rpbA controls transcription of the constitutive phycocyanin gene set in Fremyella diplosiphon

Journal of Bacteriology

Volumn 179, Issue 24, 1997, Pages 7695-7704

  Kahn, Katherine ^a   Schaefer, Michael R ^a  

^a UNIVERSITY OF MISSOURI KANSAS CITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; DNA BINDING PROTEIN; HELIX LOOP HELIX PROTEIN; PHYCOCYANIN; PIGMENT; SULFUR;

ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIOPHAGE; BACTERIUM MUTANT; CONTROLLED STUDY; CYANOBACTERIUM; DNA HYBRIDIZATION; GENOME; MOLECULAR RECOGNITION; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; REPRESSOR GENE; TRANSCRIPTION REGULATION; TRANSPOSON;

BACTERIA (MICROORGANISMS); FREMYELLA DIPLOSIPHON;

EID: 0030782554     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.179.24.7695-7704.1997     Document Type: Article

References (39)

1. Aiba, H., S. Fujimoto, and N. Ozaki. 1982. Molecular cloning and nucleotide sequencing of the gene for E. coli cAMP receptor protein. Nucleic Acids Res. 10:1345-1361.
2. Allen, M. M. 1968. Simple conditions for growth of unicellular blue-green algae on plates. J. Phycol. 4:1-4.
3. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic loacal alignment search tool. J. Mol. Biol. 215:403-410.
4. Ausubel, F. M., R. Brent, R. E. Klingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl. 1989. Current protocols in molecular biology. John Wiley and Sons, New York, N.Y.
5. Bogorad, L. 1975. Phycobiliproteins and complementary chromatic adaptation. Annu. Rev. Plant Physiol. 26:369-401.
6. Bruns, B. U., W. R. Briggs, and A. R. Grossman. 1989. Molecular characterization of phycobilisome regulatory mutants of Fremyella diplosiphon. J. Bacteriol. 171:901-908.
7. Casey, E. S., D. M. Kehoe, and A. R. Grossman. 1997. Suppression of mutants aberrant in light intensity responses of complementary chromatic adaptation. J. Bacteriol. 179:4599-4606.
8. Chiang, G. G., M. R. Schaefer, and A. R. Grossman. 1992. Complementation of a red-light-indifferent cyanobacterial mutant. Proc. Natl. Acad. Sci. USA 89:9415-9419.
9. Chiang, G. G., M. R. Schaefer, and A. R. Grossman. 1992. Transformation of the filamentous cyanobacterium Fremyella diplosiphon by conjugation or electroporation. Plant Physiol. Biochem. 30:315-325.
10. Cobley, J. G., E. Zerweck, R. Reyes, A. Mody, J. R. Seludo-Unson, H. Jaeger, S. Weerasuriya, and S. Navankasattusas. 1993. Construction of shuttle plasmids which can be efficiently mobilized from Escherichia coli into the chromatically adapting cyanobacterium, Fremyella diplosiphon. Plasmid 30:90-105.
11. Conley, P. B., P. G. Lemaux, and A. R. Grossman. 1988. Molecular characterization and evolution of sequences encoding light-harvesting components in the chromatically adapting cyanobacterium Fremyella diplosiphon. J. Mol. Biol. 199:447-465.
12. Dhaese, P., J. Seurinck, B. De Smet, and M. Van Montagu. 1985. Nucleotide sequence and mutational analysis of an immunity repressor gene from Bacillus subtilis temperate phage φ105. Nucleic Acids Res. 13:5441-5455.
13. Dnerring, M., G. B. Schmidt and R. Huber. 1991. Isolation, crystallization, crystal structure analysis and refinement of constitutive C-phycocyanin from the chromatically adapting cyanobacterium Fremyella diplosiphon at 1.66 Å resolution. J. Mol. Biol. 217:577-592.
14. Farabaugh, P. J. 1978. Sequence of the lacI gene. Nature 274:765-769.
15. Grossman, A. R. 1990. Chromatic adaptation and the events involved in phycobilisome biosynthesis. Plant Cell Environ. 13:651-666.
16. Grossman, A. R., M. R. Schaefer, G. G. Chiang, and J. L. Collier. 1993. The phycobilisome: a light-harvesting complex responsive to environmental conditions. Microbiol. Rev. 57:725-749.
17. Harrison, S. C., and A. K. Aggarwal. 1990. DNA recognition by proteins with the helix-turn-helix motif. Annu. Rev. Biochem. 59:933-969.
18. Hsiang, M. W., R. D. Cole, Y. Takeda, and H. Echols. 1977. Amino acid sequence of Cro regulatory protein of bacteriophage lambda. Nature 270: 275-277.
19. Kahn, K., D. Mazel, J. Houmard, N. Tandeau de Marsac, and M. Schaefer. 1995. Tn5469 mutagenesis of chromatic adaptation genes in Calothrix sp. strain PCC 7601, p. 453-456. In P. Mathis (ed.), Photosynthesis: from light to biosphere, vol. III. Kluwer Academic Publishers, Dordrecht, The Netherlands.
20. Kahn, K., D. Mazel, J. Houmard, N. Tandeau de Marsac, and M. R. Schaefer. 1997. A role for cpeYZ in cyanobacterial phycoerythrin biosynthesis. J. Bacteriol. 179:998-1006.
21. Kahn, K., and M. R. Schaefer. 1995. Characterization of transposon Tn5469 from the cyanobacterium Fremyella diplosiphon. 3. Bacteriol. 177:7026-7032.
22. Kaneko, T., S. Sato, H. Kotani, A. Tanaka, E. Asamizu, Y, Nakamura, N. Miyajima, M. Hirosawa, M. Sugiura, S. Sasamoto, T. Kimura, T. Hosouchi, A. Matsuno, A. Muraki, N. Nakazaki, K. Naruo, S. Okumura, S. Shimpo, C. Takeuchi, T. Wada, A. Watanabe, M. Yamada, M. Yasuda, and S. Tabata. 1996. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC 6803. 11. Sequence determination of the entire genome and assignment of potential protein-coding regions. DNA Res. 3:109-136.
23. Kehoe, D. M., and A. R. Grossman. 1996. Similarity of a chromatic adaptation sensor to phytochrome and ethylene receptors. Science 273:1409-1412.
24. Kehoe, D. M., and A. R. Grossman. 1997. New classes of mutants in complementary chromatic adaptation provide evidence for a novel four-step phosphorelay system. J. Bacteriol. 179:3914-3921.
25. Kehoe, D. M., and A. R. Grossman. 1995. The use of site-directed mutagenesis in the analysis of complementary chromatic adaptation, p. 501-504. In P. Mathis (ed.), Photosynthesis: from light to biosphere, vol. III. Kluwer Academic Publishers, Dordrecht, The Netherlands.
26. Liu, Y., A. Chatterjee, and A. K. Chatterjee. 1994. Nucleotide sequence, organization and expression of rdgA and rdgB genes that regulate pectin lyase production in the plant pathogenic bacterium Erwinia carotovora subsp. carotovora in response to DNA-damaging agents. Mol. Microbiol. 14:999-1010.
27. Mazel, D., J. Houmard, and N. Tandeau de Marsac. 1988. A multigene family in Calothrix sp. PCC 7601 encodes phycocyanin, the major component of the cyanobacterial light-harvesting antenna. Mol. Gen. Genet. 211:296-304.
28. Mazel, D., and P. Marliere. 1989. Adaptive eradication of methionine and cysteine from cyanobacterial light-harvesting proteins. Nature 341:245-248.
29. Oelmuller, R., P. B. Conley, N. Federspiel, W. R. Briggs, and A. R. Grossman. 1988. Changes in accumulation and synthesis of transcripts encoding phycobilisome components during acclimation of Fremyella diplosiphon to different light qualities. Plant Physiol. 88:1077-1083.
30. Parkinson, J. S. 1995. Genetic approaches for signaling pathways and proteins, p. 9-23. In J. A. Hoch and T. J. Silhavy (ed.), Two-component signal transduction. ASM Press, Washington, D.C.
31. Reed, K. C., and D. A. Mann. 1985. Rapid transfer of DNA from agarose gels to nylon membranes. Nucleic Acids Res. 13:7207-7221.
32. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
33. Sanger, F., A. R. Coulson, G. F. Hong, D. F. Hill, and G. B. Petersen. 1982. Nucleotide sequence of bacteriophage lambda DNA. J. Mol. Biol. 162:729-773.
34. Schaefer, M. R., G. G. Chiang, and A. R. Grossman. 1993. RcaC, a novel bacterial regulator protein involved in complementary chromatic adaptation, p. 157-160. In N. Murata (ed.), Research in photosynthesis, vol. I. Kluwer Academic Publishers, Dordrecht, The Netherlands.
35. Schaefer, M. R., and S. S. Golden. 1989. Differential expression of members of a cyanobacterial psbA gene family in response to light. J. Bacteriol. 171:3973-3981.
36. Sidler, W. A. 1994. Phycobilisome and phycobiliprotein structure, p. 139-216. In D. A. Bryant (ed.), The molecular biology of cyanobacteria. Kluwer Academic Publishers, Dordrecht, The Netherlands.
37. Tandeau de Marsac, N. 1983. Phycobilisomes and complementary chromatic. adaptation in cyanobacteria. Bull. Inst. Pasteur 81:201-254.
38. Tandeau de Marsac, N., and J. Houmard. 1988. Complementary chromatic adaptation: physiological conditions and action spectra. Methods Enzymol. 167:318-328.
39. Van Kaer, L., Y. Gansemans, M. Van Montagu, and P. Dhaese. 1988. Interaction of the Bacillus subtilis phage φ105 repressor with operator DNA: a genetic analysis. EMBO J. 7:859-866.