497-1506.
19. Lockwood, S.F., Dillinger R.E., Jr., Birt, T.P., Green, J.M., and Snyder, T.P. 1993. Phylogenetic relationships among members of the Coregoninae inferred from direct sequencing of PCR-amplified mitochondrial DNA. Can. J. Fish. Aquat. Sci. 50: 2112-2118.
20. Nazar, R.N., and Roy,K.L. 1978. Nucleotide sequence of rainbow trout (Salmo gairdneri) ribosomal 5.8s ribonucleic acid. J. Biol. Chem. 153: 395-399.
21. Norden, C.R. 1961. Comparative osteology of representative salmonid fishes, with particular reference to the grayling (Thymallus arcticus) and its phylogeny. J. Fish. Res. Board Can. 18: 679-791.
22. Phillips, R.B., Manley, S.A., and Daniels, T.J. 1994. Systematics of the salmonid genus Salvelinus inferred from ribosomal DNA sequences. Can. J. Fish. Aquat. Sci. 51(Suppl. 1): 198-204.
23. Phillips, R.B., Sajdak,S.L., and Domanico, M.J. 1995. Relationships among chairs based on DNA sequences. Nord. J. Freshwater Res. 71: 378-391.
24. Pleyte, K.A., Duncan, S.D., and Phillips, R.B. 1992. Evolutionary relationships of the salmonid fish genus Salvelinus inferred from DNA sequences of the first internal transcribed spacer (ITS1) of ribosomal DNA. Mol. Phylogenet. Evol. 1(3): 223-230.
25. Reist, J.D., Vourinen, J., and Bodaly, R.A. 1992. Genetic and morphological identification of coregonid hybrid fishes from Arctic Canada. Pol. Arch. Hydrobiol. 39: 551-561.
26. Saiki, R., Gelfund, D., Stoffel, S., Scharf, S., Higuchi, R., Horn, G., Mullis, K., and Erlich, H. 1988. Primer directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science (Washington, D.C.), 239: 487-491.
27. Sajdak, S.L. 1995. Phylogenetic analysis of coregonid fishes based on nuclear and mitochondrial DNA. Ph.D. thesis, University of Wisconsin, Milwaukee, Wis.
28. Salim, M., and Maden, B.E. 1981. Nucleotide sequence of Xenopus laevis 18S ribosomal RNA inferred from gene sequence. Nature (London), 291: 205-208.
29. Sambrook, J., Fritsch, E.F., and Maniatis, T. 1989. Molecular cloning. A laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
30. Shields, B.A., and Underhill, J.C. 1993. Phenotypic plasticity of a transplanted population of dwarf cisco, Coregonus artedii. Environ. Biol. Fishes, 37: 9-23.
31. Smith, G.R., and Todd, T.N. 1984. Evolution of species flocks of fishes in north temperate lakes. In Evolution of fish species flocks. Edited by I. Kornfield and A.A. Echelle. University of Maine Press, Orono. pp. 45-68.
32. Smith, G.R., and Todd, T.N. 1992. Morphological cladistic study of coregonine fishes. Pol. Arch. Hydrobiol. 39: 479-490.
33. Snyder, T.P., Larsen, R.D., and Bowen, S.H. 1992. Mitochondrial DNA diversity among Lake Superior and inland lake ciscoes (Coregonus artedi and C. hoyi). Can. J. Fish. Aquat. Sci. 49: 1902-1907.
34. Svärdson, G. 1970. Significance of introgression in coregonid evolution. In Biology of coregonid fishes. Edited by C.C. Lindsey and C.S. Woods. University of Manitoba Press, Winnipeg, pp. 33-59.
35. Swofford, D.L. 1993. PAUP: phylogenetic analysis using parsimony, version 3.1 edition. Illinois Natural History Survey, Champaign.
36. Todd, T.N., Smith, G.R., and Cable, L.E. 1981. Environmental genetic contributions to morphological differentiation in ciscoes (Coregonine) of the Great Lakes. Can. J. Fish. Aquat. Sci. 38: 59-67.
37. Vogler, A.P., and DeSalle, R. 1994. Evolution and phylogenetic information content of the ITS-1 region in the tiger beetle Cicindela dorsalis. Mol. Biol Evol. 11(3): 393-405.
38. Ware, V.C., Tague, B.W., Clark, G.G., Course, R.L., Brand, R.C., and Gerbi, S.A. 1983. Sequence analysis of 28S ribosomal DNA from the amphibian Xenopus laevis. Nucleic Acid Res. 11(22): 7795-7817.