The enigma of pX: A host-dependent cis-acting element with variable effects on tombusvirus RNA accumulation

Virology

Volumn 237, Issue 1, 1997, Pages 56-65

  Scholthof, Herman B ^a   Jackson, Andrew O ^b  

^a TEXAS A AND M UNIVERSITY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; GENE SEQUENCE; MAJOR GENE; NONHUMAN; OPEN READING FRAME; PLANT VIRUS; PRIORITY JOURNAL; TOMATO; TOMBUSVIRUS;

CHENOPODIUM QUINOA; CUCUMIS SATIVUS; LYCOPERSICON ESCULENTUM; NICOTIANA BENTHAMIANA; TOMATO BUSHY STUNT VIRUS; TOMBUSVIRUS;

EID: 0030713998     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1997.8754     Document Type: Article

References (39)

1. Boyko V. P., Karasev A. V. Tombusvirus genome may encode the sixth small protein near its 3′ terminus. Virus Genes. 6:1992;143-148.
2. Brown C. M., Dinesh-Kumar S. P., Miller W. A. Local and distant sequences are required for efficient readthrough of the barley yellow dwarf virus PAV coat protein gene stop codon. J. Virol. 70:1996;5884-5892.
3. Buck K. W. Comparison of the replication of positive-stranded RNA viruses of plants and animals. Adv. Virus Res. 47:1996;159-251.
4. Chang Y. C., Borja M., Scholthof H. B., Jackson A. O., Morris T. J. Host effects and sequences essential for accumulation of defective interfering RNAs of cucumber necrosis and tomato bushy stunt tombusviruses. Virology. 210:1995;41-53.
5. Dalmay T., Rubino L. Replication of cymbidium ringspot virus satellite RNA mutants. Virology. 206:1995;1092-1098.
6. Dalmay T., Rubino L., Burgyan J., Kollar A., Russo M. Functional analysis of cymbidium ringspot virus genome. Virology. 194:1993a;697-704.
7. Dalmay T., Russo M., Burgyan J. Repairin vivo. Virology. 192:1993b;551-555.
8. Danthinne X., Seurinck J., Meulewaeter F., van Montagu M., Cornellissen M. The 3′ untranslated region of satellite tobacco necrosis virus RNA stimulates translation in vitro. Mol. Cell. Biol. 13:1993;3340-3349.
9. Duggal R., Lahser F. C., Hall T. C. Cis-acting sequences in the replication of plant viruses with plus-sense RNA genomes. Ann. Rev. Phytopath. 32:1994;287-309.
10. Edskes H. K., Kiernan J., Shepherd R. J. Efficient translation of distal cistrons of a polycistronic mRNA of a plant pararetrovirus requires a compatible interaction between the mRNA 3′ end and the proteinaceous trans-activator. Virology. 224:1996;564-567.
11. Gallie D. R. The cap and poly(A)tail function synergistically to regulate mRNA translational efficiency. Genes Dev. 5:1991;2108-2116.
12. Gallie D. R. Translational control of cellular and viral mRNAs. Plant Mol. Biol. 32:1996;145-158.
13. Gallie D. R., Kobayashi M. The role of the 3′-untranslated region of non-polyadenylated plant viral mRNAs in regulating translational efficiency. Gene. 142:1994;159-165.
14. Hagan K. W., Ruiz-Echevarria M. J., Quan Y., Peltz S. W. Characterization of cis-acting sequences and decay intermediates involved in nonsense-mediated mRNA turnover. Mol. Cell. Biol. 15:1995;809-823.
15. Hann L. E., Webb A. C., Cai J. M., Gehrke L. Identification of a competitive translation determinant in the 3′ untranslated region of alfalfa mosaic virus coat protein mRNA. Mol. Cell. Biol. 17:1997;2005-2013.
16. Hearne P. Q., Knorr D. A., Hillman B. I., Morris T. J. The complete genome structure and synthesis of infectious RNA from clones of tomato bushy stunt virus. Virology. 177:1990;141-151.
17. Hennigan A. N., Jacobson A. Functional mapping of the translation-dependent instability element of yeast MAT-alpha-1 mRNA. Mol. Cell. Biol. 16:1996;3833-3843.
18. Hentze M. W. eIF4G: A multipurpose ribosome adapter. Science. 275:1997;500-501.
19. Knorr D. A., Mullin R. H., Hearne P. Q., Morris T. J. De novo. Virology. 181:1991;193-202.
20. Kollar A., Burgyan J. Evidence that ORF1 and 2 are the only virus-encoded replicase genes of Cymbidium ringspot tombusvirus. Virology. 201:1994;169-172.
21. Leathers V., Tanguay R., Kobayashi M., Gallie D. R. A phylogenetically conserved sequence within viral 3′ untranslated RNA pseudoknots regulates translation. Mol. Cell. Biol. 13:1993;5331-5347.
22. Mohan B. R., Dinesh-Kumar S. P., Miller W. A. Genes andcis. Virology. 212:1995;186-195.
23. Quadt R., Ishikawa M., Janda M., Ahlquist P. Formation of brome mosaic virus RNA-dependent RNA polymerase in yeast requires coexpression of viral proteins and viral RNA. Proc. Natl. Acad. Sci. USA. 92:1995;4892-4896.
24. C. Riviere, J. Johnston, D. Rochon, 1993, Analysis of the expression and function of a sixth small protein encoded near the 3′ terminus of the cucumber necrosis virus genome, Davis, CA.
25. T. Rubio, M. Borja, H. B. Scholthof, P. Feldstein, A. O. Jackson, 1996, Expression of defective interfering RNAs (DIs) in transgenic plants confers resistance to TBSV infection, London, Ontario, Canada.
26. Russo M., Burgyan J., Martelli G. P. Molecular biology of Tombusviridae. Adv. Virus Res. 44:1994;381-428.
27. Sambrook J., Fritsch E. F., Maniatis T. Molecular Cloning: A Laboratory Manual. 1989;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
28. Scholthof H. B., Borja M., Morris T. J., Jackson A. O. Molecular approaches for control of tomato bushy stunt virus. Molecular Biology of Tomato: Fundamental Advances and Crop Improvement. 1993a;Technomic Publishing, Lancaster. p. 239-249.
29. Scholthof H. B., Gowda S., Wu F. C., Shepherd R. J. The full-length transcript of a caulimovirus is a polycistronic mRNA whose genes are trans activated by the product of gene VI. J. Virol. 66:1992;3131-3139.
30. Scholthof H. B., Morris T. J., Jackson A. O. The capsid protein gene of tomato bushy stunt virus is dispensable for systemic movement and can be replaced for localized expression of foreign genes. Mol. Plant-Microbe Interact. 6:1993b;309-322.
31. Scholthof H. B., Scholthof K.-B. G., Kikkert M., Jackson A. O. Tomato bushy stunt virus spread is regulated by two nested genes that function in cell-to-cell movement and host-dependent systemic invasion. Virology. 213:1995a;425-438.
32. Scholthof K.-B. G., Hillman B. I., Modrell B., Heaton L. A., Jackson A. O. Characterization and detection of sc4: A sixth gene encoded by Sonchus yellow net virus. Virology. 204:1994;279-288.
33. Scholthof K.-B. G., Scholthof H. B., Jackson A. O. The tomato bushy stunt virus replicase proteins are coordinately expressed and membrane associated. Virology. 208:1995b;365-369.
34. Timmer R. T., Benkowski L. A., Schodin D., Lax S. R., Metz A. M., Ravel J. M., Browning K. S. The 5′ and 3′ untranslated regions of satellite tobacco necrosis virus RNA affect translational efficiency and dependence on a 5′ cap structure. J. Biol. Chem. 268:1993;9504-9510.
35. van Bokhoven H., Gall O. L., Kasteel D., Verver J., Wellink J., van Kammen A. Cis- and trans-acting elements in cowpea mosaic virus RNA replication. Virology. 195:1993;377-386.
36. Wang S., Miller W. A. A sequence located 4.5 to 5.0 kilobases from the 5′ end of the barley yellow dwarf virus (PAV) genome strongly stimulates translation of uncapped mRNA. J. Biol. Chem. 270:1995;13446-13452.
37. Weiland J. J., Dreher T. W. Cis-preferential replication of the turnip yellow mosaic virus genome. Proc. Natl. Acad. Sci. USA. 90:1993;6095-6099.
38. Weiss I. M., Liebhaber S. A. Erythroid cell-specific mRNA stability elements in the alpha-2-globin 3′ nontranslated region. Mol. Cell. Biol. 15:1995;2457-2465.
39. Zhou H., Jackson A. O. Expression of barley stripe mosaic virus RNAβ Virology. 216:1996;367-379.