Thermosipho melanesiensis sp. nov., a new thermophilic anaerobic bacterium belonging to the order Thermotogales, isolated from deep-sea hydrothermal vents in the Southwestern Pacific Ocean

International Journal of Systematic Bacteriology

Volumn 47, Issue 4, 1997, Pages 1118-1123

  Antoine, E ^a   Cilia, V ^b   Meunier, J R ^c   Guezennec, J ^a   Lesongeur, F ^a   Barbier, G ^a  

^a IFREMER   (France)

^b SORBONNE UNIVERSITÉ   (France)

^c L ORÉAL RECHERCHE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; RIBOSOME RNA;

ANAEROBIC BACTERIUM; ARTICLE; BACTERIUM ISOLATION; CONTROLLED STUDY; NONHUMAN; PACIFIC OCEAN; PHENOTYPE; PRIORITY JOURNAL; RNA SEQUENCE; THERMOPHILIC BACTERIUM;

EID: 0030829566     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-47-4-1118     Document Type: Article

References (38)

1. Andrews, K. T., and B. K. C. Patel. 1996. Fervidobacterium gondwanense sp. nov., a new thermophilic anaerobic bacterium isolated from nonvolcanically heated geothermal waters of the Great Artesian Basin of australia. Int. J. Syst. Bacteriol. 46:265-269.
2. Balch, W. E., G. E. Fox, R. J. Magrum, and R. S. Wolfe. 1979. Methanogens: reevalution of a unique biological group. Microbiol. Rev. 43:260-296.
3. Bligh, E. G., and W. J. Dyer. 1959. A rapid method for lipid extraction and purification. Can. J. Microbiol. 35:911-917.
4. Davey, M. B., W. A. Wood, R. Key, K. Nakamura, and D. Stahl. 1993. Isolation of three species of Geotoga and Petrotoga: two new genera, representing a new lineage in the bacterial line of descent distantly related to the "Thermotogales." Syst. Appl. Microbiol. 16:191-200.
5. Desbruyères, D., A. M. Alayse-Danet, S. Ohta, and the Scientific Parties of Biolau and Starmer Cruises. 1994. Deep-sea hydrothermal communities in Southwestern Pacific back-arc basins (the North-Fiji and Lau Basins): composition, microdistribution and food web. Mar. Geol. 116:227-242.
6. Felsenstein, J. 1990. PHYLIP package, version 3.3. Department of Genetics, University of Washington, Seattle.
7. Fouquet, Y., U. Von Stackelberg, J. L. Charlou, J. P. Donval, J. Erzinger, J. P. Foucher, P. Herzig, R. Mühe, S. Soakai, M. Wiedicke, and H. Whitechurch. 1991. Hydrothermal activity and metallogenesis in the Lau back-arc basin. Nature 349:778-781.
8. Grimont, P. A. D., M. Y. Popoff, F. Grimont, C. Coynault, and M. Lemelin. 1980. Reproductibility and correlation study of three deoxyribonucleic acid hybridization procedures. Curr. Microbiol. 4:337-342.
9. Guezennec, J. G. 1991. Influence of cathodic protection of mild steel on the growth of sulphate-reducing bacteria at 35°C in marine sediments. Biofouling 3:339-348.
10. Hobbie, J. E., R. J. Daley, and S. Jasper. 1977. Use of Nuclepore filters for counting bacteria by fluorescence microscopy. Appl. Environ. Microbiol. 33:1225-1228.
11. Huber, R., T. A. Langworthy, H. König, M. Thomm, C. R. Woese, U. B. Sleytr, and K. O. Stetter. 1986. Thermotoga maritíma sp. nov. represents a new genus of unique extremely thermophilic eubacteria growing up to 90°C. Arch. Microbiol. 144:324-333.
12. Huber, R., C. R. Woese, T. A. Langworthy, H. Fricke, and K. O. Stetter. 1989. Thermosipho africanus gen. nov., represents a new genus of thermophilic eubacteria within the "Thermotogales." Syst. Appl. Microbiol. 12:32-37.
13. Huber, R., C. R. Woese, T. A. Langworthy, J. K. Kristjansson, and K. O. Stetter. 1990. Fervidobacterium islandicum sp. nov., a new extremely thermophilic eubacterium belonging to the "Thermotogales." Arch. Microbiol. 154:105-111.
14. Huber, R., and K. O. Stetter. 1992. The "Thermotogales": hyperthermophilic and extremely thermophilic bacteria, p. 185-194. In J. K. Kristjansson (ed.), Thermophilic bacteria. CRC Press, London, United Kingdom.
15. Jannasch, H. W., R. Huber, S. Belkin, and K. O. Stetter. 1988. Thermotoga neapolitana sp. nov. of the extremely thermophilic, eubacterial genus Thermotoga. Arch. Microbiol. 150:103-104.
16. Jeanthon, C., A. L. Reysenbach, S. L'Haridon, A. Gambacorta, N. R. Pace, P. Glénat, and D. Prieur. 1995. Thermotoga subterranea sp. nov., a new thermophilic bacterium isolated from a continental oil reservoir. Arch. Microbiol. 164:91-97.
17. Kengen, S. W. M., and A. J. M. Stams. 1994. Formation of L-Alanine as a reduced end product in carbohydrate fermentation by the hyperthermophilic archaeon Pyrococcus furiosus. Arch. Microbiol. 161:168-175.
18. Lindroth, P., and K. Mopper. 1979. High performance liquid chromatographic determination of subpicomole amounts of amino acids by precolumn fluorescence derivatization with o-phthaldialdehyde. Anal. Chem. 51:1667-1674.
19. Marmur, J. 1961. A procedure for isolation of deoxyribonucleic acid from microorganisms. J. Mol. Biol. 3:208-218.
20. Marmur, J., and P. Doty. 1962. Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J. Mol. Biol. 5:109-118.
21. Nichols, P. D., J. B. Guckert, and D. C. White. 1986. Determination of monounsaturated fatty acid double bond position and geometry for microbial monocultures and complex consortia by capillary GC-MS of their dimethyldisulfur adducts. J. Microbiol. Methods 5:49-55.
22. Patel, B. K. C., H. W. Morgan, and R. M. Daniel. 1985. Fervidobacterium nodosum gen. nov. and spec. nov., a new chemoorganotrophic, caldoactive, anaerobic bacterium. Arch. Microbiol. 141:63-69.
23. Pecina, R., G. Bonn, E. Burtcher, and O. Bobleter. 1984. High performance liquid chromatographic elution behaviour of alcohols, aldehydes, ketones, organic acids and carbohydrates on a string carbon exchange stationary phase. J. Chromatogr. 287:245-259.
24. Prieur, D., G. Erauso, and C. Jeanthon. 1995. Hyperthermophilic life at deep-sea hydrothermal vents. Planet. Space Sci. 43:115-122.
25. Popoff, M. Y., and C. Coynault. 1980. Use of DEAE-cellulose filters in the S1 nuclease method for bacterial deoxyribonucleic acid hybridization. Ann. Microbiol. 131A:151-155.
26. Ravot, G., M. Magot, M.-L. Fardeau, B. K. C. Patel, G. Prensier, A. Egan, J.-L. Garcia, and B. Ollivier. 1995. Thermotoga elfii sp. nov., a novel thermophilic bacterium from an African oil-producing well. Int. J. Syst. Bacteriol. 45:308-314.
27. Ravot, G., B. Ollivier, M. Magot, B. K. C. Patel, J.-L. Crolet, M.-L. Fardeau, and J.-L. Garcia. 1995. Thiosulfate reduction, an important physiological feature shared by members of the order Thermotogales. Appl. Environ. Microbiol. 61:2053-2055.
28. Ravot, G., B. Ollivier, B. K. C. Patel, M. Magot, and J.-L. Garcia. 1996. Emended description of Thermosipho africanus as a carbohydrate-fermenting species using thiosulfate as an electron acceptor. Int. J. Syst. Bacteriol. 46:321-323.
29. Ravot, G., B. Ollivier, M.-L. Fardeau, B. K. C. Patel, K. T. Andrews, M. Magot, and J.-L. Garcia. 1996. L-Alanine production from glucose fermentation by hyperthermophilic members of the domains Bacteria andArchaea: a remnant of an ancestral metabolism? Appl. Environ. Microbiol. 62:2657-2659.
30. Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
31. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
32. Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
33. Swofford, D. 1992. PAUP: phylogenetic analysis using parsimony, version 3.0s. Illinois Natural History Survey, Champaign.
34. von Cosel, R., and B. Métivier. 1994. Three new species of Bathymodiolus (Bivalvia: Mytilidae) from hydrothermal vents in the Lau Basin and the North Fiji Basin, Western Pacific, and the Snake Pit Area, Mid-Atlantic Ridge. Veliger 37:374-392.
35. White, D. C., J. S. Nickels, J. D. King, and R. J. Bobbie. 1979. Determination of the sedimentary microbial biomass by extractable lipid phosphate. Oecologia 40:51-62.
36. Wiegel, J. 1992. The anaerobic thermophilic bacteria, p. 105-184. In J. K. Kristjansson (ed.), Thermophilic bacteria. CRC Press, London, United Kingdom.
37. Windberger, E., R. Huber, A. Trincone, H. Fricke, and K. O. Stetter. 1989. Thermotoga thermarum sp. nov. and Thermotoga neapolitana occurring in African continental solfataric springs. Arch. Microbiol. 151:506-512.
38. Zobell, C. E. 1941. Studies on marine bacteria. I. The cultural requirements of heterotrophic aerobes. J. Mar. Res. 4:42-75.