-
1
-
-
0028278158
-
Structural and functional diversity among bacterial interspersed mosaic elements (BIMEs)
-
Bachellier, S., Saurin, W., Perrin, D., Hofnung, M., and Gilson, E. (1994) Structural and functional diversity among bacterial interspersed mosaic elements (BIMEs). Mol Microbiol 12: 61-70.
-
(1994)
Mol Microbiol
, vol.12
, pp. 61-70
-
-
Bachellier, S.1
Saurin, W.2
Perrin, D.3
Hofnung, M.4
Gilson, E.5
-
2
-
-
0000117110
-
Repeated sequences
-
Neidhardt, F.C., Curtis III, R., Ingraham, J.L., Lin, E.C.C., Brooks Low, K., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M., and Umbarger, H.E. (eds). Washington DC: American Society for Microbiology Press
-
Bachellier, S., Gilson, E., Hofnung, M., and Hill, C.W. (1996) Repeated sequences. In Escherichia coli and Salmonella typhimurium. Neidhardt, F.C., Curtis III, R., Ingraham, J.L., Lin, E.C.C., Brooks Low, K., Magasanik, B., Reznikoff, W.S., Riley, M., Schaechter, M., and Umbarger, H.E. (eds). Washington DC: American Society for Microbiology Press, pp. 2013-2040.
-
(1996)
Escherichia Coli and Salmonella Typhimurium
, pp. 2013-2040
-
-
Bachellier, S.1
Gilson, E.2
Hofnung, M.3
Hill, C.W.4
-
3
-
-
0021671752
-
The spacing of Escherichia coli DNA gyrase sites cleaved in vivo by treatment with oxolinic acid and sodium dodecyl sulfate
-
Béjar, S., and Bouché, J.P. (1984) The spacing of Escherichia coli DNA gyrase sites cleaved in vivo by treatment with oxolinic acid and sodium dodecyl sulfate. Biochimie 66: 693-700.
-
(1984)
Biochimie
, vol.66
, pp. 693-700
-
-
Béjar, S.1
Bouché, J.P.2
-
4
-
-
0027441932
-
Specific interaction of IHF with RIBs, a class of bacterial repetitive DNA elements located at the 3′-end of transcription units
-
Boccard, F., and Prentki, P. (1993) Specific interaction of IHF with RIBs, a class of bacterial repetitive DNA elements located at the 3′-end of transcription units. EMBO J 12: 5019-5027.
-
(1993)
EMBO J
, vol.12
, pp. 5019-5027
-
-
Boccard, F.1
Prentki, P.2
-
5
-
-
0025633561
-
Transcription regulates oxolinic acid-induced DNA gyrase cleavage at specific sites on the E. coli chromosome
-
Condemine, G., and Smith, C.L. (1990) Transcription regulates oxolinic acid-induced DNA gyrase cleavage at specific sites on the E. coli chromosome. Nucleic Acids Res 18: 7389-7396.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 7389-7396
-
-
Condemine, G.1
Smith, C.L.2
-
6
-
-
0029642089
-
In vivo interaction of the Escherichia coli integration host factor with its specific binding sites
-
Engelhorn, M., Boccard, F., Murtin, C., Prentki, P., and Geiselmann, J. (1995) In vivo interaction of the Escherichia coli integration host factor with its specific binding sites. Nucleic Acids Res 23: 2959-2965.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 2959-2965
-
-
Engelhorn, M.1
Boccard, F.2
Murtin, C.3
Prentki, P.4
Geiselmann, J.5
-
7
-
-
0024253624
-
Transcription induces gyration of the DNA template in Escherichia coli
-
Figueroa, N., and Bossi, L. (1988) Transcription induces gyration of the DNA template in Escherichia coli. Proc Natl Acad Sci USA 85: 9416-9420.
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 9416-9420
-
-
Figueroa, N.1
Bossi, L.2
-
8
-
-
0022729123
-
DNA gyrase complex with DNA: Determinants for site-specific DNA breakage
-
Fisher, L.M., Barot, H.A., and Cullen, M.E. (1986) DNA gyrase complex with DNA: determinants for site-specific DNA breakage. EMBO J 5: 1411-1418.
-
(1986)
EMBO J
, vol.5
, pp. 1411-1418
-
-
Fisher, L.M.1
Barot, H.A.2
Cullen, M.E.3
-
9
-
-
0024278509
-
DNA gyrase on the bacterial chromosome. Oxolinic acid-induced DNA cleavage in the dnaA-gyrB region
-
Franco, R.J., and Drlica, K. (1988) DNA gyrase on the bacterial chromosome. Oxolinic acid-induced DNA cleavage in the dnaA-gyrB region. J Mol Biol 201: 229-233.
-
(1988)
J Mol Biol
, vol.201
, pp. 229-233
-
-
Franco, R.J.1
Drlica, K.2
-
10
-
-
0024291348
-
Integration Host Factor: A protein for all reasons
-
Friedman, D.I. (1988) Integration Host Factor: a protein for all reasons. Cell 55: 545-554.
-
(1988)
Cell
, vol.55
, pp. 545-554
-
-
Friedman, D.I.1
-
11
-
-
0022618799
-
Replication of pSC101: Effects of mutations in the E. coli DNA binding protein IHF
-
Gamas, P., Burger, A.C., Churchward, G., Caro, L., Galas, D., and Chandler, M. (1986) Replication of pSC101: effects of mutations in the E. coli DNA binding protein IHF. Mol Gen Genet 204: 85-89.
-
(1986)
Mol Gen Genet
, vol.204
, pp. 85-89
-
-
Gamas, P.1
Burger, A.C.2
Churchward, G.3
Caro, L.4
Galas, D.5
Chandler, M.6
-
12
-
-
0001373485
-
Nalidixic acid resistance: A second genetic character involved in DNA gyrase activity
-
Gellert, M., Mizuuchi, K., O'Dea, M.H., Itoh, T., and Tomizawa, J.-I. (1977) Nalidixic acid resistance: a second genetic character involved in DNA gyrase activity. Proc Natl Acad Sci USA 74: 4772-4776.
-
(1977)
Proc Natl Acad Sci USA
, vol.74
, pp. 4772-4776
-
-
Gellert, M.1
Mizuuchi, K.2
O'Dea, M.H.3
Itoh, T.4
Tomizawa, J.-I.5
-
13
-
-
0025303243
-
DNA polymerase I and a protein complex bind specifically to E. coli palindromic unit highly repetitive DNA: Implications for bacterial chromosome organization
-
Gilson, E., Perrin, D., and Hofnung, M. (1990) DNA polymerase I and a protein complex bind specifically to E. coli palindromic unit highly repetitive DNA: implications for bacterial chromosome organization. Nucleic Acids Res 18: 3941-3952.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 3941-3952
-
-
Gilson, E.1
Perrin, D.2
Hofnung, M.3
-
14
-
-
0025728069
-
Palindromic units are part of a new bacterial interspersed mosaic element (BIME)
-
Gilson, E., Saurin, W., Perrin, D., Bachellier, S., and Hofnung, M. (1991) Palindromic units are part of a new bacterial interspersed mosaic element (BIME). Nucleic Acids Res 19: 1375-1383.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 1375-1383
-
-
Gilson, E.1
Saurin, W.2
Perrin, D.3
Bachellier, S.4
Hofnung, M.5
-
15
-
-
0029587675
-
Topoisomerase IV is a target of quinolones in Escherichia coli
-
Khodursky, A.B., Zechiedrich, E.L., and Cozzarelli, N.R. (1995) Topoisomerase IV is a target of quinolones in Escherichia coli. Proc Natl Acad Sci USA 92: 11801-11805.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 11801-11805
-
-
Khodursky, A.B.1
Zechiedrich, E.L.2
Cozzarelli, N.R.3
-
16
-
-
0022361531
-
Sites of reaction of Escherichia coli DNA gyrase on pBR322 in vivo as revealed by oxolinic acid-induced plasmid linearization
-
Lockshon, D., and Morris, D.R. (1985) Sites of reaction of Escherichia coli DNA gyrase on pBR322 in vivo as revealed by oxolinic acid-induced plasmid linearization. J Mol Biol 181: 63-74.
-
(1985)
J Mol Biol
, vol.181
, pp. 63-74
-
-
Lockshon, D.1
Morris, D.R.2
-
17
-
-
0023433855
-
Supercoiling of the DNA template during transcription
-
Liu, L.F., and Wang, J.C. (1987) Supercoiling of the DNA template during transcription. Proc Natl Acad Sci USA 84: 7024-7027.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 7024-7027
-
-
Liu, L.F.1
Wang, J.C.2
-
18
-
-
0025740223
-
mRNA degradation by processive 3′-5′ exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo
-
McLaren, R.S., Newbury, S.F., Dance, G.S.C., Causton, H.C., and Higgins, C.F. (1991) mRNA degradation by processive 3′-5′ exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo. J Mol Biol 221: 81-95.
-
(1991)
J Mol Biol
, vol.221
, pp. 81-95
-
-
McLaren, R.S.1
Newbury, S.F.2
Dance, G.S.C.3
Causton, H.C.4
Higgins, C.F.5
-
19
-
-
0025008740
-
The DNA gyrase of Escherichia coli participates in the formation of a spontaneous deletion by recA-independent recombination in vivo
-
Miura-Masuda, A., and Ikeda, H. (1990) The DNA gyrase of Escherichia coli participates in the formation of a spontaneous deletion by recA-independent recombination in vivo. Mol Gen Genet 220: 345-352.
-
(1990)
Mol Gen Genet
, vol.220
, pp. 345-352
-
-
Miura-Masuda, A.1
Ikeda, H.2
-
20
-
-
0018422012
-
Site-specific cleavage of DNA by E. coli DNA gyrase
-
Morrison, A., and Cozzarelli, N.R. (1979) Site-specific cleavage of DNA by E. coli DNA gyrase. Cell 17: 175-184.
-
(1979)
Cell
, vol.17
, pp. 175-184
-
-
Morrison, A.1
Cozzarelli, N.R.2
-
21
-
-
0019542484
-
Contacts between DNA gyrase and its binding site on DNA: Features of symmetry and asymmetry revealed by protection from nucleases
-
Morrison, A., and Cozzarelli, N.R. (1981) Contacts between DNA gyrase and its binding site on DNA: Features of symmetry and asymmetry revealed by protection from nucleases. Proc Natl Acad Sci USA 78: 7024-7027.
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, pp. 7024-7027
-
-
Morrison, A.1
Cozzarelli, N.R.2
-
22
-
-
0023667782
-
Stabilization of translationally active mRNA by prokaryotic REP sequences
-
Newbury, S.F., Smith, N.H., Robinson, E.G., Hiles, I.D., and Higgins, C.F. (1987) Stabilization of translationally active mRNA by prokaryotic REP sequences. Cell 48: 297-310.
-
(1987)
Cell
, vol.48
, pp. 297-310
-
-
Newbury, S.F.1
Smith, N.H.2
Robinson, E.G.3
Hiles, I.D.4
Higgins, C.F.5
-
23
-
-
0027426254
-
Integration host factor binds to a unique class of complex repetitive extragenic DNA sequences in Escherichia coli
-
Oppenheim, A.B., Rudd, K.E., Mendelsoon, I., and Teff, D. (1993) Integration host factor binds to a unique class of complex repetitive extragenic DNA sequences in Escherichia coli. Mol Microbiol 10: 113-122.
-
(1993)
Mol Microbiol
, vol.10
, pp. 113-122
-
-
Oppenheim, A.B.1
Rudd, K.E.2
Mendelsoon, I.3
Teff, D.4
-
24
-
-
0025517653
-
A DNA gyrase-binding site at the center of bacteriophage Mu genome is required for efficient replicative transposition
-
Pato, M.L., Howe, M.M., and Higgins, N.P. (1990) A DNA gyrase-binding site at the center of bacteriophage Mu genome is required for efficient replicative transposition. Proc Natl Acad Sci USA 87: 8716-8720.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 8716-8720
-
-
Pato, M.L.1
Howe, M.M.2
Higgins, N.P.3
-
25
-
-
0028842853
-
Characterization of Mu prophage lacking the central strong gyrase binding site: Localization of the block in replication
-
Pato, M.L, Karlok, M., Wall, C., and Higgins, N.P. (1995) Characterization of Mu prophage lacking the central strong gyrase binding site: localization of the block in replication. J Bacteriol 177: 5937-5942.
-
(1995)
J Bacteriol
, vol.177
, pp. 5937-5942
-
-
Pato, M.L.1
Karlok, M.2
Wall, C.3
Higgins, N.P.4
-
26
-
-
0029922992
-
A DEAD-box RNA helicase in the Escherichia coli RNA degradosome
-
Py, B., Higgins, C.F., Krisch, H.M., and Carpousis, A.J. (1996) A DEAD-box RNA helicase in the Escherichia coli RNA degradosome. Nature 381: 169-172.
-
(1996)
Nature
, vol.381
, pp. 169-172
-
-
Py, B.1
Higgins, C.F.2
Krisch, H.M.3
Carpousis, A.J.4
-
27
-
-
0026502006
-
Direct evidence for the effect of transcription on local DNA supercoiling in vivo
-
Rahmouni, A.R., and Wells, R.D. (1992) Direct evidence for the effect of transcription on local DNA supercoiling in vivo. J Mol Biol 223: 131-144.
-
(1992)
J Mol Biol
, vol.223
, pp. 131-144
-
-
Rahmouni, A.R.1
Wells, R.D.2
-
29
-
-
0004136246
-
-
Cold Spring Harbor, NY, Cold Spring Harbor Laboratory Press
-
Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989) Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY, Cold Spring Harbor Laboratory Press.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Edn.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
30
-
-
0024546107
-
Mechanism of inhibition of DNA gyrase by quinolone antibacterials: A cooperative drug-DNA binding model
-
Shen, L.L., Mitscher, L.A., Sharma, P.N., O'Donnell, T.J., Chu, D.W.T., Cooper, C.S., Rosen, T., and Pernet, A.G. (1989) Mechanism of inhibition of DNA gyrase by quinolone antibacterials: a cooperative drug-DNA binding model. Biochemistry 28: 3886-3894.
-
(1989)
Biochemistry
, vol.28
, pp. 3886-3894
-
-
Shen, L.L.1
Mitscher, L.A.2
Sharma, P.N.3
O'Donnell, T.J.4
Chu, D.W.T.5
Cooper, C.S.6
Rosen, T.7
Pernet, A.G.8
-
31
-
-
0025020281
-
Tandem chromosomal duplications: Role of REP sequences in the recombination event at the join-point
-
Shyamala, V., Schneider, E., and Ames, G.F. (1990) Tandem chromosomal duplications: role of REP sequences in the recombination event at the join-point. EMBO J 9: 939-946.
-
(1990)
EMBO J
, vol.9
, pp. 939-946
-
-
Shyamala, V.1
Schneider, E.2
Ames, G.F.3
-
32
-
-
0018384079
-
DNA gyrase on the bacterial chromosome: DNA cleavage induced by oxolinic acid
-
Snyder, M., and Drlica, K. (1979) DNA gyrase on the bacterial chromosome: DNA cleavage induced by oxolinic acid. J Mol Biol 131: 287-302.
-
(1979)
J Mol Biol
, vol.131
, pp. 287-302
-
-
Snyder, M.1
Drlica, K.2
-
33
-
-
0001534829
-
Mechanism of action of Nalidixic acid: Purification of Escherichia coli nalA gene product and its relationship to DNA gyrase and a novel nicking-closing enzyme
-
Sugino, A., Peebles, C.L., Kreuzer, K.N., and Cozzarelli, N.R. (1977) Mechanism of action of Nalidixic acid: purification of Escherichia coli nalA gene product and its relationship to DNA gyrase and a novel nicking-closing enzyme. Proc Natl Acad Sci USA 74: 4767-4771.
-
(1977)
Proc Natl Acad Sci USA
, vol.74
, pp. 4767-4771
-
-
Sugino, A.1
Peebles, C.L.2
Kreuzer, K.N.3
Cozzarelli, N.R.4
-
34
-
-
0024022068
-
The partition locus of plasmid pSC101 is a specific binding site for DNA gyrase
-
Wahle, E., and Kornberg, A. (1988) The partition locus of plasmid pSC101 is a specific binding site for DNA gyrase. EMBO J 7: 1889-1895.
-
(1988)
EMBO J
, vol.7
, pp. 1889-1895
-
-
Wahle, E.1
Kornberg, A.2
-
35
-
-
0004754609
-
DNA gyrase binds to the family of prokaryotic repetitive extragenic palindromic sequences
-
Yang, Y., and Ames, G.F.-L. (1988) DNA gyrase binds to the family of prokaryotic repetitive extragenic palindromic sequences. Proc Natl Acad Sci USA 85: 8850-8854.
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 8850-8854
-
-
Yang, Y.1
Ames, G.F.-L.2
-
36
-
-
0002023387
-
The family of repetitive extragenic palindromic sequences: Interaction with DNA gyrase and histone-like protein HU
-
Drlica, K., and Riley, M. (eds). Washington, DC, American Society for Microbiology
-
Yang, Y., and Ames, G.F.-L. (1990) The family of repetitive extragenic palindromic sequences: interaction with DNA gyrase and histone-like protein HU. In The Bacterial Chromosome. Drlica, K., and Riley, M. (eds). Washington, DC, American Society for Microbiology, pp. 211-225.
-
(1990)
The Bacterial Chromosome
, pp. 211-225
-
-
Yang, Y.1
Ames, G.F.-L.2
-
37
-
-
0028858007
-
Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli
-
Zechiedrich, E.L., and Cozzarelli, N.R. (1995) Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli. Genes Dev 9: 2859: 2869.
-
(1995)
Genes Dev
, vol.9
, pp. 2859
-
-
Zechiedrich, E.L.1
Cozzarelli, N.R.2
|