Comparative study of Mycobacterium paratuberculosis strains isolated from Crohn's disease and Johne's disease using restriction fragment length polymorphism and arbitrarily primed polymerase chain reaction

Epidemiology and Infection

Volumn 118, Issue 3, 1997, Pages 227-233

  Francois B ^a,b   Krishnamoorthy, R ^a   Elion, J ^a  

^a HÔPITAL ROBERT DEBRÉ   (France)

^b INSTITUT PASTEUR   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIUM ISOLATION; CATTLE DISEASE; CROHN DISEASE; DNA DETERMINATION; ENTERITIS; GENE INSERTION SEQUENCE; HUMAN; MYCOBACTERIUM PARATUBERCULOSIS; NONHUMAN; PARATUBERCULOSIS; POLYMERASE CHAIN REACTION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SHEEP;

ANIMALS; BLOTTING, SOUTHERN; CATTLE; CROHN DISEASE; DNA PRIMERS; DNA, BACTERIAL; HUMANS; MYCOBACTERIUM PARATUBERCULOSIS; PARATUBERCULOSIS; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH;

EID: 0030793069     PISSN: 09502688     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0950268897007486     Document Type: Article

References (28)

1. Yoshimura HH, Graham DY. Nucleic acid hybridization studies of mycobactin-dependent mycobacteria. J Clin Microbiol 1988; 26: 1309-12.
2. Thorel MF, Krichevsky M, Levy-Frébault VV. Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov. Int Syst Bacteriol 1990; 40: 254-60.
3. Merkal RS. Proposal of ATCC 19698 as the neotype strain of Mycobacterium paratuberculosis Bergey et al. 1923. Int J Syst Bacteriol 1979; 29: 263-4.
4. Green EP, Tizard MLV, Moss MT, et al. Sequence and characteristics of IS 900, an insertion element identified in a human Crohn's disease isolate of Mycobacterium paratuberculosis. Nucl Acids Res 1989; 17: 9063-73.
5. Chiodini RJ, Van Kruiningen HJ, Merkal RS, Thayer WR, Coutu JR, Coutu JA. Characteristics of an unclassified Mycobacterium species isolated from patients with Crohn's disease. J Clin Microbiol 1984; 20: 966-71.
6. Graham YD, Markesich DC, Yoshimura HH. Mycobacteria and inflammatory bowel disease. Results of culture. Gastroenterology 1987; 92: 436-42.
7. McFadden JJ, Butcher PD, Chiodini R, Hermon-Taylor J. Crohn's disease-isolated mycobacteria are identical to Mycobacterium paratuberculosis, as determined by DNA probes that distinguish between mycobacterial species. J Clin Microbiol 1987; 25: 796-801.
8. Yoshimura HH, Graham YD, Estes MK, Merkal RS. Investigation of association of mycobacteria with inflammatory bowel disease by nucleic acid hybridization. J Clin Microbiol 1987; 25: 45-51.
9. Wall S, Kunze ZM, Saboor S, et al. Identification of spheroplast-like agents isolated from tissues of patients with Crohn's disease and control tissues by polymerase chain reaction. J Clin Microbiol 1993; 31: 1241-5.
10. Moss MT, Sanderson JD, Tizard MLV, et al. Polymerase chain reaction detection of Mycobacterium paratuberculosis, and Mycobacterium avium subsp. silvaticum in long term cultures from Crohn's disease and control tissues. Gut 1992; 33: 1209-13.
11. Sanderson JD, Moss MT, Tizard MLV, Hermon-Taylor J. Mycobacterium paratuberculosis DNA in Crohn's disease tissue. Gut 1992; 33; 890-6.
12. Dell'Isola B, Poyart C, Goulet O, et al. Detection of Mycobacterium paratuberculosis by polymerase chain reaction in children with Crohn's disease. J Infect Dis 1994; 169: 449-51.
13. Fidler HM, Thurrell W, Johnson NMc, Rook GAW, McFadden JJ. Specific detection of Mycobacterium paratuberculosis, DNA associated with granulomatous tissue in Crohn's disease. Gut 1994; 35: 506-10.
14. Collins DM, Gabric DM, de Lisle GW. Identification of two groups of Mycobacterium paratuberculosis strains by restriction endonuclease analysis and DNA hybridization. J Clin Microbiol 1990; 28: 1591-6.
15. Cave H, Bingen E, Elion J, Denamur E. Differentiation of Escherichia coli strains using randomly amplified polymorphic DNA analysis. Res Microbiol 1994; 145: 141-50.
16. Whipple D, Kapke P, Vary C. Identification of restriction fragment length polymorphisms in DNA from Mycobacterium paratuberculosis. J Clin Microbiol 1990; 28: 2561-4.
17. Bose M, Chander A, Das RH. A rapid and gentle method for the isolation of genomic DNA from mycobacteria. Nucl Acids Res 1993; 21: 2529-30.
18. Welsh J, McClelland M. Fingerprinting genomes using PCR with arbitrary primers. Nucl Acids Res 1990; 18: 7213-8.
19. Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl Acids Res 1990; 18: 6531-5.
20. Welsh J, Petersen C, McClelland. Polymorphisms generated by arbitrarily primed PCR in the mouse: application to strain identification and genetic mapping. Nucl Acids Res 1991 ; 189: 303-6.
21. Kwok S, Kellogg DE, McKinney N, et al. Effect of primer-template mismatches on the polymerase chain reaction: Human Immunodeficiency Virus type 1 model studies. Nucl Acids Res 1990; 18: 999-1005.
22. Whipple DL, Lefebvre RB, Andrews RE, Thiermann JR, Thiermann AB. Isolation and analysis of restriction endonuclease digestive patterns of chromosomal DNA from Mycobacterium paratuberculosis and other mycobacterium species. J Clin Microbiol 1987: 25: 1511-5.
23. McFadden JJ, Butcher PD, Thompson J, Chiodini R, Hermon-Taylor J. The use of DNA probes identifying restriction-fragment-length polymorphisms to examine the Mycobacterium avium complex. Mol Microbiol 1987; 1: 283-91.
24. Levy-Frébault VV, Thorel MF, Varnerot A, Gicquel B. DNA polymorphism in Mycobacterium paratuberculosis, 'Wood pigeon mycobacteria', and related mycobacteria analyzed by field inversion gel electrophoresis. J Clin Microbiol 1989; 27: 2823-6.
25. Elsaghier A, Prantera C, Bothamley G, Wilkins E, Jindal S, Ivanyi J. Disease association of antibodies to human and mycobacterial hsp 70 and hsp 60 stress proteins. Clin Exp Immunol 1992; 89: 305-9.
26. Cappello M, Keshav S, Prince C, Jewell DP, Gordon S. Detection of mRNAs for macrophage products in inflammatory bowel disease by in situ hybridization. Gut 1992; 33: 1214-9.
27. Retzlaff C, Yomamoto Y, Hoffman PS, Friedman H, Klein TW. Bacterial heat shock proteins directly induce cytokine mRNA and interleukine-1 secretion in macrophage cultures. Infect Imm 1994; 62: 5689-93.
28. Gilberts ECA, Greenstein AJ, Katsel P, Harpaz N, Greenstein RJ. Molecular evidence for two forms of Crohn's disease. Proc Nat Acad Sci USA 1994; 91: 12721-4.