The complete nucleotide sequence of prune dwarf ilarvirus RNA-1

Archives of Virology

Volumn 142, Issue 9, 1997, Pages 1911-1918

  Rampitsch, C ^a   Eastwell, K C ^a  

^a AGRICULTURE AND AGRI FOOD CANADA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 1 PROTEIN, PRUNE DWARF VIRUS; RNA-1 PROTEIN, PRUNE DWARF VIRUS; VIRUS PROTEIN; VIRUS RNA;

ALFALFA MOSAIC VIRUS; AMINO ACID SEQUENCE; ARTICLE; BROMOVIRUS; CHEMISTRY; CLASSIFICATION; CONFORMATION; GENETICS; ILARVIRUS; MOLECULAR CLONING; MOLECULAR GENETICS; MOLECULAR WEIGHT; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY;

ALFALFA MOSAIC VIRUS; AMINO ACID SEQUENCE; BASE SEQUENCE; BROMOVIRIDAE; CLONING, MOLECULAR; ILARVIRUS; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; NUCLEIC ACID CONFORMATION; OPEN READING FRAMES; PHYLOGENY; RNA, VIRAL; VIRAL PROTEINS;

ALFALFA MOSAIC VIRUS; ALFAMOVIRUS; BROMOVIRUS; CITRUS; CITRUS LEAF RUGOSE VIRUS; ILARVIRUS; MALUS X DOMESTICA; MEDICAGO SATIVA; SPINACIA OLERACEA;

EID: 0030773026     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007050050210     Document Type: Article

References (24)

1. Bachman EJ, Scott SW, Xin G, Vance VB (1994) The complete nucleotide sequence of prune dwarf ilarvirus RNA 3: implications for coat protein activation of genome replication in ilarviruses. Virology 201: 127-131
2. Cabot EL, Beckenbach AT (1989) Simultaneous editing of multiple nucleic acid and protein sequences with ESEE. Cabios 5: 233-234
3. Coffin RS, Coutts RHA (1992) DsRNA cloning and diagnosis of beet pseudo-yellows virus by PCR and nucleic acid hybridization. Intervirology 23: 197-203
4. Cornelissen BJC, Brederode FT, Moorman RJM, Bol JF (1983) Complete nucleotide sequence of alfalfa mosaic virus RNA1. Nucleic Acids Res 11: 1 253-1 265
5. Cornelissen BJC, Brederode FT, Veeneman GH, Van Boom JH, Bol JF (1983) Complete nucleotide sequence of alfalfa mosaic virus RNA 2. Nucleic Acids Res 11: 3019-3025
6. Devereux J, Haeberli P, Smithies O (1984) A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12: 387-395
7. Felsenstein J (1989) PHYLIP - phylogeny inference package (version 3.4). Cladistics 5: 164-166
8. Ge X, Scott SW (1994) The nucleotide sequence of citrus leaf rugose ilarvirus RNA-2. J Gen Virol 75: 2 841-2 846
9. Grieco F, Martelli GP, Savino V (1995) The nucleotide sequence of RNA3 and RNA4 of olive latent virus 2. J Gen Virol 76: 929-937
10. Guo D, Maiss E, Adam G, Casper R (1995) Prunus necrotic ringspot ilarvirus: nucleotide sequence of RNA3 and the relationship to other ilarviruses based on coat protein comparison. J Gen Virol 76: 1 073-1 079
11. Hirzmann J, Luo D, Hahnen J, Hobom G (1993) Determination of messenger RNA 5′ ends by reverse transcription of the cap structure. Anal Biochem 21: 3 597-3 598
12. Houser-Scott F, Baer ML, Liem KF, Cai J-M, Gehrke L (1994) Nucleotide sequence and structural determinants of specific binding of coat protein peptides to the 3′ untranslated region of alfalfa mosaic virus RNA 4. J Virol 68: 2 194-2 205
13. Kamer G, Argos P (1984) Primary structural comparison of RNA dependent RNA polymerases from plant animal and bacterial viruses. Nucleic Acids Res 12: 7 269-7 282
14. Kimmel AL, Berger SL (1987) Preparation of cDNA and the generation of cDNA libraries: the overview. Methods Enzymol 152: 307-316
15. Koper-Zwarthoff EC, Bol JF (1980) Nucleotide sequence of the putative recognition site for coat protein in the RNAs of alfalfa mosaic virus and tobacco streak virus. Nucleic Acids Res 8: 3 307-3 318
16. Martelli GP (1992) Classification and nomenclature of viruses: state of the art. Plant Dis 76: 436-442
17. Morris TJ, Dodds JA (1979) Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue. Phytopathology 69: 854-858
18. Poch O, Sauvaget I, Delarue M, Tordo N (1989) Identification of four conserved motifs among the RNA-dependent RNA polymerases. EMBO J 8: 3 867-3 874
19. Rampitsch C, Eastwell KC, Hall J (1995) Setting confidence limits for the detection of prune dwarf virus in Prunus avium with a monoclonal antibody-based triple antibody sandwich ELISA. Ann Appl Biol 126: 485-491
20. Reusken CB, Neeleman L, Bol JF (1994) The 3′ untranslated region of alfalfa mosaic virus RNA3 contains two independent binding sites for viral coat protein. Nucleic Acids Res 22: 1 346-1 353
21. Reusken CB, Neeleman L, Bol JF (1995) Ability of tobacco streak virus coat protein to substitute for late functions of alfalfa mosaic virus coat protein. J Virol 69: 4 552-4 555
22. Rybicki EP (1995) Bromoviridae. In: Murphy FA, Fauquet CM, Bishop DHL, Ghabrial SA, Jarvis AW, Martelli GP, Mayo MA, Summers MD (eds) Virus Taxonomy. Classification and Nomenclature of Viruses. Sixth Report of the International Committee on Taxonomy of Viruses. Springer, Wien, New York, pp 450-457 (Arch Virol [Suppl] 10)
23. Scott SW, Ge X (1995) The nucleotide sequence of citrus leaf rugose virus RNA1. J Gen Virol 76: 3 233-3 238
24. Ziegler A, Natsuaki T, Mayo MA, Jolly CA, Murant AF (1992) The nucleotide sequence of RNA-1 of raspberry bushy dwarf virus. J Gen Virol 73: 3 213-3 218