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Volumn 16, Issue 21, 1997, Pages 6603-6612

Plus strand strong-stop DNA transfer in yeast Ty retrotransposons

Author keywords

Evolution; Primer binding site; Retrotransposon; Reverse transcriptase; tRNA; Yeast

Indexed keywords

FUNGAL DNA; PRIMER DNA;

EID: 0030776187     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/16.21.6603     Document Type: Article
Times cited : (29)

References (48)
  • 1
    • 0027287820 scopus 로고
    • Retrovirus mediated insertion of expressed and non-expressed genes at identical chromosomal locations
    • Berwin, B. and Barklis, E. (1993) Retrovirus mediated insertion of expressed and non-expressed genes at identical chromosomal locations. Nucleic Acids Res., 21, 2399-2407.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2399-2407
    • Berwin, B.1    Barklis, E.2
  • 2
    • 0024671109 scopus 로고
    • Specificity of mismatch repair following transformation of Saccharomyces cerevisiae with heteroduplex plasmid DNA
    • Bishop, D.K., Andersen, J. and Kolodner, R.D. (1989) Specificity of mismatch repair following transformation of Saccharomyces cerevisiae with heteroduplex plasmid DNA. Proc. Natl Acad. Sci. USA, 86, 3713-3717.
    • (1989) Proc. Natl Acad. Sci. USA , vol.86 , pp. 3713-3717
    • Bishop, D.K.1    Andersen, J.2    Kolodner, R.D.3
  • 3
    • 0029055878 scopus 로고
    • Effects on DNA synthesis and translocation caused by mutations in the RNase H domain of Moloney murine leukemia virus reverse transcriptase
    • Blain, S.W. and Goff, S.P. (1995) Effects on DNA synthesis and translocation caused by mutations in the RNase H domain of Moloney murine leukemia virus reverse transcriptase. J. Virol., 69, 4440-4452.
    • (1995) J. Virol. , vol.69 , pp. 4440-4452
    • Blain, S.W.1    Goff, S.P.2
  • 4
    • 0021668558 scopus 로고
    • A positive selection for mutants lacking orotidine 5′-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance
    • Bocke, J.D., Lacroute, F. and Fink, G.R. (1984) A positive selection for mutants lacking orotidine 5′-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance. Mol. Gen. Genet., 197, 345-346.
    • (1984) Mol. Gen. Genet. , vol.197 , pp. 345-346
    • Bocke, J.D.1    Lacroute, F.2    Fink, G.R.3
  • 5
    • 0021799352 scopus 로고
    • Ty elements transpose through an RNA intermediate
    • Boeke, J.D., Garfinkel, D.J., Styles, C.A. and Fink, G.R. (1985) Ty elements transpose through an RNA intermediate. Cell, 40, 491-500.
    • (1985) Cell , vol.40 , pp. 491-500
    • Boeke, J.D.1    Garfinkel, D.J.2    Styles, C.A.3    Fink, G.R.4
  • 6
    • 0022815986 scopus 로고
    • Saccharomyces cerevisiae SPT3 gene is required for transposition and transpositional recombination of chromosomal Ty elements
    • Boeke, J.D., Styles, C.A. and Fink, G.R (1986) Saccharomyces cerevisiae SPT3 gene is required for transposition and transpositional recombination of chromosomal Ty elements. Mol. Cell. Biol., 6, 3575-3581.
    • (1986) Mol. Cell. Biol. , vol.6 , pp. 3575-3581
    • Boeke, J.D.1    Styles, C.A.2    Fink, G.R.3
  • 7
    • 0023990722 scopus 로고
    • The Saccharomyces cerevisiae genome contains functional and nonfunctional copies of transposon Ty1
    • Boeke, J.D., Eichinger, D.J., Castrillon, D. and Fink, G.R. (1988a) The Saccharomyces cerevisiae genome contains functional and nonfunctional copies of transposon Ty1. Mol. Cell. Biol., 8, 1432-1442.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 1432-1442
    • Boeke, J.D.1    Eichinger, D.J.2    Castrillon, D.3    Fink, G.R.4
  • 8
    • 0024286690 scopus 로고
    • A general method for the chromosomal amplification of genes in yeast
    • Boeke, J.D., Xu, H. and Fink, G.R. (1988b) A general method for the chromosomal amplification of genes in yeast. Science, 239, 280-282.
    • (1988) Science , vol.239 , pp. 280-282
    • Boeke, J.D.1    Xu, H.2    Fink, G.R.3
  • 9
    • 0025641827 scopus 로고
    • Transfer RNA genes are genomic targets for de novo transposition of Ty3
    • Chalker, D.L. and Sandmeyer, S.B. (1990) Transfer RNA genes are genomic targets for de novo transposition of Ty3. Genetics, 126, 837-850.
    • (1990) Genetics , vol.126 , pp. 837-850
    • Chalker, D.L.1    Sandmeyer, S.B.2
  • 10
    • 0026579205 scopus 로고
    • Initiator methionine tRNA is essential for Ty1 transposition in yeast
    • Chapman, K.B., Byström, A.S. and Boeke, J.D. (1992) Initiator methionine tRNA is essential for Ty1 transposition in yeast. Proc. Natl Acad. Sci. USA, 89, 3236-3240.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 3236-3240
    • Chapman, K.B.1    Byström, A.S.2    Boeke, J.D.3
  • 11
    • 0026506252 scopus 로고
    • A second origin of DNA plus-strand synthesis is required for optimal human immunodeficiency virus replication
    • Charneau, P., Alizon, M. and Clavel, F. (1992) A second origin of DNA plus-strand synthesis is required for optimal human immunodeficiency virus replication. J. Virol., 66, 2814-2820.
    • (1992) J. Virol. , vol.66 , pp. 2814-2820
    • Charneau, P.1    Alizon, M.2    Clavel, F.3
  • 12
    • 0028222894 scopus 로고
    • Heterogeneous functional Ty1 elements are abundant in the Saccharomyces cerevisiae genome
    • Curcio, M.J. and Garfinkel, D.J. (1994) Heterogeneous functional Ty1 elements are abundant in the Saccharomyces cerevisiae genome. Genetics, 136, 1245-1259.
    • (1994) Genetics , vol.136 , pp. 1245-1259
    • Curcio, M.J.1    Garfinkel, D.J.2
  • 13
    • 0021244732 scopus 로고
    • RNA-primed initiation of Moloney murine leukemia virus plus strands by reverse transcriptase in vitro
    • Finston, W.I. and Champoux, J.J. (1984) RNA-primed initiation of Moloney murine leukemia virus plus strands by reverse transcriptase in vitro. J. Virol., 51, 26-33.
    • (1984) J. Virol. , vol.51 , pp. 26-33
    • Finston, W.I.1    Champoux, J.J.2
  • 14
    • 0029981558 scopus 로고    scopus 로고
    • Extended interactions between the primer tRNA(Met) and genomic RNA of the yeast Ty1 retrotransposon
    • Friant, S., Heyman, T., Wilhelm, M.L. and Wilhelm, F.X. (1996) Extended interactions between the primer tRNA(Met) and genomic RNA of the yeast Ty1 retrotransposon. Nucleic Acids Res., 24, 441-449.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 441-449
    • Friant, S.1    Heyman, T.2    Wilhelm, M.L.3    Wilhelm, F.X.4
  • 15
    • 0030970398 scopus 로고    scopus 로고
    • Sequence comparison of the Ty1 and Ty2 elements of the yeast genome supports the structural model of the tRNAMet-Ty1 RNA reverse transcription initiation complex
    • Friant, S., Heyman, T., Poch, O., Wilhelm, M. and Wilhelm, F.X. (1997) Sequence comparison of the Ty1 and Ty2 elements of the yeast genome supports the structural model of the tRNAMet-Ty1 RNA reverse transcription initiation complex. Yeast, 13, 639-645.
    • (1997) Yeast , vol.13 , pp. 639-645
    • Friant, S.1    Heyman, T.2    Poch, O.3    Wilhelm, M.4    Wilhelm, F.X.5
  • 16
    • 0029819321 scopus 로고    scopus 로고
    • Replication infidelity during a single cycle of Ty1 retrotransposition
    • Gabriel, A., Willems, M., Mules, E.H. and Bocke, J.D. (1996) Replication infidelity during a single cycle of Ty1 retrotransposition. Proc. Natl Acad. Sci. USA, 93, 7767-7771.
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 7767-7771
    • Gabriel, A.1    Willems, M.2    Mules, E.H.3    Bocke, J.D.4
  • 17
    • 0022129513 scopus 로고
    • Ty element transposition: Reverse transcriptase and virus-like particles
    • Garfinkel, D.J., Boeke, J.D. and Fink, G.R. (1985) Ty element transposition: reverse transcriptase and virus-like particles. Cell. 42, 507-517.
    • (1985) Cell , vol.42 , pp. 507-517
    • Garfinkel, D.J.1    Boeke, J.D.2    Fink, G.R.3
  • 18
    • 0025353401 scopus 로고
    • Characterisation of a transpositionally active Ty3 element and identification of the Ty3 integrase protein
    • Hansen, L.J. and Sandmeyer, S.B. (1990) Characterisation of a transpositionally active Ty3 element and identification of the Ty3 integrase protein. J. Virol., 64, 2599-2607.
    • (1990) J. Virol. , vol.64 , pp. 2599-2607
    • Hansen, L.J.1    Sandmeyer, S.B.2
  • 19
    • 0028788248 scopus 로고
    • Plus-strand DNA synthesis of the yeast retrotransposon Ty1 is initiated at two sites. PPT1 next to the 3′ LTR and PPT2 within the pol gene
    • Heyman, T., Agoutin, B., Friant, S., Wilhelm, F.X. and Wilhelm, M.L. (1995) Plus-strand DNA synthesis of the yeast retrotransposon Ty1 is initiated at two sites. PPT1 next to the 3′ LTR and PPT2 within the pol gene. J. Mol. Biol., 253, 291-303.
    • (1995) J. Mol. Biol. , vol.253 , pp. 291-303
    • Heyman, T.1    Agoutin, B.2    Friant, S.3    Wilhelm, F.X.4    Wilhelm, M.L.5
  • 20
    • 0025635705 scopus 로고
    • Retroviral recombination and reverse transcription
    • Hu, W.-S. and Temin, H.M. (1990) Retroviral recombination and reverse transcription. Science, 250, 1227-1233.
    • (1990) Science , vol.250 , pp. 1227-1233
    • Hu, W.-S.1    Temin, H.M.2
  • 21
    • 0025314263 scopus 로고
    • Processing of the primer for plus strand DNA synthesis by human immunodeficiency virus 1 reverse transcriptase
    • Huber, H.E. and Richardson, C.C. (1990) Processing of the primer for plus strand DNA synthesis by human immunodeficiency virus 1 reverse transcriptase. J. Biol. Chem., 265, 10565-10573.
    • (1990) J. Biol. Chem. , vol.265 , pp. 10565-10573
    • Huber, H.E.1    Richardson, C.C.2
  • 23
    • 0028817477 scopus 로고
    • Ty3 transposes in mating populations of yeast: A novel transposition assay for Ty3
    • Kinsey, P.T. and Sandmeyer, S.B. (1995) Ty3 transposes in mating populations of yeast: a novel transposition assay for Ty3. Genetics, 139, 81-94.
    • (1995) Genetics , vol.139 , pp. 81-94
    • Kinsey, P.T.1    Sandmeyer, S.B.2
  • 24
    • 0031039590 scopus 로고    scopus 로고
    • Determination of the site of first strand transfer during Moloney murine leukemia virus reverse transcription and identification of strand transfer-associated reverse transcriptase errors
    • Kulpa, D., Topping, R. and Telesnitsky, A. (1997) Determination of the site of first strand transfer during Moloney murine leukemia virus reverse transcription and identification of strand transfer-associated reverse transcriptase errors. EMBO J., 16, 856-865.
    • (1997) EMBO J. , vol.16 , pp. 856-865
    • Kulpa, D.1    Topping, R.2    Telesnitsky, A.3
  • 25
    • 0028027547 scopus 로고
    • The primer tRNA sequence is not inherited during Ty1 retrotransposition
    • Lauermann, V. and Boeke, J.D. (1994) The primer tRNA sequence is not inherited during Ty1 retrotransposition. Proc. Natl. Acad. Sci. USA. 91, 9847-9851.
    • (1994) Proc. Natl. Acad. Sci. USA. , vol.91 , pp. 9847-9851
    • Lauermann, V.1    Boeke, J.D.2
  • 26
    • 0028800299 scopus 로고
    • Plus-strand strong-stop DNA in retrotransposon Ty1
    • Lauermann, V., Nam, K., Trambley, J. and Boeke, J.D. (1995) Plus-strand strong-stop DNA in retrotransposon Ty1. J. Virol., 69, 7845-7850.
    • (1995) J. Virol. , vol.69 , pp. 7845-7850
    • Lauermann, V.1    Nam, K.2    Trambley, J.3    Boeke, J.D.4
  • 27
    • 0030965553 scopus 로고    scopus 로고
    • Increased length of Long Terminal Repeats inhibits Ty1 transposition and leads to the formation of tandem multimers
    • Lauermann, V., Hermankova, M. and Bocke, J.D. (1997) Increased length of Long Terminal Repeats inhibits Ty1 transposition and leads to the formation of tandem multimers. Genetics, 145, 911-922.
    • (1997) Genetics , vol.145 , pp. 911-922
    • Lauermann, V.1    Hermankova, M.2    Bocke, J.D.3
  • 29
    • 0029023845 scopus 로고
    • Substrate specificity of Ty1 integrase
    • Moore, S.P., Powers, M. and Garfinkel, D.J. (1995) Substrate specificity of Ty1 integrase. J. Virol., 69, 4683-4692.
    • (1995) J. Virol. , vol.69 , pp. 4683-4692
    • Moore, S.P.1    Powers, M.2    Garfinkel, D.J.3
  • 30
    • 0020198395 scopus 로고
    • Trp primer molecule from viral DNA by ribonuclease H during reverse transcription
    • Trp primer molecule from viral DNA by ribonuclease H during reverse transcription. Cell, 30, 797-805.
    • (1982) Cell , vol.30 , pp. 797-805
    • Omer, C.A.1    Faras, A.J.2
  • 31
    • 0024297783 scopus 로고
    • Ordered interstrand and intrastrand DNA transfer during reverse transcription
    • Panganiban, A.T. and Fiore, D. (1988) Ordered interstrand and intrastrand DNA transfer during reverse transcription. Science, 241, 1064-1069.
    • (1988) Science , vol.241 , pp. 1064-1069
    • Panganiban, A.T.1    Fiore, D.2
  • 32
    • 0021213885 scopus 로고
    • Temperature effects on the rate of Ty transposition
    • Paquin, C.F., and Williamson, V.M. (1984) Temperature effects on the rate of Ty transposition. Science, 226, 53-55.
    • (1984) Science , vol.226 , pp. 53-55
    • Paquin, C.F.1    Williamson, V.M.2
  • 33
    • 0027317654 scopus 로고
    • Biochemical and electron microscope analyses of the DNA reverse transcripts present in the virus-like particles of the yeast transposon Ty1. Identification of a second origin of Ty1 DNA plus strand synthesis
    • Pochart, P., Agoutin, B., Rousette, S., Chanet, R., Doroszkiewicz, V. and Heyman, T. (1993) Biochemical and electron microscope analyses of the DNA reverse transcripts present in the virus-like particles of the yeast transposon Ty1. Identification of a second origin of Ty1 DNA plus strand synthesis. Nucleic Acids Res., 21, 3513-3520.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 3513-3520
    • Pochart, P.1    Agoutin, B.2    Rousette, S.3    Chanet, R.4    Doroszkiewicz, V.5    Heyman, T.6
  • 34
    • 0023265113 scopus 로고
    • The role of Moloney murine leukemia virus RNase H activity in the formation of plus-strand primers
    • Rattray, A.J. and Champoux, J.J. (1987) The role of Moloney murine leukemia virus RNase H activity in the formation of plus-strand primers J. Virol., 61, 2843-2851.
    • (1987) J. Virol. , vol.61 , pp. 2843-2851
    • Rattray, A.J.1    Champoux, J.J.2
  • 35
    • 0024417604 scopus 로고
    • Plus-strand priming by Moloney murine leukemia virus: The sequence features important for cleavage by RNase H
    • Rattray, A.J. and Champoux, J.J. (1989) Plus-strand priming by Moloney murine leukemia virus: the sequence features important for cleavage by RNase H. J. Mol. Biol., 209, 445-456.
    • (1989) J. Mol. Biol. , vol.209 , pp. 445-456
    • Rattray, A.J.1    Champoux, J.J.2
  • 37
    • 0019957902 scopus 로고
    • Reversion of a promoter deletion in yeast
    • Scherer, S., Mann, C. and Davis, R.W. (1982) Reversion of a promoter deletion in yeast. Nature, 298, 815-819.
    • (1982) Nature , vol.298 , pp. 815-819
    • Scherer, S.1    Mann, C.2    Davis, R.W.3
  • 38
    • 0027939848 scopus 로고
    • Efficient homologous recombination of Ty1 element cDNA when integration is blocked
    • Sharon, G., Burkett, T.J. and Garfinkel, D.J. (1994) Efficient homologous recombination of Ty1 element cDNA when integration is blocked. Mol. Cell. Biol., 14, 6540-6551.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 6540-6551
    • Sharon, G.1    Burkett, T.J.2    Garfinkel, D.J.3
  • 39
    • 0031575825 scopus 로고    scopus 로고
    • RNase H cleavage of tRNAPro mediated by M-MuLV and HIV-1 reverse transcriptases
    • Smith, C.M., Potts, W.B., Smith, J.S. and Roth, M.J. (1997) RNase H cleavage of tRNAPro mediated by M-MuLV and HIV-1 reverse transcriptases. Virology, 229, 437-46.
    • (1997) Virology , vol.229 , pp. 437-446
    • Smith, C.M.1    Potts, W.B.2    Smith, J.S.3    Roth, M.J.4
  • 40
    • 0022422342 scopus 로고
    • Nucleotide sequence transcriptional mapping of the yeast pet56-his3-ded1 gene region
    • Struhl, K. (1985) Nucleotide sequence and transcriptional mapping of the yeast pet56-his3-ded1 gene region. Nucleic Acids Res., 13, 8587-8601.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 8587-8601
    • Struhl, K.1
  • 41
    • 0002333979 scopus 로고
    • Strong-stop strand transfer during reverse transcription
    • Skalka, A.M. and Goff, S.R (eds). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Telesnitsky, A. and Goff, S.P. (1993) Strong-stop strand transfer during reverse transcription. In Skalka, A.M. and Goff, S.R (eds). Strong-Stop Strand Transfer During Reverse Transcription. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 49-83.
    • (1993) Strong-Stop Strand Transfer during Reverse Transcription , pp. 49-83
    • Telesnitsky, A.1    Goff, S.P.2
  • 42
    • 0027180278 scopus 로고
    • Retrovirus variation and reverse transcription: Abnormal strand transfers result in retrovirus genetic variation
    • Temin, H. (1993) Retrovirus variation and reverse transcription: abnormal strand transfers result in retrovirus genetic variation. Proc. Natl Acad. Sci. USA, 90, 6900-6903.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 6900-6903
    • Temin, H.1
  • 43
    • 0029135164 scopus 로고
    • Human immunodeficiency virus type 1 can use different tRNAs as primers for reverse transcription but selectively maintains a primer binding site complementary to tRNA(3Lys)
    • Wakefield, J.K., Wolf, A.G. and Morrow, C.D. (1995) Human immunodeficiency virus type 1 can use different tRNAs as primers for reverse transcription but selectively maintains a primer binding site complementary to tRNA(3Lys). J. Virol., 69, 6021-6029.
    • (1995) J. Virol. , vol.69 , pp. 6021-6029
    • Wakefield, J.K.1    Wolf, A.G.2    Morrow, C.D.3
  • 44
    • 0030051203 scopus 로고    scopus 로고
    • Construction of a type 1 human immunodeficiency virus that maintains a primer binding site complementary to tRNA(His)
    • Wakefield, J.K., Kang, S.M. and Morrow, C.D. (1996) Construction of a type 1 human immunodeficiency virus that maintains a primer binding site complementary to tRNA(His). J. Virol., 70, 966-975.
    • (1996) J. Virol. , vol.70 , pp. 966-975
    • Wakefield, J.K.1    Kang, S.M.2    Morrow, C.D.3
  • 45
    • 0025185912 scopus 로고
    • Sequence of the circle junction of human immunodeficiency virus type 1: Implications for reverse transcription and integration
    • Whitcomb, J.M., Kumar, R. and Hughes, S.H. (1990) Sequence of the circle junction of human immunodeficiency virus type 1: implications for reverse transcription and integration. J. Virol., 64, 4903-4906.
    • (1990) J. Virol. , vol.64 , pp. 4903-4906
    • Whitcomb, J.M.1    Kumar, R.2    Hughes, S.H.3
  • 46
    • 0030741592 scopus 로고
    • Heterogeneous terminal structure of Ty1 and Ty3 reverse transcripts
    • Wilhelm, M., Heyman, T., Friant, S. and Wilhelm, F.X. (1947) Heterogeneous terminal structure of Ty1 and Ty3 reverse transcripts. Nucleic Acids Res., 25, 2161-2166.
    • (1947) Nucleic Acids Res. , vol.25 , pp. 2161-2166
    • Wilhelm, M.1    Heyman, T.2    Friant, S.3    Wilhelm, F.X.4
  • 47
    • 0025006614 scopus 로고
    • Origin and evolution of retroelements based on their reverse transcriptase sequences
    • Xiong, Y. and Eickbush, T.H. (1990) Origin and evolution of retroelements based on their reverse transcriptase sequences. EMBO J., 9, 3353-3302.
    • (1990) EMBO J. , vol.9 , pp. 3353-13302
    • Xiong, Y.1    Eickbush, T.H.2
  • 48
    • 0023461920 scopus 로고
    • High frequency deletion between homologous sequences during retrotransposition of Ty elements in Saccharomyces cerevisiae
    • Xu, H. and Boeke, J.D. (1987) High frequency deletion between homologous sequences during retrotransposition of Ty elements in Saccharomyces cerevisiae. Proc. Natl Acad. Sci. USA, 84, 8553-8557.
    • (1987) Proc. Natl Acad. Sci. USA , vol.84 , pp. 8553-8557
    • Xu, H.1    Boeke, J.D.2


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