Leukemia breakpoint region in 3q21 is gene rich

Gene

Volumn 193, Issue 1, 1997, Pages 49-57

  Rynditch, Alla ^a,b   Pekarsky, Yuri ^a   Schnittger, Susanne ^c   Gardiner, Katheleen ^a  

^a UNIVERSITY OF DENVER   (United States)

^b INSTITUTE OF MOLECULAR BIOLOGY AND GENETICS   (Ukraine)

^c UNIVERSITY OF LÜBECK   (Germany)

Author keywords

3q21; AML; Breakpoint cluster region; Chromosome 3; Leukemia; Transcriptional mapping

Indexed keywords

COMPLEMENTARY DNA;

ARTICLE; CANCER CELL CULTURE; CENTROMERE; CHROMATIN; CHROMOSOME 3Q; CHROMOSOME BREAKAGE; CHROMOSOME DELETION; CHROMOSOME DUPLICATION; CHROMOSOME INVERSION; CHROMOSOME REARRANGEMENT; CONTROLLED STUDY; DNA STRAND BREAKAGE; DNA TRANSCRIPTION; FETUS; GENE CLUSTER; GENE MAPPING; HUMAN; HUMAN CELL; LEUKEMIA; PRIORITY JOURNAL; RECIPROCAL CHROMOSOME TRANSLOCATION;

CHROMOSOME BREAKAGE; CHROMOSOMES, HUMAN, PAIR 3; HELA CELLS; HL-60 CELLS; HUMANS; LEUKEMIA; LEUKEMIA, MYELOCYTIC, ACUTE; MOLECULAR SEQUENCE DATA; RESTRICTION MAPPING; RNA, MESSENGER; RNA, NEOPLASM; TRANSCRIPTION, GENETIC;

EID: 0030744158     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(97)00076-0     Document Type: Article

References (31)

1. Alimena, G., De Cuia, M., Diverio, D., Gastaldi, R. and Nanni, M., 1987. The karyotype of blast crisis. Cancer Genet. Cytogenet. 26, 39-50.
2. Chomczynski, P. and Sacchi, N., 1987. Single step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162, 156-159.
3. Church, D.M., Stotler, C.J., Rutter, J.L., Murrell, J.R., Trofatter, J.A. and Buckler, A.J., 1993. Isolation of genes from complex sources of mammalian genomic DNA using exon amplification. Nature Genet. 6, 99-105.
4. Elder, J.T., Forrester, W.C., Thompson, C., Mager, D., Henthorn, P., Peretz, M., Papayannopoulou, T. and Groudine, M., 1990. Translocation of an erythroid-specific sensitive site in deletion-type hereditary persistence of fetal hemoglobin. Mol. Cell. Biol. 10, 1382-1389.
5. Feinberg, A. and Vogelstein, B., 1984. A technique for radiolabelling DNA to high specific activity. Anal. Biochem. 137, 266-268.
6. Fichelson, S., Dreyfus, F., Berger, R., Melle, J., Bastard, C., Miclea, J.M. and Gisselbrecht, S., 1992. Evi-1 expression in leukemic patients with rearrangements of the 3Q25-Q28 chromosomal region. Leukemia 6, 93-99.
7. Fonatsch, C., Gudat, H., Lengfelder, E., Wandt, H., Silling-Engelhardt, G., Ludwig, W.-D., Thiel, E., Freund, M., Bodenstein, H., Schwieder, G., Grunselsen, A., Aul, C., Schnittger, S., Rieder, H., Haase, D. and Hild, F., 1994. Correlation of cytogenetic findings with clinical features in 18 patients with inv(3)(q21q26) or t(3;3)(q21;q26). Leukemia 8, 1318-1326.
8. Horseman, D.E., Gascoyne, R.D. and Barnett, M.J., 1995. Acute leukaemia with structural rearrangements of chromosome 3. Leuk. Lymphoma 16, 369-377.
9. Kawasaki, E.S., 1990. Amplification of RNA. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. and White, T.J. (Eds.), PCR Protocols: a Guide to Methods and Applications. Academic Press, NY, pp. 21-27.
10. Kellum, R. and Schedl, P., 1991. A position-effect assay for boundaries of higher order chromosomal domains. Cell 64, 941-950.
11. Levy, E.R., Parganas, E., Morishita, K., Fichelson, S., James, L., Oscier, D., Gisselbrecht, S., Ihle, J.N. and Buckle, V.J., 1994. DNA rearrangements proximal to the EVI1 locus associated with the 3q21q26 syndrome. Blood 83, 1348-1354.
12. Lovering, R., Hanson, I.M., Borden, K.L., Martin, S., O'Reilly, N.J., Evan, G.I., Rahman, D., Pappin, D.J., Trowsdale, J. and Freemont, P.S., 1993. Identification and preliminary characterization of a protein motif related to zinc finger. Proc. Natl. Acad. Sci. USA 90, 2112-2116.
13. Lovett, M., 1994. Fishing for complements: finding genes by direct selection. Trends Genet. 10, 352-357.
14. Madisen, L. and Groudine, M., 1994. Identification of a locus control region in the immunoglobulin heavy-chain locus that deregulates c-myc expression in plasmacytoma and Burkitt's lymphoma cells. Genes Dev. 8, 2216-2226.
15. Miller, R.J. and Sutcliffe, J.G., 1983. Gene expression in rat brain. Nucleic Acids Res. 11, 5497-5520.
16. Mitelman, F. and Heim, S., 1992. Quantitative acute leukemia cytogenetics. Genes Chromosomes Cancer 5, 57-66.
17. Morgan, J.G., Dolganov, G.M., Robbins, S.E., Hinton, L.M. and Lovett, M., 1992. The selective isolation of novel cDNAs encoded by the regions surrounding the human interleukin 4 and 5 genes. Nucleic Acids Res. 20, 5173-5179.
18. Morishita, K., Parker, D.S., Mucenski, M.L., Jenkins, N.A., Copeland, N.G. and Ihle, J.N., 1988. Retroviral activation of a novel gene encoding a zinc finger protein in IL-3-dependent myeloid leukemia cell lines. Cell 54, 831-840.
19. Morishita, K., Parganas, E., Willman, C.L., Whittaker, M.H., Drabkin, H., Oval, J., Taetle, R., Valentine, M.B. and Ihle, J.N., 1992. Activation of EVI1 gene expression in human acute myelogenous leukemias by translocations spanning 300-400 kilobases on chromosome band 3q26. Proc. Natl. Acad. Sci. USA 89, 3937-3941.
20. Nucifora, G., Birn, D.J., Erickson, P., Gao, J., LeBeau, M.M., Drabkin, H.A. and Rowley, J.D., 1993. Detection of DNA rearrangements in the AML1 and ETO loci and of an AML1/ETO fusion mRNA in patients with t(8;21) acute myeloid leukemia. Blood 81, 883-888.
21. Oval, J., Jones, O.W., Montoya, M. and Taetle, R., 1990. Characterization of a factor-dependent acute leukemia cell line with translocation (3;3)(q21;q26). Blood 76, 1369-1374.
22. Parimoo, S., Pantanjhali, S.R., Shukla, G., Chaplin, D.D. and Weissman S.M., 1991. cDNA selections: efficient PCR approach for the selection of cDNAs encoded in large chromosomal DNA fragments. Proc. Natl. Acad. Sci. USA 88, 9623-9627.
23. Pekarsky, Y., Zabarovsky, E., Kashuba, V., Drabkin, H., Sandberg, A.A., Morgan, R., Rynditch, A. and Gardiner, K., 1995. Cloning of breakpoints in 3q21 associated with hematologic malignancy. Cancer Genet. Cytogenet. 80, 1-8.
24. Rimokh, R., Berger, F., Bastard, C., Klein, B., French, M., Archimbaud, E., Rouault, J.P., Santa Lucia, B., Duret, L., Vuillaume, M., Coiffier, B., Bryon, P.-A. and Magaud, J.P., 1994. Rearrangements of CCND1 (BCL1/PRAD1) 3′ untranslated region in mantle-cell lymphomas and t(11q13)-associated leukemias. Blood 83, 3689-3696.
25. Russell, M., List, A., Greenberg, P., Woodward, S., Glinsmann, B., Parganas, E., Ihle, J. and Taetle, R., 1994. Expression of EVI1 in myelodysplastic syndromes and other hematologic malignancies without 3q26 translocations. Blood 84, 1243-1248.
26. Sambrook, J., Fritsch, E.F. and Maniatis, T., 1989. Molecular Cloning. A Laboratory Manual, 2nd ed. CSHL Press, Cold Spring Harbor, NY.
27. Secker-Walker, L.M., Mehta, A. and Bain, B., 1995. Abnormalities of 3q21 and 3q26 in myeloid malignancy: a United Kingdom cancer cytogenetic group study. Br. J. Haematol. 91, 490-501.
28. Sherrington, R., Rogaev, E.I., Liang, Y., Rogaeva, E.A., Levesque, G., Ikeda, M., Chi, H., Lin, C., Li, G., Holman, K., Tsude, T., Mar, L., Foncin, J.-F., Bruni, A.C., Montesi, M.P., Sorbi, S., Rainer, I., Pinessi, L., Nee, L., Chumakov, I., Pollen, D., Brookes, A., Sanseau, P., Polinsky, R.J., Wasco, W., Da Silve, H.A.R., Haines, J.L., Pericak-Vance, M.A., Tanzi, R.E., Roses, A.D., Fraser, P.E., Rommens, J.M. and St. George-Hyslop, P.H., 1995. Cloning of a gene bearing missense mutations in early-onset familial Alzheimer's disease. Nature 375, 754-761.
29. Suzukawa, K., Parganas, E., Gajjar, A., Abe, T., Takahashi, S., Tani, K., Asano, S., Asou, H., Kamada, N., Yokota, J., Morishita, K. and Ihle, J.N., 1994. Identification of a breakpoint cluster region 3′ of the ribophorin 1 gene at 3q21 associated with the transcriptional activation of the EVI1 gene in acute myelogenous leukemias with inv(3)(q21q26). Blood 84, 2681-2688.
30. Uberbacher, E.C. and Mural, R.J., 1991. Locating protein-coding regions in human DNA sequences by a multiple sensor-neural network approach. Proc. Natl. Acad. Sci. USA 88, 11261-11265.
31. Williams, M.E., Swerdlow, S.H., Rosenberg, C.L. and Arnold, A., 1993. Chromosome 11 translocation breakpoints at the PRAD1/ cyclin D1 gene locus in centrocytic lymphoma. Leukemia 7, 241-245.