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Volumn 24, Issue 1, 1997, Pages 25-35

A molecular structure matching problem

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER SIMULATION; HEURISTIC METHODS; MOLECULAR STRUCTURE; OPTIMIZATION; PROBLEM SOLVING; SIMULATED ANNEALING; STATISTICAL METHODS;

EID: 0030787231     PISSN: 03050548     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0305-0548(96)00030-5     Document Type: Article
Times cited : (3)

References (25)
  • 1
    • 84986483824 scopus 로고
    • Powerful simulated-annealing algorithm locates global minimum of protein-folding potentials from multiple starting conformations
    • Snow, M. E., Powerful Simulated-Annealing Algorithm Locates Global Minimum of Protein-Folding Potentials from Multiple Starting Conformations,. J. of Computational Chemistry, 1992, 13, 579-584.
    • (1992) J. of Computational Chemistry , vol.13 , pp. 579-584
    • Snow, M.E.1
  • 2
    • 84986486657 scopus 로고
    • Efficient search for all low energy conformations of polypeptides by Monte Carlo search methods
    • von Freyberg, B. and Braun, W., Efficient Search for all Low Energy Conformations of Polypeptides by Monte Carlo Search Methods,. J. of Computational Chemistry, 1991, 12, 1065-1076.
    • (1991) J. of Computational Chemistry , vol.12 , pp. 1065-1076
    • Von Freyberg, B.A.1    Braun, W.2
  • 4
    • 0026233692 scopus 로고
    • Techniques for the calculation of three-dimensional structural similarity using inter-atomic distances
    • Pepperrell, C. A. and Willett, P., Techniques for the Calculation of Three-Dimensional Structural Similarity Using Inter-Atomic Distances,. J. of Computer Aided Molecular Design, 1991, 5, 455-474.
    • (1991) J. of Computer Aided Molecular Design , vol.5 , pp. 455-474
    • Pepperrell, C.A.1    Willett, P.2
  • 5
    • 0025490862 scopus 로고
    • Molecular structure matching by simulated annealing. I.A comparison between different cooling schedules
    • Barakat, M. T. and Dean, P. M., Molecular Structure Matching by Simulated Annealing. I.A Comparison Between Different Cooling Schedules,. J. of Computer-Aided Molecular Design, 1990, 4, 295-316.
    • (1990) J. of Computer-Aided Molecular Design , vol.4 , pp. 295-316
    • Barakat, M.T.1    Dean, P.M.2
  • 6
    • 0041496732 scopus 로고
    • Molecular recognition: The measurement and search for molecular similarity in ligand-receptor interaction
    • eds M. Johnson and G. Maggiora. Wiley, New York
    • Dean, P. M., Molecular Recognition: the measurement and search for molecular similarity in ligand-receptor interaction. In Concepts and Applications of Molecular Similarity, eds M. Johnson and G. Maggiora. Wiley, New York, 1990, pp. 211-237.
    • (1990) Concepts and Applications of Molecular Similarity , pp. 211-237
    • Dean, P.M.1
  • 8
    • 0025487893 scopus 로고
    • Molecular structure matching by simulated annealing. II. An exploration of the evolution of configuration landscape problems
    • Barakat, M. T. and dean, P. M., Molecular structure matching by simulated annealing. II. an exploration of the evolution of configuration landscape problems,. J. of Computer-Aided Molecular Design, 1990, 4, 317-330.
    • (1990) J. of Computer-Aided Molecular Design , vol.4 , pp. 317-330
    • Barakat, M.T.1    Dean, P.M.2
  • 9
    • 0026145969 scopus 로고
    • Molecular structure matching by simulated annealing. III. The incorporation of null correspondences into the matching problem
    • Barakat, M. T. and Dean, P. M., Molecular structure matching by simulated annealing. III. The incorporation of null correspondences into the matching problem,. J. of Computer-Aide Molecular Design, 1991, 5, 107-117.
    • (1991) J. of Computer-Aide Molecular Design , vol.5 , pp. 107-117
    • Barakat, M.T.1    Dean, P.M.2
  • 10
    • 0000771519 scopus 로고
    • An alternating projection algorithm for computing the nearest euclidean distance matrix
    • Glunt, W., Hayden, T. L., Hong, S. and Wells, J., An alternating projection algorithm for computing the nearest euclidean distance matrix,. SIAM J. Matrix Analysis and Applications, 1990, 11, 589-600.
    • (1990) SIAM J. Matrix Analysis and Applications , vol.11 , pp. 589-600
    • Glunt, W.1    Hayden, T.L.2    Hong, S.3    Wells, J.4
  • 13
    • 0027238108 scopus 로고
    • A computer vision based technique for 3-D sequence-independent structural comparison of proteins
    • Bachar, O., Fischer, D., Nussinov, R. and Wolfson, H., A computer vision based technique for 3-D sequence-independent structural comparison of proteins,. Protein Engineering, 1993, 6, 279-288.
    • (1993) Protein Engineering , vol.6 , pp. 279-288
    • Bachar, O.1    Fischer, D.2    Nussinov, R.3    Wolfson, H.4
  • 14
    • 0027440362 scopus 로고
    • Protein structure comparison by alignment of distance matrices
    • Holm, L. and Sandor, C., Protein structure comparison by alignment of distance matrices. J. Molecular Biology, 1993, 233, 123-138.
    • (1993) J. Molecular Biology , vol.233 , pp. 123-138
    • Holm, L.1    Sandor, C.2
  • 15
    • 0020442184 scopus 로고
    • Crystal structures of Escherichia Coli and Lactobacillus Casei diydrofolate reductase refined at 1.7 angstroms resolution: Environment of bound NADPH and implications for catalysis
    • Filman, D. J., Bolin, J. T., Matthews, D. A. and Kraut, J., Crystal structures of Escherichia Coli and Lactobacillus Casei diydrofolate reductase refined at 1.7 angstroms resolution: environment of bound NADPH and implications for catalysis. J. of Biol. Chem., 1982, 257, 13663.
    • (1982) J. of Biol. Chem. , vol.257 , pp. 13663
    • Filman, D.J.1    Bolin, J.T.2    Matthews, D.A.3    Kraut, J.4
  • 17
    • 0024770085 scopus 로고
    • Optimization by simulated annealing: An experimental evaluation. Part I, graph partitioning
    • Johnson, D. S., Aragon, C. R., McGeoch, L. A. and Schevon, C., Optimization by simulated annealing: an experimental evaluation. Part I, graph partitioning. Operations Research, 1989, 37, 865-893.
    • (1989) Operations Research , vol.37 , pp. 865-893
    • Johnson, D.S.1    Aragon, C.R.2    McGeoch, L.A.3    Schevon, C.4
  • 18
    • 0000411214 scopus 로고
    • Tabu search, part I
    • Glover, F., Tabu Search, Part I. ORSA J. on Computing, 1989, 1, 190-206.
    • (1989) ORSA J. on Computing , vol.1 , pp. 190-206
    • Glover, F.1
  • 20
    • 0004267646 scopus 로고
    • Princeton University Press, Princeton, New Jersey
    • Rockafellar, T., Convex Analysis. Princeton University Press, Princeton, New Jersey, 1972.
    • (1972) Convex Analysis
    • Rockafellar, T.1
  • 21
    • 0001997908 scopus 로고
    • Tabu search applied to the quadratic assignment problem
    • Skorin-Kapov, J., Tabu search applied to the quadratic assignment problem. ORSA J. of Computing, 1990, 2, 33-45.
    • (1990) ORSA J. of Computing , vol.2 , pp. 33-45
    • Skorin-Kapov, J.1
  • 22
    • 0002703574 scopus 로고
    • Tabu search: A tutorial
    • Glover, F., Tabu search: a tutorial. INTERFACES, 1990, 20, 74-94.
    • (1990) INTERFACES , vol.20 , pp. 74-94
    • Glover, F.1
  • 23
    • 0001009535 scopus 로고
    • The damper placement problem on space truss structures
    • Kincaid, R. K. and Berger, R. T., The damper placement problem on space truss structures. Location Sci., 1993, 1, 219-234.
    • (1993) Location Sci. , vol.1 , pp. 219-234
    • Kincaid, R.K.1    Berger, R.T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.