Assessment of a species-specific element (Brep 1) in banana

Theoretical and Applied Genetics

Volumn 95, Issue 5-6, 1997, Pages 922-931

  Baurens, F C ^a   Noyer, J L ^a   Lanaud, C ^a   Lagoda, P J L ^a  

^a CIRAD   (France)

Author keywords

Banana; Genetic relationships; Musa; Repetitive DNA; Species specific sequences

Indexed keywords

EID: 0030775735     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220050643     Document Type: Article

References (31)

1. Aledo R, Raz R, Montfor A, Vicient CM, Puigdomenech P, Martinez-Izquierdo JA (1995) Chromosome localization and characterization of a family of long interspersed repetitive DNA elements from the genus Zea. Theor Appl Genet 90 : 1094-1100
2. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic Local Alignment Search Tool. J Mol Biol 215 : 403-410
3. Baurens F-C, Noyer JL, Lanaud C, Lagoda PJL (1996) Use of competitive PCR to assay copy number of repetitive elements in banana. Mol Gen Genet 253 : 57-64
4. Bhat KV, Jarret RL (1995) Random amplified polymorphic DNA and genetic diversity in Indian Musa germplasm. Genet Resource Crop Evol 42 : 107-118
5. Cai Q, Bullen MR (1994) Analysis of genome-specific sequences in Phleum species: identification and use for study of genomic relationships. Theor Appl Genet 88 : 831-837
6. Carreel F (1994) Etude de la diversite génétique (genre Musa) à l'aide des RFLP. PhD thesis, Institut National Agronomique Paris-Grignon, France
7. Cheesman EE (1947) Classification of the bananas. Kew Bull 2 : 97-117
8. Dessauw D (1987) Etude de la stérilité du bananier (Musa ssp.) et des relations cytotaxonomiques entre M. acuminata et M. balbisiana Colla. PhD thesis, Paris XI University, France
9. Dolezel J, Dolezlovà M, Novàk FJ (1994) Flow cytometric estimation of nuclear DNA amount in diploid bananas (Musa acuminata and M. balhisiana). Biol Plant 36 : 351-357
10. Fauré S, Noyer JL, Horry JP, Bakry F, Lanaud C, Gonzalez de León D (1993a) A molecular marker-based linkage map of diploid bananas (Musa acuminata). Theor Appl Genet 87 : 517-526
11. Fauré S, Noyer JL, Carreel F, Horry JP, Bakry F, Lanaud C (1993b) Maternal inheritance of chloroplast genome and paternal inheritance of mitochondrial genome in bananas (Musa acuminata). Curr Genet 25 : 265-269
12. Felsenstein J (1993) PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle, Wash.
13. Gawel NJ, Jarret RL (1991) A modified CTAB DNA extraction procedure for Musa and Ipomoea Plant Mol Biol Rep 9 : 262-266
14. Jarret RL, Vuylsteke DR, Gawel NJ, Pimentel RB, Dunbar LJ (1993) Detecting genetic diversity in diploid bananas using PCR and primers from a highly repetitive DNA sequence. Euphytica 68 : 69-76
15. Jeffreys AJ, MacLeod A, Tamaki K, Neil DL, Monckton DG (1991) Minisatellite repeat coding as a digital approach to DNA typing. Nature 354 : 204-209
16. Kaemmer D, Afza R, Weising K, Kahl G, Novak FJ (1992) Oligonucleotide and amplification fingerprinting of wild species and cultivars of banana (Musa spp). Bio/Technology 10 : 1030-1035
17. Kimura M (1980) A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16 : 111-120
18. King K, Jobst J, Hemleben V (1995) Differential homogenization and amplification of two satellite DNAs in the genus Cucurbita (Cucurbitaceae). J Mol Evol 41 : 996-1005
19. Kolchinsky A, Gresshoff PM (1995) A major satellite DNA of soybean is a 92-base pairs tandem repeat. Theor Appl Genet 90 : 621-626
20. Lebot V, Aradhya KM, Manshardt R, Meilleur B (1993) Genetic relationships among cultivated bananas and plantains from Asia and the Pacific. Euphytica 67 : 163-175
21. Li X-B, Liang C-Z, Wu H-G, Zhai W-X, Huang N, Zhu L-H (1996) Isolation and identification of a non-specific tandemly repeated DNA sequence in Orvza species. Theor Appl Genet 92 : 702-708
22. Mizrokhi LJ, Mazo AM (1991) Cloning and analysis of the mobile element gypsy from D. viridis. Nucleic Acids Res 19 : 913-916
23. Pearson WR, Lipman DJ (1988) Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85 : 2444-2448
24. Radman M, Wagner R (1993) Mismatch recognition in chromosomal interactions and speciation. Chromosoma 102 : 369-373
25. Reddy AS, Kiefer-Meyer MC, and Delseny M (1993) Characterization of new variants of a satellite DNA from Oryza officinalis, specific for the CC genome of wild rice. Genome 36 : 750-761
26. Schmidt T, Helsop-Harrison JS (1993) Variability and evolution of highly repeated DNA sequences in the genus Beta. Genome 36 : 1074-1079
27. Simmonds NW, Shepherd K (1955) The taxonomy and origins of the cultivated bananas. Linnean Soc London 55 : 302-312
28. Simmonds NW (1962) The evolution of bananas. Longman Group UK Limited, London, pp 268
29. Swofford DL (1993) PAUP 3.1 (Phylogenetic Analysis Using Parsimony), Laboratory of molecular systematics, Smithsonian Institution, Washington, D.C.
30. Voytas DF, Cummings MP, Konieczny A, Ausubel FM, Rodermel SR (1992) Copia-like retrotransposons are ubiquitous among plants. Proc Natl Acad Sci USA 89 : 7124-7128
31. White SE, Habera LF, Wessler SR (1994) Retrotransposons in the flanking regions of normal plants genes: a role of copia-like elements in the evolution of gene structure and expression. Proc Natl Acad Sci USA 91 : 11792-11796