Pedigree and RAPD-based DNA analysis of commercial U.S. rice cultivars

Crop Science

Volumn 37, Issue 5, 1997, Pages 1630-1635

  Cao, D ^a   Oard, J H ^b  

^a UNIVERSITY OF IOWA   (United States)

^b LOUISIANA STATE UNIVERSITY AGRICULTURAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ORYZA SATIVA;

EID: 0030827698     PISSN: 0011183X     EISSN: None     Source Type: Journal    
DOI: 10.2135/cropsci1997.0011183X003700050037x     Document Type: Article

References (26)

1. Bollich, C.N., B.D. Webb, M.A. Marchetti, and J.E. Scott. 1985. Registration of Lemont rice. Crop Sci. 25:883-885.
2. Carnhan, H.L., C.W. Johnson, S.T. Tseng, and D.M. Brandon. 1980. Registration of S-201 rice. Crop Sci. 20:551.
3. Cho, Y.G., M.W. Blair, O. Panaud, and S.R. McCouch. 1996. Cloning and mapping of variety-specific rice genomic DNA sequences: amplified fragment length polymorphisms (AFLP) from silver-stained polyacrylamide gels. Genome 39:373-378.
4. Dallas, J.F. 1988. Detection of DNA fingerprints of cultivated rice by hybridization with a human minisatellite probe. Proc. Natl. Acad. Sci. (USA) 85:6831-6835.
5. Dilday, R.H. 1990. Contribution of ancestral lines in the development of new cultivars of rice. Crop Sci. 30:905-911.
6. Ghareyazie, B., N. Huang, G. Second, J. Benne, and G.S. Khush. 1995. Classification of rice germplasm: I. Analysis using ALP and PCR-based RFLP. Theor. Appl. Genet. 91:218-227.
7. 5 detects DNA fingerprints and sequences homologous to gene transcripts in rice. Biochem. Genet. 32:1-8.
8. Jodon, N.E., and E.A. Sonnier. 1973. Registration of Della rice. Crop Sci 13:773.
9. Johnson, C.W., H.L. Carnhan, S.T. Tseng, and J.E. Hill. 1981. Registration of M-302 rice. Crop Sci. 21:986.
10. MacKill, D.J. 1995. Classifying japonica rice cultivars with RAPD markers. Crop Sci. 35:889-894.
11. Malécot, G. 1948. Les mathematiques de l'hérédité. Masson & Cie, Paris.
12. Nei, M., and W.H. Li. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. (USA). 76:5269-5273.
13. Pang, J.P., L.C. Chen, L.F.O. Chen, and S.C.R. Chen. 1992. DNA polymorphisms generated by arbitrarily primed PCR in rice. Biosci. Biotech. Biochem. 56:1357-1358.
14. Ramakrishna, W., M.D. Lagu, V.S. Gupta, and P.K. Ranjekar. 1994. DNA fingerprinting in rice using oligonucleotide probes specific for simple repetitive DNA sequences. Theor. Appl. Genet. 88:402-406.
15. SAS Institute Inc., 1989. SAS/STAT User's Guide, version 6, fourth edition, vol 1. SAS Institute, Inc., Cary, NC.
16. Seilhan, P. 1995. Rice varieties and management tips. Louisiana Coop. Extens. Serv. Publ. 2270.
17. Tinker, N.A., and D.E. Mather. 1993. Software for computing kinship coefficients. J. Hered. 84:238.
18. Tinker, N.A., M.G. Martin, and D.E. Mather. 1993. Random amplified polymorphic DNA and pedigree relationships in spring barely. Theor. Appl. Genet. 85:976-984.
19. Tseng, S.T., H.L. Carnahan, C.W. Johnson, and D.M. Brandon. 1979. Registration of L-201 rice. Crop Sci. 19:745-746.
20. Tseng, S.T., H.L. Carnahan, C.W. Johnson, J.J. Oster, J.E. Hill, and S.C. Scardaci. 1984. Registration of L-202 rice. Crop Sci. 24:1213.
21. Vos, P., R. Hogers, M. Bleeker, M. Reijans, T. van de Lee, M. Hornes, A. Fritjers, J.Pot, J. Peleman, M. Kuiper, and M. Zabeau. 1995. AFLP: A new concept for DNA fingerprinting. Nucl. Acid Res. 23:4407-4414.
22. Weising, W., H. Nybom, K. Wolff, and W. Meyer. 1995. Applications of DNA fingerprinting in plants and fungi, p. 171-191. In DNA Fingerprinting in plants and fungi. CRC Press, Boca Raton, FL.
23. Welch, J., and M. McClelland. 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucl. Acid. Res. 18:7213-7218.
24. Williams, J.G.K., A.R. Kubelk, K.J. Livak, J.A. Rafalski, and S.V. Tingey. 1990. DNA polymorphism amplified by arbitrary primers are useful as genetic markers. Nucl. Acid. Res. 18:6231-6235.
25. Xiao, J., J. Li, L. Yuan, S.R. McCouch, and S.D. Tanksley. 1996. Genetic diversity and its relationship to hybrid performance and heterosis in rice as revealed by PCR-based markers. Theor. Appl. Genet. 92:637-643.
26. Zhou, Z., and J. P. Gustafson. 1995. Genetic variation detected by DNA fingerprinting with a rice minisatellite in Oryza sativa L. Theor. Appl. Genet. 91:481-488.