Actinin-associated LIM protein: Identification of a domain interaction between PDZ and spectrin-like repeat motifs

Journal of Cell Biology

Volumn 139, Issue 2, 1997, Pages 507-515

  Xia, Houhui ^a   Winokur, Sara T ^b   Kuo, Wen Lin ^a   Altherr, Michael R ^b   Bredt, David S ^a,c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTININ; DYSTROPHIN; NITRIC OXIDE SYNTHASE; SPECTRIN;

ALTERNATIVE RNA SPLICING; AMINO ACID SEQUENCE; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CARBOXY TERMINAL SEQUENCE; CHROMOSOME 4Q; CONTROLLED STUDY; EMBRYO; FACIOSCAPULOHUMERAL MUSCULAR DYSTROPHY; GENE LOCUS; GENE MAPPING; HUMAN; HUMAN TISSUE; MUSCLE DEVELOPMENT; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN PROTEIN INTERACTION; RABBIT; RAT; SKELETAL MUSCLE;

ACTININ; AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BINDING SITES; CELL LINE; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN, PAIR 4; HUMANS; KARYOTYPING; MICROFILAMENT PROTEINS; MOLECULAR SEQUENCE DATA; MUSCLE, SKELETAL; POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SPECTRIN; VARIATION (GENETICS);

EID: 0030827949     PISSN: 00219525     EISSN: None     Source Type: Journal    
DOI: 10.1083/jcb.139.2.507     Document Type: Article

References (51)

1. Adams, M.E., M.H. Butler, T.M. Dwyer, M.F. Peters, A.A. Murnane, and S.C. Froener. 1993. Two forms of mouse syntrophin, a 58 kd dystrophin-associated protein, differ in primary structure and tissue distribution. Neuron. 11: 531-540.
2. Altherr, M.R., U. Bengtsson, R.P. Markovich, and S.T. Winokur. 1995. Efforts toward understanding the molecular basis of facioscapulohumeral muscular dystrophy. Muscle Nerve. 2:S32-S38.
3. Arber, S., G. Halder, and P. Caroni. 1994. Muscle LIM protein, a novel essential regulator of myogenesis, promotes myogenic differentiation. Cell. 79: 221-231.
4. Arber, S., J.J. Hunter, J. Ross, Jr., M. Hongo, G. Sansig, J. Borg, J.C. Perriard, K.R. Chien, and P. Caroni. 1997. MLP-deficient mice exhibit a disruption of cardiac cytoarchitectural organization, dilated cardiomyopathy, and heart failure. Cell. 88:393-403.
5. Bedell, M.A., N.A. Jenkins, and N.G. Copeland. 1996 Good genes in bad neighborhoods [news: comment]. Nat. Genet. 12:229-232.
6. Beggs, A.H., T.J. Byers, J.H. Knoll, F.M. Boyce. G.A. Bruns, and L.M. Kunkel. 1992. Cloning and characterization of two human skeletal muscle alpha-actinin genes located on chromosomes 1 and 11.J. Biol. Chem. 267:9281-9288.
7. Bodrug, S.E., J.R. Roberson, L. Weiss, P.N. Ray, R.G. Worton, and D.L. Van Dyke. 1990. Prenatal identification of a girl with a t(X;4)(p21;q35) translocation: molecular characterisation, paternal origin, and association with musular dystrophy. J. Med. Genet. 27:426-432.
8. Brenman, j.E., D.S. Chao, H. Xia, K. Aldape, and D.S. Bredt. 1995. Nitric oxide synthase complexed with dystrophin and absent from skeletal muscle sarcolemma in Duchenne muscular dystrophy. Cell. 82:743-752.
9. Brenman, J.E., D.S. Chao, S.H. Gee, A.W. McGee, S.E. Craven, D.R. Santillano, F. Huang, H. Xia, M.F. Peters, S.C. Froehner, and D.S. Bredt. 1996. Interaction of nitric oxide synthase with the postsynaptic density protein PSD-95 and α-1 syntrophin mediated by PDZ motifs. Cell 84:757-767.
10. Brenman, J.E., and D.S. Bredt. 1997. Synaptic signaling by nitric oxide. Curr. Opin. Neurobiol. 7:374-378.
11. Carlock, L.R., D. Smith, and J.J. Wasmuth. 1986, Genetic counterselective procedure to isolate interspecific cell hybrids containing single human chromosomes, construction of cell hybrids and recombinant DNA libraries specific for human chromosomes 3 and 4. Somat. Cell Mol. Genet. 12:163-174.
12. Chao, D.S., R.M. Gorospe, J.E. Brenman, J.A. Rafael, M.F. Peters, S.C. Froehner, E.P. Hoffman, J.S. Chamberlain, and D.S. Bredt. 1996. Selective loss of sarcolemmal nitric oxide synthase in Becker muscular dystrophy. J. Exp. Med 184:609-618.
13. Cho, K.O., C.A. Hunt, and M.B. Kennedy. 1992. The rat brain postsynaptic density fraction contains a homolog of the Drosophila discs-large tumor suppressor protein. Neuron. 9:929-942.
14. + channel Kir 2.3 to PSD-95 is regulated by protein kinase A phosphorylation. Neuron. 17:759-767.
15. Fields, S., and O. Song. 1989. A novel genetic system to detect protein-protein interactions. Nature (Land.). 340:245-246.
16. Freyd, G., S.K. Kim, and H.R. Horvitz. 1990. Novel cysteine-rich motif and homeodomain in the product of the Caenorhabditis elegans cell lineage gene lin-11. Nature (Lond.). 344:876-879.
17. Hoffman, E.P., F. Lehmann-Horn, and R. Rudel. 1995. Overexcited or inactive: ion channels in muscle disease. Cell. 80:681-686.
18. Hoskins, R., A.F. Hajnal, S.A. Harp, and S.K. Kim. 1996. The C. elegans vulval induction gene lin-2 encodes a member of the MAGUK family of cell junction proteins. Development (Camb.). 122:97-111.
19. Karlsson, O., S. Thor, T. Norberg, H. Ohlsson, and T. Edlund. 1990. Insulin gene enhancer binding protein Isl-1 is a member of a novel class of proteins containing both a homeo-and a Cys-His domain. Nature (Lond.). 344:879-882.
20. Kiess, M., B. Scharm, A. Aguzzi, A. Hajnal, R. Klemenz, I. Schwarte-Waldhoff, and R. Schafer. 1995. Expression of ril, a novel LIM domain gene, is downregulated in Hras-transformed cells and restored in phenotypic revenants. Oncogene. 10:61-68.
21. + channels by direct interaction with the PSD-95/SAP90 family of membrane-associated guanylate kinases. Nature (Lond.). 378:85-88.
22. Kornan, H.-C., L.T. Schenker, M.B. Kennedy, and P.H. Seeburg. 1995. Domain interaction between NMDA receptor subunits and the postsynaptic density protein PSD-95. Science (Wash. DC). 269:1737-1740.
23. Kornau, H.-C., P.H. Seeburg, and M.B. Kennedy. 1997. Interaction of ion channels and receptors with PDZ domains. Curr. Opin. Neurobiol. In press.
24. Kozak, M. 1991. Structural features in eukaryotic mRNAs that modulate the initiation of translation. J. Biol. Chem. 266:19867-19870.
25. Kuroda, S., C. Tokunaga, Y. Kiyohara, O. Higuchi, H. Konishi, K. Mizuno, G.N. Gill, and U. Kikkawa. 1996. Protein-protein interaction of zinc finger LIM domains with protein kinase C. J. Biol. Chem. 271:31029-31032.
26. Lyle, R., T.J. Wright, L.N. Clark, and J.E. Hewitt. 1995. The FSHD-associated repeat, D4Z4, is a member of a dispersed family of homeobox-containing repeats, subsets of which are clustered on the short arms of the acrocentric chromosomes. Genomics. 28:389-397.
27. Marfatia, S.M., J.H. Cabral, L. Lin, C. Hough, P.J. Bryant, L. Stolz, and A.H. Chishti. 1996. Modular organization of the PDZ domains in the human discslarge protein suggests a mechanism for coupling PDZ domain-binding proteins to ATP and the membrane cytoskeleton. J. Cell Biol. 135:753-766.
28. Peters, M.F., N.R. Kramarcy, R. Sealock, and S.C. Froehner. 1994. beta 2-Syntrophin: localization at the neuromuscular junction in skeletal muscle. Neuroreport. 5:1577-1580.
29. Ponting, C.P., and C. Phillips. 1995. DHR domains in syntrophins, neuronal NO synthases and other intracellular proteins. Trends Biol. Sci. 20:102-103.
30. Sakamoto, M., D. Pinkel, L. Mascio, D. Sudar, D. Peters, W.L. Kuo, K. Yamakawa, Y. Nakamura, H. Drabkin, Z. Jericevic, et al., 1995. Semiautomated DNA probe mapping using digital imaging microscopy: II. System performance. Cytometry. 19:60-69.
31. Sanchez-Garcia, I., and T.H. Rabbitts. 1994. The LIM domain: a new structural motif found in zinc-finger-like proteins. Trends Genet. 10:315-320.
32. Sassoon, D., and H. Rosenthal. 1993. Detection of messenger RNA by in situ hybridization. Methods in Enzymol. 225:384-404.
33. Sato, T., S. Irie, S. Kitada, and J.C. Reed. 1995. FAP-1: a protein tyrosine phosphatase that associates with Fas. Science (Wash. DC). 268:411-415.
34. Schmeichel, K.L., and M.C. Beckerle. 1994. The LIM domain is a modular protein-binding interface. Cell. 79:211-219.
35. Sheng, M. 1996. PDZs and receptor/channel clustering: rounding up the latest suspects [comment]. Neuron. 17:575-578.
36. Shieh, B.H., and B. Niemeyer. 1995. A novel protein encoded by the InaD gene regulates recovery of visual transduction in Drosophila. Neuron. 14:201-210.
37. 2+ channel by INAD in Drosophila photoreceptors. Neuron. 16:991-998.
38. Smith, F.J., R.A. Eady. I.M. Leigh, J.R. McMillan, E.L. Rugg, D.P. Kelsell, S.P. Bryant, N.K. Spurr, J.F. Geddes, G. Kirtschig, et al. 1996. Plectin deficiency results in muscular dystrophy with epidermolysis bullosa. Nat. Genet. 13:450-457.
39. Songyang, Z., A.S. Fanning, C. Fu, J. Xu, S.M. Marfatia, A.M. Chishti, A. Crompton, A.C. Chan, J.M. Anderson, and L.C. Cantley. 1997. Recognition of unique carboxyl-terminal motifs by distinct PDZ domains. Science (Wash. DC). 275:73-77.
40. Stokke, T., C. Collins, W.L. Kuo, D. Kowbel, F. Shadravan, M. Tanner, A. Kallioniemi, O.P. Kallioniemi, D. Pinkel. L. Deaven, et al. 1995. A physical map of chromosome 20 established using fluorescence in situ hybridization and digital image analysis. Genomics. 26:134-137.
41. Stricker, N.L., K.S. Christopherson, B.A. Yi, P.J. Schatz, R.W. Raab. G. Dawes, D.E. Bassett. Jr., D.S. Bredt, and M. Li. 1997. PDZ domain of neuronal nitric oxide synthase recognizes novel C-terminal peptide sequences as determined by in vitro selection. Nature Biotechnol. 15:336-342.
42. van Deutekom, J.C., C. Wijmenga, E.A. van Tienhoven, A.M. Gruter, J.E. Hewitt, G.W. Padberg, G.J. van Ommen, M.H. Hofker, and R.R. Frants. 1993. FSHD associated DNA rearrangements are due to deletions of integral copies of a 3.2 kb tandemly repeated unit. Hum. Mol. Genet. 2:2037-2042.
43. Wadman, I., J. Li, R.O. Bash, A. Forster, H. Osada, T.H. Rabbitts, and R. Baer. 1994. Specific in vivo association between the bHLH and LIM proteins implicated in human T cell leukemia. EMBO J. 13:4831-4839.
44. Wang, H., D.C. Harrison-Shostak, J.J. Lemasters, and B. Herman. 1995. Cloning of a rat cDNA encoding a novel LIM domain protein with high homology to rat RIL. Gene (Amst.). 165:267-271.
45. Way, J.C., and M. Chalfie. 1988. mec-3, a homeobox-containing gene that specifies differentiation of the touch receptor neurons in C. elegans. Cell. 54:5-16.
46. Wiche, G., R. Krepler, U. Artlieb, R. Pytela, and H. Denk. 1983. Occurrence and immunolocalization of plectin in tissues. J. Cell Biol. 97:887-901.
47. Wijmenga, C., J.E. Hewitt, L.A. Sandkuijl, L.N. Clark, T.J. Wright, H.G. Dauwerse, A.M. Gruter, M.H. Hofker, P. Moerer, R. Williamson, et al., 1992. Chromosome 4q DNA rearrangements associated with facioscapulohumeral muscular dystrophy. Nat. Genet. 2:26-30.
48. Willott, E., M.S. Balda, A.S. Fanning, B. Jameson, C. Van Itallie, and J.M. Anderson. 1993. The tight junction protein ZO-1 is homologous to the Drosophila discs-large tumor suppressor protein of septate junctions. Proc. Natl. Acad. Sci. USA. 90:7834-7838.
49. Winokur, S.T., U. Bengtsson, J. Feddersen, K.D. Mathews, B. Weiffenbach, H. Bailey, R.P. Markovich, J.C. Murray, J.J. Wasmuth. M.R. Altherr, et al. 1994. The DNA rearrangement associated with facioscapulohumeral muscular dystrophy involves a heterochromatin-associated repetitive element: implications for a role of chromatin structure in the pathogenesis of the disease. Chromosome Res. 2:225-234.
50. Winokur, S.T., B. Schutte, B. Weiffenbach, S.S. Washington, D. McElligott, A. Chakravarti, J.H. Wasmuth, and M.R. Altherr. 1993. A radiation hybrid map of 15 loci on the distal long arm of chromosome 4, the region containing the gene responsible for facioscapulohumeral muscular dystrophy (FSHD). Am. J. Hum. Genet. 53:874-880.
51. Wu, R., K. Durick, Z. Songyang, L.C. Cantley, S.S. Taylor, and G.N. Gill. 1996. Specificity of LIM domain interactions with receptor tyrosine kinases. J. Biol. Chem. 271:15934-15941.