A radiation hybrid map of human chromosome 5 with integration of cytogenetic, genetic, and transcripts maps

Genome Research

Volumn 7, Issue 9, 1997, Pages 897-909

  McPherson, John D ^a,b   Apostol, Barbara ^a   Wagner McPherson, Caryn B ^b   Hakim, Simin ^a   Del Mastro, Richard G ^c   Aziz, Naeema ^a   Baer, Elizabeth ^a   Gonzales, Genalyn ^a   Krane, Mary Carol ^a   Markovich, Rachelle ^a   Masny, Peter ^a   Ortega, Miguel ^a   Vu, John ^a   Vujicic, Marco ^a   Church, Deanna M ^a   Segal, Allan ^a   Grady, Deborah L ^d   Moyzis, Robert K ^d   Spence, M Anne ^a   Lovett, Michael ^e   Wasmuth, John J ^a   more..

^a UNIVERSITY OF CALIFORNIA   (United States)

^b WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c GENOME THERAPEUTICS CORPORATION   (United States)

^d LOS ALAMOS NATIONAL LABORATORY   (United States)

^e UNIVERSITY OF TEXAS SOUTHWESTERN MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ANIMAL CELL; ARTICLE; CHROMOSOME 5; CHROMOSOME MARKER; FLUORESCENCE IN SITU HYBRIDIZATION; GENE LOCUS; GENE MAPPING; HAMSTER; HUMAN; HUMAN CELL; HYBRID CELL; MAXIMUM LIKELIHOOD METHOD; MEDICAL GENETICS; MOLECULAR CLONING; NONHUMAN; PRIORITY JOURNAL; SEQUENCE TAGGED SITE;

ANIMALIA; CRICETINAE;

EID: 0030765301     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.7.9.897     Document Type: Article

References (26)

1. Altherr, M.R., S. Plummer, G. Bates, M. MacDonald, S. Taylor, H. Lehrach, A.M. Frischauf, J.F. Gusella, M. Boehnke, and J.J. Wasmuth. 1992. Radiation hybrid map spanning the Huntington disease gene region of chromosome 4. Genomics 13: 1040-1046.
2. Boehnke, M., K. Lange, and D.R. Cox. 1991. Statistical methods for multipoint radiation hybrid mapping. Am. J. Hum. Genet. 49: 1174-1188.
3. Cirullo, R.E., S. Dana, and J.J. Wasmuth. 1983. Efficient procedure for transferring specific human genes into Chinese hamster cell mutants: Interspecific transfer of the human genes encoding leucyl- and asparaginyl-tRNA synthetases. Mol. Cell. Biol. 3: 892-902.
4. Collins, F. and D. Gallas. 1993. A new five-year plan for U.S.: The human genome project. Science 262: 43-46.
5. Cox, D.R., M. Burmeister, E.R. Price, S. Kim, and R.M. Myers. 1990. Radiation hybrid mapping: A somatic cell genetic method for constructing high-resolution maps of mammalian chromosomes. Science 250: 245-250.
6. Dana, S. and J.J. Wasmuth. 1982. Selective linkage disruption in human-Chinese hamster cell hybrids: Deletion mapping of the leuS, hexB, emtB, and chr genes on human chromosome 5. Mol. Cell. Biol. 2: 1220-1228.
7. Dib, C., S. Faure, C. Fizames, D. Samson, N. Drouot, A. Vignal, P. Millasseau, S. Marc, J. Hazan, E. Seboun et al. 1996. A comprehensive genetic map of the human genome based on 5,264 microsatellites. Nature 380: 152-154.
8. Falk, C.T. 1991. A simple method for ordering loci using data from radiation hybrids. Genomics 9: 120-123.
9. Goss, S.J. 1976. Radiation-induced segregation of syntenic loci: A new approach to human gene mapping. Cytogenet. Cell Genet. 16: 138-141.
10. Goss, S.J. and H. Harris. 1975. New method for mapping genes in human chromosomes. Nature 255: 680-684.
11. _. 1977. Gene transfer by means of cell fusion I. Statistical mapping of the human X-chromosome by analysis of radiation-induced gene segregation. J. Cell Sci. 25: 17-37.
12. Hudson, T.J., L.D. Stein, S.S. Gerety, J. Ma, A.B. Castle, J. Silva, D.K. Slonim, R. Baptista, L. Kruglyak, S.H. Xu et al. 1995. An STS-based map of the human genome. Science 270: 1945-1954.
13. Lichter, P., S.A. Ledbetter, D.H. Ledbetter, and D.C. Ward. 1990. Fluorescence in situ hybridization with Alu and L1 polymerase chain reaction probes for rapid characterization of human chromosomes in hybrid cell lines. Proc. Natl. Acad. Sci. 87: 6634-6638.
14. McPherson, J.D., R.A. Morton, C.M. Ewing, J.J. Wasmuth, J. Overhauser, A. Nagafuchi, S. Tsukita, and W.B. Isaacs. 1994. Assignment of the human alpha-catenin gene (CTNNA1) to chromosome 5q21-q22. Genomics 19: 188-190.
15. Morton, N.E. 1991. Parameters of the human genome. Proc. Natl. Acad. Sci. 88: 7474-7476.
16. Munroe, D.J., M. Haas, E. Bric, T. Whitton, H. Aburatani, K. Hunter, D. Ward, and D.E. Housman. 1994. IRE-bubble PCR: A rapid method for efficient and representative amplification of human genomic DNA sequences from complex sources. Genomics 19: 506-514.
17. Overhauser, J., J. McMahan, and J.J. Wasmuth. 1987. Identification of 28 DNA fragments that detect RFLPs in 13 distinct physical regions of the short arm of chromosome 5. Nucleic Acids Res. 15: 4617-1627.
18. Prades, C., A.M. Laurent, Y. Yurov, J. Puechberty, and G. Roizes. 1996. A 19-allele polymorphic marker within the centromere of human chromosome 5. Cytogenet. Cell Genet. 72: 69-71.
19. Ryan, S.G., M.J. Dixon, M.A. Nigro, K.A. Kelts, O.N. Markand, J.C. Terry, R. Shiang, J.J. Wasmuth, and P. O'Connell. 1992. Genetic and radiation hybrid mapping of the hyperekplexia region on chromosome 5q. Am. J. Hum. Genet. 51: 1334-1343.
20. Schuler, G.D., M.S. Boguski, E.A. Stewart, L.D. Stein, G. Gyapay, K. Rice, R.E. White, P. Rodriguez-Tome, A. Aggarwal, E. Bajorek et al. 1996. A gene map of the human genome. Science 274: 540-546.
21. Takahashi, E., A. Hitomi, and Y. Nakamura. 1993. A high-resolution cytogenetic map of human chromosome 5: Localization of 206 new cosmid markers by direct R-banding fluorescence in situ hybridization. Genomics 17:234-236.
22. Thompson, T.G., K.E. Morrison, P. Kleyn, U. Bengtsson, T.C. Gilliam, K.E. Davies, J.J. Wasmuth, and J.D. McPherson. 1993. High resolution physical map of the region surrounding the spinal muscular atrophy gene. Hum. Mol. Genet. 2: 1169-1176.
23. Warrington, J.A. and U. Bengtsson. 1994. High-resolution physical mapping of human 5q31-q33 using three methods: Radiation hybrid mapping, interphase fluorescence in situ hybridization, and pulsed-field gel electrophoresis. Genomics 24: 395-398.
24. Warrington, J.A. and J.J. Wasmuth. 1996. A contiguous high-resolution radiation hybrid map of 44 loci from the distal portion of the long arm of human chromosome 5. Genome Res. 6: 628-632.
25. Warrington, J.A., L.V. Hall, L.M. Hinton, J.N. Miller, J.J. Wasmuth, and M. Lovett. 1991. Radiation hybrid map of 13 loci on the long arm of chromosome 5 [published erratum appears in Genomics 1992 14: 832.] Genomics 11: 701-708.
26. Warrington, J.A., S.K. Bailey, E. Armstrong, O. Aprelikova, K. Alitalo, G.M. Dolganov, A.S. Wilcox, J.M. Sikela, S.F. Wolfe, M. Lovett et al. 1992. A radiation hybrid map of 18 growth factor, growth factor receptor, hormone receptor, or neurotransmitter receptor genes on the distal region of the long arm of chromosome 5. Genomics 13: 803-808.