Genetic variation in Cylindrocladium floridanum and other morphologically similar Cylindrocladium species

Systematic and Applied Microbiology

Volumn 20, Issue 2, 1997, Pages 268-285

  Victor, D ^a   Crous, P W ^a   Janse, B J H ^a   Wingfield, M J ^b  

^a STELLENBOSCH UNIVERSITY   (South Africa)

^b UNIVERSITY OF THE FREE STATE   (South Africa)

Author keywords

AT DNA and RAPD polymorphisms; Calonectria ovata; Cylindrocladium curvisporum; Systematics

Indexed keywords

FUNGAL DNA;

ARTICLE; CLUSTER ANALYSIS; DNA POLYMORPHISM; FUNGAL GENETICS; FUNGUS GROWTH; GENE AMPLIFICATION; GENETIC VARIABILITY; MATING TYPE; MORPHOLOGY; MYCOLOGY; NONHUMAN; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SPECIES DIFFERENTIATION;

CALONECTRIA; CALONECTRIA KYOTENSIS; CALONECTRIA OVATA; CANDELABRUM; CYLINDROCLADIUM; CYLINDROCLADIUM CURVISPORUM; FUNGI;

EID: 0030813867     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0723-2020(97)80074-4     Document Type: Article

References (51)

1. ALFIERI, S. A., SEYMOUR, C. P., SOBERS, E. K.: Brown leaf necrosis of Mahonia bealei caused by Cylindrocladium ellipticum species nova. Phytopathology 60, 1212-1215 (1970).
2. BIDOCHKA, M. J., MCDONALD, M. A., ST. LEGER, R., ROBERTS, D. W.: Differentiation of species and strains of entomopathogenic fungi by random amplification of polymorphic DNA (RAPD). Curr. Genet. 25, 107-113 (1994).
3. BOESEWINKEL, H. J.: New plant disease records from New Zealand. Austral. Plant Pathol. 15, 18-21 (1986).
4. CHALMERS, K. J., WAUGH, R., SPRENT, J. I., SIMONS, A. J., POWELL, W.: Detection of genetic variation between and within populations of Gliricidia sepium and G. maculata using RAPD markers. Heredity 69, 465-472 (1992).
5. CODDINGTON, A., MATTHEWS, P. M., CULLIS, C., SMITH, K. H.: Restriction digest patterns of total DNA from different races of Fusarium oxysporum f. sp. pisi - an improved method for race classification. J. Phytopathol. 118, 9-20 (1987).
6. CROUS, P. W., ALFENAS, A. C., WINGFIELD, M. J.: Calonectria scoparia and Calonectria morganii sp. nov., and variation among isolates of their Cylindrocladium anamorphs. Mycol. Res. 97, 701-708 (1993 a).
7. CROUS, P. W., JANSE, B. J. H., VICTOR, D., MARAIS, G. F., ALFENAS, A. C.: Characterization of some Cylindrocladium species with three septate conidia using morphology, isozyme banding patterns and DNA polymorphisms. Syst. Appl. Microbiol. 16, 266-273 (1993 b).
8. CROUS, P. W., KORF, A., VAN ZYL, W. H.: Nuclear DNA polymorphisms of Cylindrocladium species with 1-septate conidia and clavate vesicles. System. Appl. Microbiol. 18, 244-250 (1995).
9. CROUS, P. W., PHILLIPS, A. J. L., WINGFIELD, M. J.: Effects of cultural conditions on vesicle and conidium morphology in species of Cylindrocladium and Cylindrocladiella. Mycologia 84, 497-504 (1992).
10. CROUS, P. W., WINGFIELD, M. J., ALFENAS, A. C.: Cylindrocladium parasiticum sp. nov., a new name for C. crotalariae. Mycol. Res. 97, 889-896 (1993 c).
11. CROUS, P. W., WINGFIELD, M. J.: A re-evaluation of Cylindrocladiella, and comparison with morphologically similar genera. Mycol. Res. 97, 433-448 (1993).
12. CROUS, P. W., WINGFIELD, M. J.: A monograph of Cylindrocladium including anamorphs of Calonectria. Mycotaxon 51, 341-435 (1994).
13. CROUS, P. W., SWART, W. J.: Foliicolous fungi of Eucalyptus spp. from Eastern Madagascar: Implications for South Africa. S. Afr. For. J. 172, 1-5 (1995).
14. CROWHURST, R. N., HAWTHORN, B. T., RIKKERINK, E. H. A., TEMPLETON, M. D.: Differentiation of Fusarium solani f. sp. cucurbitae races 1 and 2 by random amplification of polymorphic DNA. Curr. Genet. 20, 931-936 (1991).
15. EL-GHOLL, N. E., ALFENAS, A. C., CROUS, P. W., SCHUBERT, T. S.: Description and pathogenicity of Cylindrocladium ovatum sp. nov. Can. J. Bot. 71, 466-470 (1993).
16. FANG, G., HAMMER, S., GRUMET, R.: A quick and inexpensive method for removing polysaccharides from plant genomic DNA. Biotechniques 13, 52-55 (1992).
17. FISHER, N. L., BURGESS, L. W., TOUSSOUN, T. A., NELSON, P. E.: Carnation leaves as a substrate and for perserving cultures of Fusarium species. Phytopathology 72, 151-153 (1982).
18. FISHER, N. L., MARASAS, W. F. O., TOUSSOUN, T. A.: Taxonomic importance of microconidial chains in Fusarium section Liseola and effects of water potential on their formation. Mycologia 75, 151-153 (1983).
19. FÖRSTER, H., COFFEY, M. D.: Approaches to taxonomy of Phytophthora using polymorphisms in mitochondrial and nuclear DNA, pp. 164-183. In: Phytophthora. (J. A. LUCAS, R. C. SHATTOCK, D. S. SHAW, L. R. COOKE, eds.) British Mycological Society, Cambridge University Press, New York 1991
20. FREEMAN, S., PHAM, M., RODRIQUEZ, R. J.: Molecular genotyping of Colletotrichum species based on arbitrarily primed PCR, A + T-DNA, and nuclear DNA analysis. Exp. Mycol. 17, 309-322 (1993).
21. GABRIEL, D. W., HUNTER, J. E., KINGSLEY, M. T., MILLER, J. W., LAZO, G. R.: Clonal population structure of Xanthomonas campestris and genetic diversity among citrus canker strains. Mol. Plant-Microbe Interact. 1, 59-65 (1988).
22. GERLACH, W.: CALONECTRIA UNISEPTATA n. sp., die bisher unbekannte, Hauptfruchtform von Cylindrocladium scoparium Morgan. Phythopathol. Z. 61, 372-381 (1968).
23. GOODWIN, P. H., ANNIS, S. L.: Rapid identification of genetic variation and pathotype of Leptosphaeria maculans by random amplified polymorphic DNA assay. Appl. Environm. Microbiol. 57, 2482-2486 (1991).
24. GUTHRIE, P. A. I., MAGILL, C. W., FREDERIKSEN, R. A., ODVODY, G. N.: Random amplified polymorphic DNA markers: a system for identifying and differenciating isolates of Colletotrichum graminicola. Phytopathology 82, 832-835 (1992).
25. HAUSNER, G., REID, J., KLASSEN, G. R.: Grouping of isolates and species of Ceratocystis sensu lato on the basis of molecular and morphological characters, pp. 93-104. In: Ceratocystis and Ophiostoma taxonomy, ecology and pathogenicity. (M. J. WINGFIELD, K. A., SEIFERT, J. F. WEBBER, eds.) America: Phytopathological Society, St. Paul, Minnesota, U.S.A. 1993.
26. HWANG, B. K., DE COCK, A. W. A. M., BAHNWEG, G., PRELL, H. H., HEITEFUSS, R.: Restriction fragment length polymorphisms of Mitochondrial DNA among Phytophthora capsici isolates from peper (Capsicum annuum). System. Appl. Microbiol. 14, 111-116 (1991).
27. INNIS, M. A., GELFAND, D. H., SNINSKY, J. J., WHITE, T. J.: PCR protocols: a guide to methods and applications. Academic Press, San Diego 1990.
28. JUZWIK, J., TESTA, F.: Effect of cover crops on Cylindrocladium sp. in an Ontario bareroot nursery. Can. J. Bot. 21, 724-728 (1991).
29. KISTLER, H. C., MOMOL, E. A., BENNY, U.: Repetitive genomic sequences for determining relatedness among strains of Fusarium oxysporum. Phytopathology 81, 331-336 (1991).
30. KUHLMAN, E. G., CORDELL, C. E., FILER, T. H.: Cylindrocladium root rots of sweetgum seedlings in southern forest tree nurseries. Plant Dis. 64, 1979-1080 (1980).
31. LEUNG, H., LOOMIS, P., SHI, Y.: Differentiation of the wheat bunt fungus by random amplification of polymorphic DNA. Phytopathology 81, 1190 (1992).
32. MCDONALD, B. A., MARTINEZ, J. P.: DNA fingerprinting of the plant pathogenic fungus Mycosphaerella graminicola (anamorph Septoria tritici). Exp. Mycol. 15, 146-158 (1990).
33. MEIJER, G., MEGNEGNEAU, B., LINDERS, E. G. A.: Variability for isozyme, vegetative compatibility and RAPD markers in natural populations of Phomopsis subordinaria. Mycol. Res. 98, 267-276 (1994).
34. MORRISON, R. H., FRENCH, D. W.: Taxonomy of Cylindrocladium floridanum and C. scoparium. Mycologia 61, 957-965 (1969).
35. NEI, M., LI, W. H.: Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U.S.A. 76, 5269-5273 (1979).
36. NELSON, P. E., TOUSSOUN, T. A., MARASAS, W. F. O.: Fusarium species: an illustrated manual for identification. Pennsylvania State University Press, University Park, Pennsylvania 1983.
37. RAYNER, R. W.: A mycological colour chart. Kew, Surrey/England, CMI and British Mycological Society 1970.
38. REEVES, J. C., BALL, S. F. L.: Preliminary results on the identification of Pyrenophora species using DNA polymorphisms amplified from arbitrary primers. Plant Var. Seeds 4, 185-189 (1991).
39. ROSSMAN, A. Y.: The phragmosporous species of Nectria and related genera. Mycol. Pap. 150, 1-152 (1983).
40. SAMBROOK, J., FRITSCH, E. F., MANIATIS, T.: Molecular cloning: a laboratory manual. 2nd ed. Cold Spring Harbor/NY, Cold Spring Harbor Laboratory Press 1989.
41. SAMUELS, G. J., ROSSMAN, A. Y., LOWEN, R., ROGERSON, C. T.: A synopsis of Nectria subgen. Dialonectria. Mycol. Pap. 164, 1-48 (1991).
42. th ed.), Volume 1, Cary, NC: SAS Institute Inc. 1989.
43. SHARMA, J. K., MOHANAN, C., MARIA FLORENCE, E. J.: Nursery diseases of Eucalyptus in Kerala. Eur. J. Forest Pathol. 14, 77-89 (1984).
44. th ed.). The Iowa State University Press, Ames, Iowa, U.S.A. 1980.
45. SOBERS, E. K., SEYMOUR, C. P.: CYLINDROCLADIUM FLORIDANUM sp. n. associated with decline of peach trees in Florida. Phytopathology 57, 389-393 (1967).
46. SOBERS, E. K.: Morphology and pathogenicity of Calonectria floridana, Calonectria kyotensis and Calonectria uniseptata. Phytopathology 62, 485-487 (1972).
47. STEVENS, C., PALMER, M. A., TANG. A. Y., MCROBERTS, R. E.: Use of aminopeptidase substrate specificities to identify species of Cylindrocladium in Wisconsin nurseries. Mycologia 82, 436-443 (1990).
48. STRONGMAN, D. B., MACKAY, R. M.: Discrimination between Hirsutella longicolla var. longicolla and Hirsutella longicolla var. cornuta using random amplified polymorphic DNA fingerprinting. Mycologia 85, 65-70 (1993).
49. TERASHITA, T.: A new species of Calonectria and its conidial state. Trans. Mycol. Soc. Japan 8, 124-129 (1968).
50. WANG, C. L., JENG, R. S., HUBBES, M.: Identification of Cylindrocladium isolates by nuclear DNA fingerprinting and mitochondrial DNA RFLPs. Abstracts of the sixth international congress of plant pathology, Montreal, Canada, p. 172 (1993).
51. ZIMAND, G., VALINSKY, L., ELAD, Y., CHET, I., MANULIS, S.: Use of the RAPD procedure for the identification of Trichoderma strains. Mycol. Res. 98, 531-534 (1994).