Increased informativeness of RAPD analysis by detection of microsatellite motifs

BioTechniques

Volumn 23, Issue 2, 1997, Pages 285-290

  Ramser, Juliane ^a   Weising, Kurt ^a   Chikaleke, Viktor ^b   Kahl, Günter ^a,c  

^a GOETHE UNIVERSITY   (Germany)

^b INTERNATIONAL INSTITUTE OF TROPICAL AGRICULTURE   (Nigeria)

^c Biozentrum ^*  (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ETHIDIUM BROMIDE; MICROSATELLITE DNA; PHOSPHORUS 32; PLANT DNA;

ARTICLE; AUTORADIOGRAPHY; CONTROLLED STUDY; DNA HYBRIDIZATION; GEL ELECTROPHORESIS; GENETIC VARIABILITY; IMMUNOBLOTTING; NONHUMAN; PLANT LEAF; POLYMERASE CHAIN REACTION; RANDOM AMPLIFIED POLYMORPHIC DNA; REPRODUCIBILITY;

DIOSCOREA; DIOSCOREA ALATA;

EID: 0030740518     PISSN: 07366205     EISSN: None     Source Type: Journal    
DOI: 10.2144/97232st04     Document Type: Article

References (19)

1. Beckmann, J.S. and J.L. Weber. 1992. Survey of human and rat microsatellites. Genomics 12:627-631.
2. Caetano-Anollés, G., B.J. Bassam and P.J. Gresshoff. 1991. DNA amplification finger-printing using very short arbitrary oligonucleotide primers. Bio/Technology 9:553-557.
3. Cifarelli, R.A., M. Galitelli and F. Cellini. 1995. Random amplified hybridization microsatellites (RAHM): isolation of a new class of microsatellite-containing clones. Nucleic Acids Res. 23:3802-3803.
4. Don, R.H., P.T. Cox, B.J. Wainwright, K. Baker and J.S. Mattick. 1991. Touchdown' PCR to circumvent spurious priming during gene amplification. Nucleic Acids Res. 19:4008.
5. Doyle, J.J. and J.L. Doyle. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19:11-15.
6. Ellsworth, D.L., K.D. Rittenhouse and R.L. Honeycutt. 1993. Artifactual variation in randomly amplified polymorphic DNA banding patterns. BioTechniques 14:214-217.
7. Ender, A., K. Schwenk, T. Städler, B. Streit and B. Schierwater. 1996. RAPD identification of microsatellites in Daphnia. Mol. Ecol. 5:437-441.
8. Gupta, M., Y.-S. Chyi, J. Romero-Severson and J.L. Owen. 1994. Amplification of DNA markers from evolutionary diverse genomes using single primers of simple-sequence repeats. Theor. Appl. Genet. 89:998-1006.
9. Miyada, C.G. and R.B. Wallace. 1987. Oligonucleotide hybridization techniques. Methods Enzymol. 154:94-107.
10. Muralidharan, K. and E.K. Wakeland. 1993. Concentration of primer and template qualitatively affects products in random-amplified polymorphic DNA PCR. BioTechniques 14:362-364.
11. Richardson, T., S. Cato, J. Ramser, G. Kahl and K. Weising. 1995. Hybridization of microsatellites to RAPD: a new source of polymorphic markers. Nucleic Acids Res. 23:3798-3799.
12. Rieseberg, L.H. 1996. Homology among RAPD fragments in interspecific comparisons. Mol. Ecol. 5:99-105.
13. Tingey, S.V. and J.P. del Tufo. 1993. Genetic analysis with random amplified polymorphic DNA markers. Plant Physiol. 101:349-352.
14. Wang, Z., J.L. Weber, G. Zhong and S.D. Tanksley. 1994. Survey of plant short tandem repeats. Theor. Appl. Genet. 88:1-6.
15. Weising, K., R.G. Atkinson and R.C. Gardner. 1995. Genomic fingerprinting by microsatellite-primed PCR: a critical evaluation. PCR Methods Appl. 4:249-255.
16. Weising, K., H. Nybom, K. Wolff and W. Meyer. 1995. DNA Fingerprinting in Plants and Fungi, p. 157-234. CRC Press, Boca Raton.
17. Welsh, J. and M. McClelland. 1990. Finger-printing genomes using PCR with arbitrary primers. Nucleic Acids Res. 18:7213-7218.
18. Williams, J.G.K., A.R. Kubelik, K.J. Livak and J.A. Rafalski. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 25:6531-6535.
19. Zietkiewicz, E., A. Rafalski and D. Labuda. 1994. Genome fingerprinting by simple sequence repeats (SSR)-anchored PCR amplification. Genomics 20:176-183.