Effects of natural and synthetic polyamines on the conformation of an oligodeoxyribonucleotide with the estrogen response element

Nucleic Acids Research

Volumn 25, Issue 12, 1997, Pages 2396-2402

  Thomas, Thresia ^a,b,d   Kulkarni, Gayathri D ^a   Gallo, Michael A ^b   Greenfield, Norma ^a   Lewis, Joan S ^a   Shirahata, Akira ^c   Thomas, T J ^a  

^a Department of Emergency Medicine   (United States)

^b RUTGERS UNIVERSITY   (United States)

^c JOSAI UNIVERSITY   (Japan)

^d ROBERT WOOD JOHNSON MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BUFFER; DNA A; ESTROGEN; ESTROGEN RECEPTOR; OLIGODEOXYRIBONUCLEOTIDE; POLYAMINE; PUTRESCINE; SODIUM CHLORIDE; SPERMIDINE; SPERMINE; SPERMINE DERIVATIVE; TROMETAMOL;

ARTICLE; CIRCULAR DICHROISM; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; DNA BASE COMPOSITION; DNA CONFORMATION; ELECTROPHORETIC MOBILITY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL;

BASE SEQUENCE; BINDING SITES; CIRCULAR DICHROISM; DNA; ESTROGENS; NUCLEIC ACID CONFORMATION; OLIGODEOXYRIBONUCLEOTIDES; POLYAMINES; SPERMINE; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 0030740990     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/25.12.2396     Document Type: Article

References (56)

1. Tabor, C.W. and Tabor, H. (1984) Annu. Rev. Biochem. 53, 749-790.
2. Pegg, A.E. (1988) Cancer Res. 48, 759-774.
3. Marion, L.J. and Morris, D.R. (1987) In McCann, P.P., Pegg, A.E. and Sjoerdsma, A. (eds), Inhibition of Polyamine Metabolism, Biological Significance and Basis for New Therapies. Academic Press, New York, pp. 79-105.
4. Sarhan, S. and Seiler, N. (1989) Biol. Chem. Hoppe-Seyler 370, 1279-1284.
5. Gosule, L.C. and Schellman, J.A. (1976) Nature 259, 333-3335.
6. Wilson, R.W. and Bloomfield, V.A. (1979) Biochemistry 18, 2192-2196.
7. Behe, M. and Felsenfeld, G. (1981) Proc. Natl. Acad. Sci. USA. 78, 1619-1623.
8. Thomas, T.J. and Bloomfield, VA. (1985) Biochemistry 24, 713-719.
9. Thomas, T.J. and Messner, R.P. (1988) J. Mol. Biol. 201, 463-467.
10. Zhurkin, V.B., Lysov, Y.P. and Ivanov, V.I. (1980) Biopolymers 19, 1415-1428.
11. Egli, M., Williams, L.D., Gao, Q. and Rich, A. (1991) Biochemistry 30, 11388-11402.
12. Jain, S., Zon, G. and Sundaralingam, M. (1989) Biochemistry 28, 2360-2366.
13. Schmid, N. and Behr, J.P. (1991) Biochemistry 30, 4357-4361.
14. Feuerstein, B.G., Williams, L.D., Basu, H.K. and Marton, L.J. (1991) J. Cell. Biochem. 46, 37-47.
15. Thomas, T. and Thomas, T.J. (1993) Biochemistry 32, 14068-14074.
16. Musso, M., Thomas, T., Shirahata, A., Sigal, L.H., Van Dyke, M.W. and Thomas, T.J. (1997) Biochemistry 36, 1441-1449.
17. Sabbah, M., Ricousse, S.L., Redeuilh, G. and Baulieu, E.E. (1992) Biochem, Biophys. Res. Commun. 185, 944-952.
18. Pangiotides, C.A., Artandi, S., Calame, K. and Silverstein, S.J. (1995) Nucleic Acids Res., 23, 1800-1809.
19. Thomas, T. and Kiang, D.T. (1988) Nucleic Acids Res. 16, 4705-4720.
20. Thomas, T., Gallo, M.A., Klinge, C.M. and Thomas, T.J. (1995) J. Steroid Biochem. Mol. Biol. 54, 89-99.
21. Thomas, T., Trend, B., Butterfield, J.B., Jänne, O.A. and Kiang, D.T. (1989) Cancer Res. 49, 5852-5857.
22. Thomas, T. and Kiang, D.T. (1987) Biochem. Biophys. Res. Commun. 148, 1338-1345.
23. Katzenellenbogen, J.A., O'Malley, B.W. and Katzenellenbogen, B.S. (1996) Mol. Endocrinol. 10, 119-131.
24. Beato, M., Herrlich, P. and Schütz, G. (1995) Cell 83, 851-857.
25. Lannigan, D.A., Koszewski, N.J. and Notides, A.C. (1993) Mol. Cell. Endocrinol. 94, 47-54.
26. Lannigan, D.A., Tomashek, J.J., Obourn, J.D. and Notides, A.C. (1993) Biochem. Pharmacol. 45, 1921-1928.
27. Lannigan, D.A. and Notides, A.C. (1989) Proc. Natl. Acad. Sci. USA 86, 863-867.
28. Thomas, T. and Thomas, T.J. (1993) J. Receptor Res. 13, 1115-1133.
29. He, Y., Suzuki, T., Kashiwagi, K., Kusama-Eguchi, K., Shirahata, A. and Igarashi, K. (1994) Eur. J. Biochem. 221, 391-398.
30. Shirahata, A., Hosoda, H., Takahashi, N., Beppu, T., Niitsu, M. and Samejima, K. (1995) Biol. Pharm. Bull. (Tokyo) 18, 355-359.
31. Samejima, K., Takeda, Y., Kawase, M., Okada, M. and Kyougoku, Y. (1984) Chem. Pharm. Bull. (Tokyo) 32, 3428-3435.
32. Burch, J.B.E. (1984) Nucleic Acids Res. 12, 1117-1135.
33. Murdoch, F.E., Grunwald, K.A.A. and Gorski, J. (1991) Biochemistry 30, 10838-10844.
34. Ausubel, F.M., Brent, R., Kingston, R.E., Moore, D.D., Smith, J.A., Seidman, J.G. and Struhl, K. (1987) Current Protocols in Molecular Biology. Wiley Interscience, pp. 3.1.1-3.3.15.
35. Fasman, G.D. (ed.) Handbook of Biochemistry and Molecular Biology (1975) 3rd edn, Nucleic Acids, Vol. 1, CRC Press, Cleveland, OH, pp. 589.
36. Gray, D.M., Hung, S.-H. and Johnson, K.H. (1995) Methods Enzymol. 246, 19-35.
37. Goto, S. (1984) Biopolymers 23, 2211-2222.
38. Johnson, W.C. Jr. (1996) In Fasman, G.D. (ed.), Circular Dichroism and the Conformational Analysis of Biomolecules. Plenum Press, New York, pp. 433-468.
39. Minyat, E.E., Ivanov, V.I., Kritzyn, A.M., Minchenkova, L.E. and Schyolkina, A.K. (1978) J. Mol. Biol. 128, 397-409.
40. Marton, L.J. and Pegg, A.E. (1995) Annu. Rev. Pharmacol. Toxicol. 35, 55-91.
41. Thomas, T.J., Canellakis, Z.N. and Bloomfield, V.A. (1985) Biopolymers 24, 725-729.
42. Lyubchenko, Y.L., Shlyakhtenko, L.S., Appella, E. and Harrington, R.E. (1993) Biochemistry 32, 4121-4127.
43. Robinson, H. and Wang, A.H.-J. (1996) Nucleic Acids Res. 24, 676-682.
44. Jain, S., Zon, G. and Sundaralingam, M. (1989) Biochemistry 28, 2360-2364.
45. Thomas, T.J. and Bloomfield, V.A. (1983) Biopolymers 22, 1097-1106.
46. Wilson, R.W. and Bloomfield, V.A. (1979) Biochemistry 18, 2192-2196.
47. Subirana, J. and Vives, J.L. (1981) Biopolymers 20, 2281-2283.
48. Rau, D.C. and Parsegian, V.A. (1992) Biophys. J. 61, 246-259.
49. Pelta, J., Durand, D., Doucet, J. and Livolant, F. (1996) Biophys. J. 71, 48-63.
50. Reich, Z., Ghirlando, R. and Minsky, A. (1991) Biochemistry 30, 7828-7836.
51. Reich, Z., Levin-Zaidman, S., Gutman, S.B., Arad, T. and Minsky, A. (1994) Biochemistry 33, 14177-14184.
52. Baeza, I., Gariglio, P., Rangel, L.M., Chavez, P., Cervantes, L., Arguello, C., Wong, C. and Montanez, C. (1987) Biochemistry 26, 6387-6392.
53. Tari, LW. and Secco, A.S. (1995) Nucleic Acids Res. 23, 2065-2073.
54. Hagerman, P.J. (1990) Annu. Rev. Biochem. 59, 755-781.
55. Halachmi, S., Marden, E., Martin, G., MacKay, H., Abbondanza, C. and Brown, M. (1994) Science 264, 1455-1458.
56. Zeiner, M. and Gehring, U. (1995) Proc. Natl. Acad. Sci. USA 92, 11465-11469.