Cloning, structural analysis, and mapping of the B30 and B7 multigenic families to the major histocompatibility complex (MHC) and other chromosomal regions

Immunogenetics

Volumn 46, Issue 5, 1997, Pages 383-395

  Henry, J ^a   Ribouchon, M T ^a   Depetris, D ^b   Mattei M G ^b   Offer, C ^a   Tazi Ahnini, R ^a   Pontarotti, P ^b  

^a CHU PURPAN   (France)

^b INSERM   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; EXON; GENE MAPPING; GENE STRUCTURE; HUMAN; MAJOR HISTOCOMPATIBILITY COMPLEX; MOLECULAR CLONING; MULTIGENE FAMILY; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL;

AMINO ACID SEQUENCE; BASE SEQUENCE; CHROMOSOME MAPPING; CHROMOSOMES, ARTIFICIAL, YEAST; CHROMOSOMES, HUMAN, PAIR 6; EVOLUTION, MOLECULAR; EXONS; GENOMIC LIBRARY; HISTOCOMPATIBILITY ANTIGENS; HLA-B7 ANTIGEN; HUMANS; MAJOR HISTOCOMPATIBILITY COMPLEX; MEMBRANE GLYCOPROTEINS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 0030792643     PISSN: 00937711     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002510050292     Document Type: Article

References (39)

1. Altschul, S.F., Gish, W., Miller, W., Myers, E.W., and Lipman, D. Basic local alignment search tool. J Mol Biol 215: 403-410, 1990
2. Amadou, C., Ribouchon, M.T., Mattei, M.G., Jenkins, N.A., Gilbert, D.J., Copeland, N.G., Avoustin, P., and Pontarotti, P. Localization of new genes and markers to the distal part of the human major histocompatibility complex (MHC) region comparison with the mouse: new insights into the evolution of mammalian genomes. Genomics 26: 9-20, 1995
3. Bajorath, J., Peach, R.J., and Linsley, P.S. Immunoglobulin fold characteristics of B7-1 (CD80) and B7-2 (CD86). Protein Sci 3: 2148-2150, 1994
4. Bento Soares, M., Bonaldo, MDF, Jelene, P., Su, L., Lawton, L., and Efstratiadis, A. Construction and characterization of a normalized cDNA library. Proc Natl Acad Sci USA 91: 9228-9332, 1994
5. Borriello, F., Freeman, G.J., Edelhoff, S., Disteche, C.M., Nadler, L.M., and Sharpe, A.H. Characterization of the murine B7-1 genomic locus reveals an additionel exon encoding an alternative cytoplasmic domain and a chromosomal location of chromosome 16 band B5. J Immunol 153: 5038-5048, 1994
6. Borriello, F., Oliveros, J., Freeman, G.J., Nadler, L.M., and Sharpe, A.H. Differential expression of alternate mB7-2 transcripts. J Immunol 155: 5490-5497, 1995
7. Campbell, R.D. and Trowsdale J. Map of the human MHC. Immunol Today 14: 349-352, 1994
8. Chan, E.K.L., Di Donato, F., Hamel, J.C., Buyon, J.P., and Buyon, J.P. 52-kD SS-A/Ro: genomic structure and identification of an alternatively spliced transcript encoding a novel leucine Zipper-minus autoantigen expressed in fetal and adult heart. J Exp Med 182: 983-992, 1995
9. Chu, T.W., Capossela, A., Coleman, R., Goei, V.L., Nallur, G., and Gruen, J.R. Cloning of a new "Finger" protein gene (ZNF173) within the class I region of the human MHC. Genomics 29: 229-239, 1995
10. Daubas, P., Pham-Dinh, D., and Dautigny, A. Structure and polymorphism of the mouse myelin/oligodendrocyte glycoprotein. Genomics 23: 36-41, 1994
11. El Kahloun, A., Chauvel, B., Mauvieux, V., Dorval, I., Jouanolle, A. M., Gicquel, I., Le Gall, JY., and David, D. Localization of seven new genes around the HLA-A locus. Hum Mol Genet 2: 55-60, 1993
12. Frank, M.B., Itoh, K., Fujisaku, A., Pontarotti, P., Matteï, M.G., and Neas, B.R. The mapping of the human 52Kd Ro/SSa autoantigen gene to human chromosome 11 and its polymorphisms. Am J Hum Genet 52: 183-191, 1993
13. Felsentein, J. PHYLIP (Phylogeny inference package, version 3.5C), distributed by the author. Department of Genetics. University of Washington, Seattle, 1994
14. Fernandez-Ruiz, E., Somoza, C., Sanchez-Madrid, F., and Lanier, L.L. CD28/CTLA4 ligands: the gene encoding CD86 (B70/B7.2) maps to the same region as CD80 (B7/B7.1) gene in human chromosome 3q13-23. Eur J Immunol 25: 1453-1456, 1995
15. Frigerio, J.M., Berthezene, P., Garrido, P., Oriz, E., Barthellemy, S., Vasseur, S., Sastre, B., Selesneff, I., Dagorn, JC., and Iovana, J.L. Analysis of 2166 clonesd from a human colorectal cancer cDNA library by partial sequencing. Hum Mol Genet 4: 37-43, 1995
16. Freeman, G.J., Disteche, C.M., Gribble, J.G., Adler, D.A., and Freedman, A.S. The gene for B7 costimulatiory signal for T cell activation maps to chromosomal region 3q13.3-3q21. Blood 79: 489-494, 1992
17. Gardinier, M.V., Amiguet, P., Linington, C., and Matthieu, J.M. Myelin/oligodendrocyte glycoprotein is a unique member of the immunoglobulin superfamily. J Neurosci Res 33: 177-187, 1992
18. Ishii, T., Aoki, N., Noda, A., Adachi, T., Nakamura, R., and Matsutada, T. Carboxy-terminal cytoplasmic domain of mouse butyrophilin specifically associates with a 150-kDa protein of mammary epithelial cells and milk fat globule membrane. Biochem Biophys Acta 1245: 285-292, 1995
19. Isono, T. and Seto, A. Cloning and sequencing of the rabbit gene encoding T-cell costimulatory molecules. Immunogenetics 42: 217-220, 1995
20. Jellis, C.L., Wang, S.S., Rennert, P., Borriello, F., Sharpe, A.H., Green, N.R., and Gray, G.S. Genomics organization of the gene coding for the costimulatory human B-lymphocyte antigen B7-2 (CD86). Immunogenetics 36: 175-186, 1995
21. Jack, L.J.W. and Mather, I.H. Cloning and analysis of cDNA encoding bovine butyrophilin. an apical glycoprotein expressed in mammary tissue and secreted in association with the milk-fat globule membrane during lactation. J Biol Chem 265: 14481-14486, 1990
22. Kozak, M. Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eucaryotic ribosomes. Cell 44: 283-292, 1986
23. Lehrach, H. Genetic and physical mapping. In K. Davies and S.M. Tilgman (eds.): Genome Analysis, pp. 39-18, Cold Spring Harbor Laboratory, Cold Spring Harbor, 1990
24. Linsley, P.S., Peach, R., Gladstone, P., and Bajortah, J. Extending the B7 (CD80) gene family. Protein Sci 3: 1341-1343, 1994
25. Maniatis, T., Fritsch, E.F., and Sambrook, J. Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, 1982
26. Matte, M.G., Philip, N., Passage, E., Moisan, JP., Mandel, J.L., and Matteï, J.F. DNA probe localization at 18p113 band in situ hybridization and identification of a small supernumerary chromosome. Hum Genet 69: 268-271, 1985
27. Miller, M.M., Goto, R., Young, S., Chirivella, J., Hawke, D., and Miyada, G. Immunoglobulin variable-region-like domains of diverse sequence within the major histocompatibility complex of the chicken. Proc Natl Acad Sci USA 88: 4377-4381, 1991
28. Milosavljevic, A. Repeat analysis. Imperial Cancer Research Fund Handbook of Genome Analysis, Blackwell Scientific Publications, Oxford, in press
29. Murphy, P.M. Molecular mimicry and the generation of host defense protein diversity. Cell 72: 675-684, 1993
30. Ogg, S. L., Komaragiri, M.V.S, and Mather, I.H. Structural organization and mammary-specific expression of the butyrophilin gene. Mamm Genome 7: 900-905, 1996
31. Roth, M.P., Malfroy, L., Offer, C., Sevin, J., Enault, G., Borot, N., Pontarotti, P., and Coppin, H. The human myelin-oligodendrocyte glycoprotein (MOG) gene: complete nucleotide sequence and structural characterization. Genomics 28: 241-250, 1995
32. Saurin, J.A., Borden, K.L., Boddy, M.N., and Freemont, P.S. Does this have a familiar RING? Trends Biochem Sci 21: 208-214, 1995
33. Selvakumar, A., Mohanraj, B.K., Eddy, R.L., Shows, T.B., White, P.C., and Dupont, B. Genomic organization and chromosomal location of the human gene encoding the B-lymphocyte activation antigen B7. Immunogenetics 36: 175-186, 1992
34. Taylor, M.R., Peterson, J.A., Ceriani, R.L., and Coutou, J.R. Cloning and sequence analysis of human butyrophilin reveals a potential receptor function. Biochim Biophys Acta 1306: 1-4, 1996
35. Tissot, C. and Metchi, N. Molecular cloning of a new interferon-induced factor that represses human immunodeficiency virus Type 1 long terminal repeat expression. J Biol Chem 270: 14891-14898, 1995
36. Tissot, C., Taviaux, S.A., Diriong, S., and Metchi, N. Localization of Staf 50, a member of the RING Finger family, to the 11p15 by fluorescence in situ hybridization. Genomics 34: 151-153, 1996
37. Uberbacher, E.C. and Mural, R.J. Locating protein-coding regions in human DNA sequences by a multiple sensor-neural network approach. Proc Natl Acad Sci USA 88: 11261-11265, 1991
38. Vernet, C., Boretto, J., Matteï, M., Takashi, M., Jack, L.J.W., Mather, I.H., Rouquier, S., and Pontarotti, P. Evolutionary study of multigenic families mapping close to the human MHC class I region. J Mol Evol 37: 600-612, 1993
39. Xu, Y., Einstein, J.R., Mural, R.J., Shah, M., and Uberbacher, E.C. An improved system for exon recognition and gene modeling in human DNA sequences. Ismb 2: 376-384, 1994