Structural characterization of Paracoccus denitrificans cytochrome c peroxidase and assignment of the low and high potential heme sites

Biochemistry

Volumn 36, Issue 26, 1997, Pages 7958-7966

  Hu, Wei ^a   Van Driessche, Gonzalez ^a   Devreese, Bart ^a   Goodhew, Celia F ^c   McGinnity, Dermot F ^c   Saunders, Neil ^c   Fulop, Vilmos ^b   Pettigrew, Graham W ^c   Van Beeumen, Jozef J ^a  

^a GHENT UNIVERSITY   (Belgium)

^b UNIVERSITY OF OXFORD   (United Kingdom)

^c UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME C PEROXIDASE;

ALPHA HELIX; AMINO ACID SEQUENCE; ARTICLE; BINDING SITE; CONFORMATIONAL TRANSITION; ENZYME ACTIVE SITE; ENZYME SPECIFICITY; ENZYME STRUCTURE; GENE ASSIGNMENT; HEME SYNTHESIS; NONHUMAN; OPEN READING FRAME; PARACOCCUS DENITRIFICANS; PRIORITY JOURNAL; PROTEIN DOMAIN; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BINDING SITES; CYTOCHROME-C PEROXIDASE; HEME; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; PARACOCCUS DENITRIFICANS; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PSEUDOMONAS AERUGINOSA; SEQUENCE HOMOLOGY, AMINO ACID;

ESCHERICHIA COLI; PARACOCCUS DENITRIFICANS; PSEUDOMONAS; PSEUDOMONAS AERUGINOSA;

EID: 0030739210     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi963131e     Document Type: Article

References (36)

1. Aebersold, R. H., Leavitt, J., Saavedra, R. A., Hood, L. E., & Kent, S. H. B. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 6970-6974.
2. Arciero, D. M., & Hooper, A. B. (1994) J. Biol. Chem. 269, 11878-11886.
3. Baumann, U., Wu, S., Flaherty, K. M., & McKay, D. B. (1993) EMBO J. 12, 3357-3364.
4. Benning, M. M., Meyer, T. E., & Holden, H. M. (1994) Arch. Biochem. Biophys. 310, 460-466.
5. Chistoserdov, A. Y., Chistoserdova, L. V., McIntire, W. S., & Lidstrom, M. E. (1994a) J. Bacteriol. 176, 4052-4065.
6. Chistoserdov, A. Y., McIntire, W. S., Mathews, F. S., & Lidstrom, M. E. (1994b) J. Bacteriol. 176, 4073-4080.
7. Ellfolk, N., Ronnberg, M., Aasa, R., Andreasson, L. E., & Vanngard, T. (1983) Biochim. Biophys, Acta 743, 23-30.
8. Ellfolk, N., Ronnberg, M., & Osterlund, K. (1991) Biochim. Biophys. Acta 1080, 68-77.
9. Foote, N., Peterson, J., Gadsby, P. M. A., Greenwood, C., & Thomson, A. J. (1984) Biochem. J. 223, 369-378.
10. Fulop, V., Moir, J. W. B., Ferguson, S. J., & Hajdu, J. (1995a) Cell 81, 369-377.
11. Fulop, V., Ridout, C. J., Greenwood, C., & Hajdu, J. (1995b) Structure 3, 1225-1233.
12. Geourjon, C., & Deleage, G. (1994) Protein Eng. 7, 157-164.
13. Gilmour, R., Goodhew, C. F., Pettigrew, G. W., Prazeres, S., Moura, I., & Moura, J. J. (1993) Biochem. J. 294, 745-752.
14. Gilmour, R., Goodhew, C. F., Pettigrew, G. W., Prazeres, S., Moura, J. J., & Moura, I. (1994) Biochem. J. 300, 907-914.
15. Gilmour, R., Prazeres, S., McGinnity, D. F., Goodhew, C. F., Moura, J. J. G., Moura, I., & Pettigrew, G. W. (1995) Eur. J. Biochem. 234, 878-886.
16. Goodhew, C. F., Wilson, I. B., Hunter, D. J., & Pettigrew, G. W. (1990) Biochem. J. 271, 707-712.
17. Hanlan, S. P., Hold, R. A., & McEwan, A. G. (1992) FEMS Lett. 97, 283-288.
18. Iobbi-Nivol, C., Crooke, H., Griffiths, L., Grove, J., Hussain, H., Pommier, J., Mejean, V., & Cole, J. A. (1994) FEMS Microbiol. Lett. 119, 89-94.
19. Laemmli, U. K. (1970) Nature 227, 680-685.
20. Matsuura, Y., Takano, T., & Dickerson, R. E. (1982) J. Mol. Biol. 156, 389-409.
21. McGinnity, D. F., Devreese, B., Prazeres, S., Van Beeumen, J., Moura, I., Moura, J. J. G., & Pettigrew, G. W. (1996) J. Biol. Chem. 271, 11126-11123.
22. Moore, G. R., & Pettigrew, G. W. (1990a) in Cytochromes c. Evolutionary, Structural and Physicochemical Aspects, pp 115-159, Springer-Verlag, Berlin, Germany.
23. Moore, G. R., & Pettigrew, G. W. (1990b) in Cytochromes c. Evolutionary, Structural and Physicochemical Aspects, pp 27-113, Springer-Verlag, Berlin, Germany.
24. Pettigrew, G. W. (1991) Biochim. Biophys. Acta 1058, 25-27.
25. Poulos, T. L., Edwards, S. L., Wariishi, H., & Gold, M. H. (1993) J. Biol. Chem. 268, 4429-4440.
26. Prazeres, S., Moura, J. J. G., Moura, I., Gilmour, R., Goodhew, C. F., Pettigrew, G. W., Ravi, N., & Huynh, B. H. (1995) J. Biol. Chem. 270, 24264-24269.
27. Ridout, C. J., James, R., & Greenwood, C. (1995) FEBS Lett. 365, 152-154.
28. Ronnberg, M., & Ellfolk, N. (1979) Biochim. Biophys. Acta 581, 325-333.
29. Samyn, B., Berks, B. C., Page, M. D., Ferguson, S. J., & Van Beeumen, J. J. (1994) Eur. J. Biochem. 219, 585-594.
30. Samyn, B., Van Craenenbroeck, K., De Smet, L., Vandenberghe, I., Pettigrew, G., & Van Beeumen, J. (1995) FEBS Lett. 377, 145-149.
31. Sofia, H. J., Burland, V., Daniels, D. L., Plunkett, G., & Blattner, F. R. (1994) Nucleic Acids Res. 22, 2576-2586.
32. Soininen, R., & Ellfolk, N. (1972) Acta Chem. Scand. 26, 861-872.
33. Sone, N., & Yangita, Y. (1982) Biochim. Biophys. Acta 682, 216-226.
34. Takano, T., & Dickerson, R. E. (1981) J. Mol. Biol. 153, 79-94.
35. van der Palen, C. J., Slotboom, D. J., Jongejan, L., Reijnders, W. N., Harms, N., Duine, J. A., & van Spanning, R. J. (1995) Eur. J. Biochem. 230, 860-871.
36. Williams, P. A., Fulop, V., Leung, Y. C., Chan, C., Moir, J. W. B., Howlett, G., Ferguson, S. J., Radford, S. E., & Hajdu, J. (1995) Nat. Struct. Biol. 2, 975-982.