Microbial participation in the formation of siliceous deposits from geothermal water and analysis of the extremely thermophilic bacterial community

FEMS Microbiology Ecology

Volumn 24, Issue 1, 1997, Pages 41-48

  Inagaki, Fumio ^a   Hayashi, Shu ^a   Doi, Katsumi ^a   Motomura, Yoshinobu ^a   Izawa, Eiji ^a   Ogata, Seiya ^a  

^a KYUSHU UNIVERSITY   (Japan)

Author keywords

16S rDNA; Bio deposition; Extremely thermophilic bacterium; Siliceous deposit

Indexed keywords

HOT WATER; RIBOSOME DNA; SILICATE; SILICIC ACID; SILICON DIOXIDE;

BACTERIA; BACTERIAL COMMUNITY; GEOTHERMAL WATER; MICROBIAL COMMUNITY; SILICA FORMATION; THERMOPHILIC BACTERIA;

ARTICLE; CONTROLLED STUDY; ECOLOGY; JAPAN; MINERALIZATION; NEW ZEALAND; NONHUMAN; POSITION; PRIORITY JOURNAL; THERMOPHILIC BACTERIUM;

EID: 0030829090     PISSN: 01686496     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-6496(97)00042-1     Document Type: Article

References (26)

1. Lowenstam, H.A. and Weiner, S.W. (1989) On Biomineralization. Oxford University Press, New York.
2. Cook, T.L. and Stakes, D.S. (1995) Biogeological mineralization in deep-sea hydrothermal deposits. Science 267, 1975-1979.
3. Zuerenberg, R.A. and Schiffman, P. (1990) Microbial control of silver mineralization at a sea-floor hydrothermal site on the northern Gorda Ridge. Nature 348, 155-157.
4. Ferris, F.G., Beveridge, T.J. and Fyfe, W.S. (1986) Iron-silica crystallite nucleation by bacteria in a geothermal sediment. Nature 320, 609-611.
5. Ferris, F.G., Fyfe, W.S. and Beveridge, T.J. (1987) Bacteria as nucleation sites for authigenic minerals in a metal-contaminated lake sediment. Chem. Geol. 63, 225-232.
6. Ferris, F.G., Schultze, S., Wetten, T.C., Fyfe, W.S. and Beveridge, T.J. (1989) Metal interactions with microbial biofilms in acidic and neutral pH environments. Appl. Environ. Microbiol. 55, 1249-1257.
7. Tazaki, K. (1995) Electron microscopic observation of biomineralization in biomats from hot springs. J. Geol. Soc. Japan 101, 304-314.
8. Urrutia, M.M. and Beveridge, T.J. (1994) Formation of fine-grained metal and silicate precipitates on a bacterial surface (Bacillus subtilis). Chem. Geol. 116, 261-280.
9. Urrutia, M.M. and Beveridge, T.J. (1993) Mechanism of silicate binding to the bacterial cell wall in Bacillus subtilis. J. Bacteriol. 175, 1936-1945.
10. Yanagase, T., Suginohara, Y. and Yanagase, K. (1970) The properties of scales and methods to prevent them. Geothermics, special issue 2, 1619-1623.
11. Yokoyama, T., Sato, Y., Maeda, Y., Tarutani, T. and Maeda, R. (1993) Siliceous deposits formed from geothermal water I. The major constituents and the existing states of iron and aluminum. Geochem. J. 27, 375-384.
12. Iler, R.K. (1979) Polymerization of silica. In: The Chemistry of Silica, pp. 172-311. Wiley, New York.
13. Tsai, Y.-L. and Oison, B.H. (1991) Rapid method for direct extraction of DNA from soil and sediments. Appl. Environ. Microbiol. 57, 1070-1074.
14. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd edn., pp. E.5-E.7. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
15. Oyaizu, H. (1992) Identification of bacteria and analysis of microflora by analysis of 16S rRNA sequences. In: Microbial Ecology (Japanese Society of Microbial Ecology, Eds.), pp. 51-60. Business Center for Academic Societies of Japan, Tokyo.
16. Altschul, S.F., Gish, W., Miller, W., Myers, E.W. and Lipman, D.J. (1990) Basic local alignment search tool. J. Mol. Biol. 215, 403-410.
17. Kimura, M. (1980) Evolutionary rate at the molecular level. J. Mol. Evol. 16, 111-120.
18. Woese, C.R., Kandier, O. and Wheelis, M. (1990) Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya. Proc. Natl. Acad. Sci. USA 87, 4576-4579.
19. Kristjansson, J.K., Ingason, A. and Alfredsson, G.A. (1985) Isolation of thermophilic obligately autotrophic hydrogen-oxidizing bacteria, similar to Hydrogenobacter thermophilus, from Icelandic hot springs. Arch. Microbiol. 140, 321-325.
20. Pitulle, C., Yang, Y., Marchiani, M., Moore, E.R.B., Siefert, J.L., Aragno, M., Jurtshuk, P.J.R. and Fox, G.E. (1994) Phylogenetic position of the genus Hydrogenobacter. Int. J. Syst. Bacteriol. 44, 620-626.
21. Reysenbach, A.-L., Wickham, G.S. and Pace, N.R. (1994) Phylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park. Appl. Environ. Microbiol. 60, 2113-2119.
22. Shima, S., Yanagi, M. and Saiki, H. (1994) The phylogenetic position of Hydrogenobacter acidophilus based on 16S rRNA sequence analysis. FEMS. Microbiol. Lett. 119, 119-122.
23. Saul, D.J., Rodrigo, A.G., Reeves, R.A., Williams, L.C., Borges, K.M., Morgan, H.W. and Bergquist, P.L. (1993) Phylogeny of twenty Thermus isolates constructed from 16S rRNA gene sequence data. Int. J. Syst. Bacteriol. 43, 754-760.
24. Rainey, F.A., Ward, N.L., Morgan, H.W., Toalster, R. and Stackebrandt, E. (1993) Phylogenetic analysis of anaerobic thermophilic bacteria:aid for their reclassification. J. Bacteriol. 175, 4772-4779.
25. Stramer, S.L. and Starzyk, M.J. (1981) The occurrence and survival of Thermus aquaticus. Microbios 45, 99-110.
26. Marteinsson, V.T., Birrien, J.-L., Kristjánsson, J.K. and Prieur, D. (1995) First isolation of thermophilic aerobic non-sporulating heterotrophic bacteria from deep-sea hydrothermal vents. FEMS Microbiol. Ecol. 18, 163-174.