메뉴 건너뛰기




Volumn 73, Issue 5, 1997, Pages 2337-2346

Predicting the structure of apolipoprotein A-I in reconstituted high- density lipoprotein disks

Author keywords

[No Author keywords available]

Indexed keywords

APOLIPOPROTEIN A1; HIGH DENSITY LIPOPROTEIN; MEMBRANE LIPID; PHOSPHATIDYLCHOLINE; PROLINE; WATER;

EID: 0030786781     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(97)78264-X     Document Type: Article
Times cited : (121)

References (54)
  • 1
    • 0016821434 scopus 로고
    • The primary structure of human plasma high density apolipoprotein glutamine I (ApoA-I)
    • Baker, H. N., A. M. Gotto, Jr., and R. L. Jackson. 1975. The primary structure of human plasma high density apolipoprotein glutamine I (ApoA-I). J. Biol. Chem. 250:2725-2738.
    • (1975) J. Biol. Chem. , vol.250 , pp. 2725-2738
    • Baker, H.N.1    Gotto Jr., A.M.2    Jackson, R.L.3
  • 2
    • 0028863204 scopus 로고
    • Apolipoprotein A-I conformation in reconstituted discoidal lipoproteins varying in phospholipid and cholesterol content
    • Bergeron, J., P. G. Frank, D. Scales, Q.-H. Meng, G. Castro, and Y. L. Marcel. 1995. Apolipoprotein A-I conformation in reconstituted discoidal lipoproteins varying in phospholipid and cholesterol content. J. Biol. Chem. 270:27429-27438.
    • (1995) J. Biol. Chem. , vol.270 , pp. 27429-27438
    • Bergeron, J.1    Frank, P.G.2    Scales, D.3    Meng, Q.-H.4    Castro, G.5    Marcel, Y.L.6
  • 3
    • 0023002101 scopus 로고
    • On computer-assisted analysis of biological sequences: Proline punctuation, consensus sequences, and apolipoprotein repeats
    • Boguski, M. S., M. Freeman, N. A. Elshourbagy, J. M. Taylor, and J. I. Gordon. 1986. On computer-assisted analysis of biological sequences: proline punctuation, consensus sequences, and apolipoprotein repeats. J. Lipid. Res. 27:1011-1034.
    • (1986) J. Lipid. Res. , vol.27 , pp. 1011-1034
    • Boguski, M.S.1    Freeman, M.2    Elshourbagy, N.A.3    Taylor, J.M.4    Gordon, J.I.5
  • 4
    • 0030732162 scopus 로고    scopus 로고
    • Crystal structure of truncated human apolipoprotein A-I suggests a lipid-bound conformation
    • In press
    • Borhani, D. W., D. P. Rogers, J. A. Engler, and C. G. Brouillette. 1997. Crystal structure of truncated human apolipoprotein A-I suggests a lipid-bound conformation. Proc. Natl. Acad. Sci. USA. In press.
    • (1997) Proc. Natl. Acad. Sci. USA
    • Borhani, D.W.1    Rogers, D.P.2    Engler, J.A.3    Brouillette, C.G.4
  • 8
    • 0000246042 scopus 로고
    • Simulated annealing in crystallography
    • Brünger, A. 1991. Simulated annealing in crystallography. Annu. Rev. Phys. Chem. 42:197-223.
    • (1991) Annu. Rev. Phys. Chem. , vol.42 , pp. 197-223
    • Brünger, A.1
  • 9
    • 0003769049 scopus 로고
    • The Howard Hughes Medical Institute and Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT
    • Brünger, A. T. 1992. X-PLOR, Version 3.1: A System for X-ray Crystallography and NMR. The Howard Hughes Medical Institute and Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT.
    • (1992) X-PLOR, Version 3.1: A System for X-ray Crystallography and NMR
    • Brünger, A.T.1
  • 10
    • 84901961522 scopus 로고
    • Slow-cooling protocols for crystallographic refinement by simulated annealing
    • Brünger, A. T., A. Krukowski, and J. Erickson. 1990. Slow-cooling protocols for crystallographic refinement by simulated annealing. Acta Crystallogr. A46:585-593.
    • (1990) Acta Crystallogr. , vol.A46 , pp. 585-593
    • Brünger, A.T.1    Krukowski, A.2    Erickson, J.3
  • 11
    • 0031575810 scopus 로고    scopus 로고
    • Activation of lecithin cholesterol acyltransferase by a disulfide-linked apolipoprotein A-I dimer
    • Calabresi, L., G. Franceschini, A. Burkybile, and A. Jonas. 1997. Activation of lecithin cholesterol acyltransferase by a disulfide-linked apolipoprotein A-I dimer. Biochem. Biophys. Res. Commun. 232:345-349.
    • (1997) Biochem. Biophys. Res. Commun. , vol.232 , pp. 345-349
    • Calabresi, L.1    Franceschini, G.2    Burkybile, A.3    Jonas, A.4
  • 12
    • 0027256738 scopus 로고
    • Realistic simulations of native-protein dynamics in solution and beyond
    • Daggett, V., and M. Levitt. 1993. Realistic simulations of native-protein dynamics in solution and beyond. Annu. Rev. Biophys. Biomol. Struct. 22:353-380.
    • (1993) Annu. Rev. Biophys. Biomol. Struct. , vol.22 , pp. 353-380
    • Daggett, V.1    Levitt, M.2
  • 14
    • 0028264378 scopus 로고
    • The molecular basis for the difference in charge between pre-β- And α-migrating high density lipoproteins
    • Davidson, W. S., D. L. Sparks, S. Lund-Katz, and M. C. Phillips. 1994. The molecular basis for the difference in charge between pre-β- and α-migrating high density lipoproteins. J. Biol. Chem. 269:8959-8965.
    • (1994) J. Biol. Chem. , vol.269 , pp. 8959-8965
    • Davidson, W.S.1    Sparks, D.L.2    Lund-Katz, S.3    Phillips, M.C.4
  • 15
    • 0022510143 scopus 로고
    • Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins
    • Engelman, D. M., T. A. Steitz, and A. Goldman. 1986. Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins. Annu. Rev. Biophys. Biophys. Chem. 15:321-353.
    • (1986) Annu. Rev. Biophys. Biophys. Chem. , vol.15 , pp. 321-353
    • Engelman, D.M.1    Steitz, T.A.2    Goldman, A.3
  • 16
    • 0026320866 scopus 로고
    • The energy landscapes and motions of proteins
    • Frauenfelder, H., and S. G. Sligar. 1991. The energy landscapes and motions of proteins. Science. 254:1598-1603.
    • (1991) Science , vol.254 , pp. 1598-1603
    • Frauenfelder, H.1    Sligar, S.G.2
  • 17
    • 0017873321 scopus 로고
    • Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins
    • Garnier, J., D. Osguthorpe, and B. Robson. 1978. Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J. Mol. Biol. 120:97-120.
    • (1978) J. Mol. Biol. , vol.120 , pp. 97-120
    • Garnier, J.1    Osguthorpe, D.2    Robson, B.3
  • 18
    • 0001008704 scopus 로고
    • Molecular dynamics simulation of a bilayer of 200 lipids in the gel and in the liquid crystal phases
    • Heller, H., M. Schaefer, and K. Schulten. 1993. Molecular dynamics simulation of a bilayer of 200 lipids in the gel and in the liquid crystal phases. J. Phys. Chem. 97:8343-8360.
    • (1993) J. Phys. Chem. , vol.97 , pp. 8343-8360
    • Heller, H.1    Schaefer, M.2    Schulten, K.3
  • 19
    • 0000268209 scopus 로고
    • Protein secondary structure prediction with a neural network
    • Holley, L. H., and M. Karplus. 1989. Protein secondary structure prediction with a neural network. Proc. Natl. Acad. Sci. USA. 86:152-156.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 152-156
    • Holley, L.H.1    Karplus, M.2
  • 21
    • 0029153599 scopus 로고
    • Predicting the structure of the light-harvesting complex II of Rhodospirillum molischianum
    • Hu, X., D. Xu, K. Hamer, K. Schulten, J. Köpke, and H. Michel. 1995. Predicting the structure of the light-harvesting complex II of Rhodospirillum molischianum. Protein Sci. 4:1670-1682.
    • (1995) Protein Sci. , vol.4 , pp. 1670-1682
    • Hu, X.1    Xu, D.2    Hamer, K.3    Schulten, K.4    Köpke, J.5    Michel, H.6
  • 23
    • 0029048822 scopus 로고
    • Properties of an N-terminal proteolytic fragment of apolipoprotein A-I in solution and in reconstituted high density lipoproteins
    • Ji. Y., and A. Jonas. 1995. Properties of an N-terminal proteolytic fragment of apolipoprotein A-I in solution and in reconstituted high density lipoproteins. J. Biol. Chem. 270:11290-11297.
    • (1995) J. Biol. Chem. , vol.270 , pp. 11290-11297
    • Ji, Y.1    Jonas, A.2
  • 25
    • 0022556101 scopus 로고
    • Reconstitution of high-density lipoproteins
    • Jonas, A. 1986. Reconstitution of high-density lipoproteins. Methods Enzymol. 128:553-582.
    • (1986) Methods Enzymol. , vol.128 , pp. 553-582
    • Jonas, A.1
  • 26
    • 0002986569 scopus 로고
    • Lipid-binding properties of apolipoproteins
    • M. Rosseneu, editor. CRC Press, Boca Raton, FL
    • Jonas, A. 1992, Lipid-binding properties of apolipoproteins. In Structure and Function of Apolipoproteins. M. Rosseneu, editor. CRC Press, Boca Raton, FL. 217-250.
    • (1992) Structure and Function of Apolipoproteins , pp. 217-250
    • Jonas, A.1
  • 27
    • 0024523877 scopus 로고
    • Defined apolipoprotein A-I conformations in reconstituted high density lipoprotein discs
    • Jonas, A., K. E. Kezdy, and J. H. Wald. 1989. Defined apolipoprotein A-I conformations in reconstituted high density lipoprotein discs. J. Biol. Chem. 264:4818-4824.
    • (1989) J. Biol. Chem. , vol.264 , pp. 4818-4824
    • Jonas, A.1    Kezdy, K.E.2    Wald, J.H.3
  • 28
    • 0025648850 scopus 로고
    • Apolipoprotein A-I structure and lipid properties in homogeneous reconstituted spherical and discoidal high density lipoproteins
    • Jonas, A., J. H. Wald, K. L. H. Toohill, E. S. Krul, and K. E. Kezdy. 1990. Apolipoprotein A-I structure and lipid properties in homogeneous reconstituted spherical and discoidal high density lipoproteins. J. Biol. Chem. 265:22123-22129.
    • (1990) J. Biol. Chem. , vol.265 , pp. 22123-22129
    • Jonas, A.1    Wald, J.H.2    Toohill, K.L.H.3    Krul, E.S.4    Kezdy, K.E.5
  • 30
    • 0020475449 scopus 로고
    • A simple method for displaying the hydropathic character of a protein
    • Kyte, J., and R. F. Doolittle. 1982. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157:105-132.
    • (1982) J. Mol. Biol. , vol.157 , pp. 105-132
    • Kyte, J.1    Doolittle, R.F.2
  • 31
    • 0000243829 scopus 로고
    • PROCHECK: A program to check the stereochemical quality of protein structures
    • Laskowski, R. A., M. W. MacArthur, D. S. Moss, and J. M. Thornton. 1993. PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr. 26:283-291.
    • (1993) J. Appl. Crystallogr. , vol.26 , pp. 283-291
    • Laskowski, R.A.1    MacArthur, M.W.2    Moss, D.S.3    Thornton, J.M.4
  • 33
    • 0025868703 scopus 로고
    • The epitopes of apolipoprotein A-I define distinct structural domains including a mobile middle region
    • Marcel, Y. L., P. R. Prevost, H. Kao, E. Raffai, N. VuDac, J.-C. Fruchart, and E. Rassart. 1991. The epitopes of apolipoprotein A-I define distinct structural domains including a mobile middle region. J. Biol. Chem. 266:3644-3653.
    • (1991) J. Biol. Chem. , vol.266 , pp. 3644-3653
    • Marcel, Y.L.1    Prevost, P.R.2    Kao, H.3    Raffai, E.4    Vudac, N.5    Fruchart, J.-C.6    Rassart, E.7
  • 34
    • 0020490523 scopus 로고
    • Micellar complexes of human apolipoprotein A-I with phosphatidylcholines and cholesterol prepared from cholate-lipid dispersions
    • Matz, C. E., and A. Jonas. 1982. Micellar complexes of human apolipoprotein A-I with phosphatidylcholines and cholesterol prepared from cholate-lipid dispersions. J. Biol. Chem. 257:4535-4540.
    • (1982) J. Biol. Chem. , vol.257 , pp. 4535-4540
    • Matz, C.E.1    Jonas, A.2
  • 35
    • 0029936973 scopus 로고    scopus 로고
    • High yield overexpression and characterization of human recombinant proapolipoprotein A-I
    • McGuire, K. A., W. S. Davidson, and A. Jonas. 1996. High yield overexpression and characterization of human recombinant proapolipoprotein A-I. J. Lipid. Res. 37:1519-1528.
    • (1996) J. Lipid. Res. , vol.37 , pp. 1519-1528
    • McGuire, K.A.1    Davidson, W.S.2    Jonas, A.3
  • 36
    • 0028057108 scopus 로고
    • Raster3D version 2.0 - A program for photorealistic molecular graphics
    • Merritt, E. A., and M. E. P. Murphy. 1994. Raster3D version 2.0 - a program for photorealistic molecular graphics. Acta Crystallogr. D. 50:869-873.
    • (1994) Acta Crystallogr. D , vol.50 , pp. 869-873
    • Merritt, E.A.1    Murphy, M.E.P.2
  • 40
    • 0021329037 scopus 로고
    • Interaction of model discoidal complexes of phosphatidylcholine and apolipoprotein A-I plasma components
    • Nichols, A. V., E. L. Gong, P. J. Blanche, T. M. Forte, and V. G. Shore. 1984. Interaction of model discoidal complexes of phosphatidylcholine and apolipoprotein A-I plasma components. Biochim. Biophys. Acta. 793:325-337.
    • (1984) Biochim. Biophys. Acta , vol.793 , pp. 325-337
    • Nichols, A.V.1    Gong, E.L.2    Blanche, P.J.3    Forte, T.M.4    Shore, V.G.5
  • 41
    • 0013613456 scopus 로고
    • Human plasma apolipoproteins in biology and medicine
    • M. Rosseneu, editor. CRC Press, Boca Raton, FL
    • Pownall, H. J., and A. M. Gotto, Jr. 1992. Human plasma apolipoproteins in biology and medicine. In Structure and Function of Apolipoproteins. M. Rosseneu, editor. CRC Press, Boca Raton, FL. 1-32.
    • (1992) Structure and Function of Apolipoproteins , pp. 1-32
    • Pownall, H.J.1    Gotto Jr., A.M.2
  • 44
    • 0027384540 scopus 로고
    • Apolipoprotein A-I domains involved in lecithin-cholesterol acyltransferase activation
    • Sorci-Thomas, M., M. W. Kearns, and J. P. Lee. 1993. Apolipoprotein A-I domains involved in lecithin-cholesterol acyltransferase activation. J. Biol. Chem. 268:21403-21409.
    • (1993) J. Biol. Chem. , vol.268 , pp. 21403-21409
    • Sorci-Thomas, M.1    Kearns, M.W.2    Lee, J.P.3
  • 45
    • 0027431378 scopus 로고
    • Protein hydration elucidated by molecular dynamics simulation
    • Steinbach, P. J., and B. R. Brooks. 1993. Protein hydration elucidated by molecular dynamics simulation. Proc. Natl. Acad. Sci. USA. 90:9135-9139.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 9135-9139
    • Steinbach, P.J.1    Brooks, B.R.2
  • 46
    • 0025896727 scopus 로고
    • Water-protein interactions: Theory and experiment
    • Teeter, M. M. 1991. Water-protein interactions: theory and experiment. Annu. Rev. Biophys. Biophys. Chem. 20:577-600.
    • (1991) Annu. Rev. Biophys. Biophys. Chem. , vol.20 , pp. 577-600
    • Teeter, M.M.1
  • 47
    • 33646650705 scopus 로고
    • Reversible multiple time scale molecular dynamics
    • Tuckerman, M., B. J. Berne, and G. J. Martyna. 1992. Reversible multiple time scale molecular dynamics. J. Chem. Phys. 97:1990-2001.
    • (1992) J. Chem. Phys. , vol.97 , pp. 1990-2001
    • Tuckerman, M.1    Berne, B.J.2    Martyna, G.J.3
  • 49
    • 0025221262 scopus 로고
    • Investigation of the lipid domains and apolipoprotein orientation in reconstituted high density lipoproteins by fluorescence and IR methods
    • Wald, J. H., E. Goormaghtigh, J. D. Meutter, J.-M. Ruysschaert, and A. Jonas. 1990a. Investigation of the lipid domains and apolipoprotein orientation in reconstituted high density lipoproteins by fluorescence and IR methods. J. Biol. Chem. 265:20044-20050.
    • (1990) J. Biol. Chem. , vol.265 , pp. 20044-20050
    • Wald, J.H.1    Goormaghtigh, E.2    Meutter, J.D.3    Ruysschaert, J.-M.4    Jonas, A.5
  • 50
    • 0025202156 scopus 로고
    • Structure of apolipoprotein A-I in three homogeneous reconstituted high density lipoprotein particles
    • Wald, J. H., E. S. Krul, and A. Jonas. 1990b. Structure of apolipoprotein A-I in three homogeneous reconstituted high density lipoprotein particles. J. Biol. Chem. 265:20037-20043.
    • (1990) J. Biol. Chem. , vol.265 , pp. 20037-20043
    • Wald, J.H.1    Krul, E.S.2    Jonas, A.3
  • 51
    • 0001183716 scopus 로고
    • Simulation of macromolecules by multiple-time-step methods
    • Watanabe, M., and M. Karplus. 1995. Simulation of macromolecules by multiple-time-step methods. J. Phys. Chem. 99:5680-5697.
    • (1995) J. Phys. Chem. , vol.99 , pp. 5680-5697
    • Watanabe, M.1    Karplus, M.2
  • 52
    • 0025860481 scopus 로고
    • Three-dimensional structure of the LDL receptor-binding domain of human apolipoprotein E
    • Wilson, C., M. R. Wardell, K. H. Weisgraber, R. W. Mahley, and D. A. Agard. 1991. Three-dimensional structure of the LDL receptor-binding domain of human apolipoprotein E. Science. 252:1817-1822.
    • (1991) Science , vol.252 , pp. 1817-1822
    • Wilson, C.1    Wardell, M.R.2    Weisgraber, K.H.3    Mahley, R.W.4    Agard, D.A.5
  • 53
    • 0018792056 scopus 로고
    • High-density lipoprotein recombinants: Evidence for a bicycle tire micelle structure obtained by neutron scattering and electron microscopy
    • Wlodawer, A., J. P. Segrest, B. H. Chung, R. Chiovetti, Jr., and J. N. Weinstein. 1979. High-density lipoprotein recombinants: evidence for a bicycle tire micelle structure obtained by neutron scattering and electron microscopy. FEBS Lett. 104:231-235.
    • (1979) FEBS Lett. , vol.104 , pp. 231-235
    • Wlodawer, A.1    Segrest, J.P.2    Chung, B.H.3    Chiovetti Jr., R.4    Weinstein, J.N.5
  • 54
    • 0028845662 scopus 로고
    • Molecular dynamics study of the M412 intermediate of bacteriorhodopsin
    • Xu, D., M. Sheves, and K. Schulten. 1995. Molecular dynamics study of the M412 intermediate of bacteriorhodopsin. Biophys. J. 69:2745-2760.
    • (1995) Biophys. J. , vol.69 , pp. 2745-2760
    • Xu, D.1    Sheves, M.2    Schulten, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.