-
1
-
-
0028043495
-
Dissociation of RecA filaments from duplex DNA by the RuvA and RuvB DNA repair proteins
-
Adams, D. E., I. R. Tsaneva, and S. C. West. 1994. Dissociation of RecA filaments from duplex DNA by the RuvA and RuvB DNA repair proteins. Proc. Natl. Acad. Sci. USA 91:9901-9905.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 9901-9905
-
-
Adams, D.E.1
Tsaneva, I.R.2
West, S.C.3
-
2
-
-
0028869149
-
Relaxing and unwinding on Holliday: DNA helicase-mediated branch migration
-
Adams, D. E., and S. C. West. 1995. Relaxing and unwinding on Holliday: DNA helicase-mediated branch migration. Mutat. Res. 337:149-159.
-
(1995)
Mutat. Res.
, vol.337
, pp. 149-159
-
-
Adams, D.E.1
West, S.C.2
-
3
-
-
0024573304
-
Use of selectively trypsinized nucleosome core particles to analyze the role of the histone "tails" in the stabilization of the nucleosome
-
Ausio, J., F. Dong, and K. E. van Holde. 1989. Use of selectively trypsinized nucleosome core particles to analyze the role of the histone "tails" in the stabilization of the nucleosome. J. Mol. Biol. 206:451-463.
-
(1989)
J. Mol. Biol.
, vol.206
, pp. 451-463
-
-
Ausio, J.1
Dong, F.2
Van Holde, K.E.3
-
4
-
-
0016791207
-
Cleavage of DNA in nuclei and chromatin with staphylococcal nuclease
-
Axel, R. 1975. Cleavage of DNA in nuclei and chromatin with staphylococcal nuclease. Biochemistry 15:2921-2925.
-
(1975)
Biochemistry
, vol.15
, pp. 2921-2925
-
-
Axel, R.1
-
5
-
-
0025287114
-
Interleukin 4 induces changes in the chromatin structure of the γ1 switch region in resting B cells before switch recombination
-
Berton, M. T., and E. S. Vitetta. 1990. Interleukin 4 induces changes in the chromatin structure of the γ1 switch region in resting B cells before switch recombination. J. Exp. Med. 172:375-378.
-
(1990)
J. Exp. Med.
, vol.172
, pp. 375-378
-
-
Berton, M.T.1
Vitetta, E.S.2
-
6
-
-
85036674658
-
-
Unpublished results
-
5a. Biswas, I., and P. Hsieh. Unpublished results.
-
-
-
Biswas, I.1
Hsieh, P.2
-
7
-
-
0029174547
-
Homologous recombination proteins in prokaryotes and eukaryotes
-
Camerini-Otero, R. D., and P. Hsieh. 1995. Homologous recombination proteins in prokaryotes and eukaryotes. Annu. Rev. Genet. 29:509-552.
-
(1995)
Annu. Rev. Genet.
, vol.29
, pp. 509-552
-
-
Camerini-Otero, R.D.1
Hsieh, P.2
-
8
-
-
0017133394
-
The organization of histones and DNA in chromatin: Evidence for an arginine-rich histone kernel
-
Camerini-Otero, R. D., B. Sollner-Webb, and G. Felsenfeld. 1976. The organization of histones and DNA in chromatin: evidence for an arginine-rich histone kernel. Cell 8:333-347.
-
(1976)
Cell
, vol.8
, pp. 333-347
-
-
Camerini-Otero, R.D.1
Sollner-Webb, B.2
Felsenfeld, G.3
-
9
-
-
0024357459
-
Transcriptional activator nuclear factor I stimulates the replication of SV40 minichromosomes in vivo and in vitro
-
Cheng, L., and T. J. Kelly. 1989. Transcriptional activator nuclear factor I stimulates the replication of SV40 minichromosomes in vivo and in vitro. Cell 59:541-551.
-
(1989)
Cell
, vol.59
, pp. 541-551
-
-
Cheng, L.1
Kelly, T.J.2
-
10
-
-
0026512274
-
Regulation of DNA replication in vitro by the transcriptional activation domain of GAL4-VP16
-
Cheng, L., J. L. Workman, R. E. Kingston, and T. J. Kelly. 1992. Regulation of DNA replication in vitro by the transcriptional activation domain of GAL4-VP16. Proc. Natl. Acad. Sci. USA 89:589-593.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 589-593
-
-
Cheng, L.1
Workman, J.L.2
Kingston, R.E.3
Kelly, T.J.4
-
11
-
-
0026733468
-
A nucleosome core is transferred out of the path of a transcribing polymerase
-
Clark, D. J., and G. Felsenfeld. 1992. A nucleosome core is transferred out of the path of a transcribing polymerase. Cell 71:11-22.
-
(1992)
Cell
, vol.71
, pp. 11-22
-
-
Clark, D.J.1
Felsenfeld, G.2
-
12
-
-
0023125672
-
Gene 3 endonuclease of bacteriophage T7 resolves conformationally branched structures in double-stranded DNA
-
de Massey, B., R. A. Weisberg, and F. W. Studier. 1987. Gene 3 endonuclease of bacteriophage T7 resolves conformationally branched structures in double-stranded DNA. J. Mol. Biol. 193:359-376.
-
(1987)
J. Mol. Biol.
, vol.193
, pp. 359-376
-
-
De Massey, B.1
Weisberg, R.A.2
Studier, F.W.3
-
13
-
-
0023665172
-
The site-specific cleavage of synthetic Holliday junction analogs and related branched DNA structures by bacteriophage T7 endonuclease I
-
Dickie, P., G. McFadden, and A. R. Morgan. 1987. The site-specific cleavage of synthetic Holliday junction analogs and related branched DNA structures by bacteriophage T7 endonuclease I. J. Biol. Chem. 262:14826-14836.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 14826-14836
-
-
Dickie, P.1
McFadden, G.2
Morgan, A.R.3
-
14
-
-
0022230224
-
DNA bending and its relation to nucleosome positioning
-
Drew, H. R., and A. A. Travers. 1985. DNA bending and its relation to nucleosome positioning. J. Mol. Biol. 186:773-790.
-
(1985)
J. Mol. Biol.
, vol.186
, pp. 773-790
-
-
Drew, H.R.1
Travers, A.A.2
-
15
-
-
0024280885
-
The structure of the Holliday junction, and its resolution
-
Duckett, D. R., A. I. Murchie, S. Diekmann, E. von Kitzing, B. Kemper, and D. M. J. Lilley. 1988. The structure of the Holliday junction, and its resolution. Cell 55:79-89.
-
(1988)
Cell
, vol.55
, pp. 79-89
-
-
Duckett, D.R.1
Murchie, A.I.2
Diekmann, S.3
Von Kitzing, E.4
Kemper, B.5
Lilley, D.M.J.6
-
16
-
-
0029157378
-
Evolution of the SNF2 family of proteins: Subfamilies with distinct sequences and functions
-
Eisen, J. A., K. S. Sweder, and P. C. Hanawalt. 1995. Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions. Nucleic Acids Res. 23:2715-2723.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2715-2723
-
-
Eisen, J.A.1
Sweder, K.S.2
Hanawalt, P.C.3
-
17
-
-
0029862606
-
Relationship between nuclease-hypersensitive sites and meiotic recombination hot spot activity at the HIS4 locus of Saccharomyces cerevisiae
-
Fan, Q.-Q., and T. D. Petes. 1996. Relationship between nuclease-hypersensitive sites and meiotic recombination hot spot activity at the HIS4 locus of Saccharomyces cerevisiae. Mol. Cell. Biol. 16:2037-2043.
-
(1996)
Mol. Cell. Biol.
, vol.16
, pp. 2037-2043
-
-
Fan, Q.-Q.1
Petes, T.D.2
-
18
-
-
0030581149
-
Chromatin unfolds
-
Felsenfeld, G. 1996. Chromatin unfolds. Cell 86:13-19.
-
(1996)
Cell
, vol.86
, pp. 13-19
-
-
Felsenfeld, G.1
-
20
-
-
0023430457
-
Isolation and characterization of intermediates in site-specific recombination
-
Hoess, R. H., A. Wiezbicki, and K. Abremski. 1987. Isolation and characterization of intermediates in site-specific recombination. Proc. Natl. Acad. Sci. USA 84:6840-6844.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 6840-6844
-
-
Hoess, R.H.1
Wiezbicki, A.2
Abremski, K.3
-
22
-
-
0023700277
-
Holliday junctions in FLP recombination: Resolution by step-arrest mutants of FLP protein
-
Jayaram, M., K. L. Crain, R. L. Parsons, and R. M. Harshey. 1988. Holliday junctions in FLP recombination: resolution by step-arrest mutants of FLP protein. Proc. Natl. Acad. Sci. USA 85:7902-7906.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 7902-7906
-
-
Jayaram, M.1
Crain, K.L.2
Parsons, R.L.3
Harshey, R.M.4
-
23
-
-
0029094283
-
Chemical probe and missing nucleoside analysis of Flp recombinase bound to the recombination target sequence
-
Kimball, A., M. L. Kimball, M. Jayaram, and T. D. Tullius. 1995. Chemical probe and missing nucleoside analysis of Flp recombinase bound to the recombination target sequence. Nucleic Acids Res. 23:3009-3017.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 3009-3017
-
-
Kimball, A.1
Kimball, M.L.2
Jayaram, M.3
Tullius, T.D.4
-
24
-
-
0029917840
-
Repression and activation by multiprotein complexes that alter chromatin structure
-
Kingston, R. E., C. A. Bunker, and A. N. Imbalzano. 1996. Repression and activation by multiprotein complexes that alter chromatin structure. Genes Dev. 10:905-920.
-
(1996)
Genes Dev.
, vol.10
, pp. 905-920
-
-
Kingston, R.E.1
Bunker, C.A.2
Imbalzano, A.N.3
-
25
-
-
0023179984
-
Homology-dependent interactions in phage lambda site-specific recombination
-
Kitts, P. A., and H. A. Nash. 1987. Homology-dependent interactions in phage lambda site-specific recombination. Nature 329:346-348.
-
(1987)
Nature
, vol.329
, pp. 346-348
-
-
Kitts, P.A.1
Nash, H.A.2
-
26
-
-
0029063189
-
Interplay between chromatin structure and transcription
-
Kornberg, R. D., and Y. Lorch. 1995. Interplay between chromatin structure and transcription. Curr. Opin. Cell Biol. 7:371-375.
-
(1995)
Curr. Opin. Cell Biol.
, vol.7
, pp. 371-375
-
-
Kornberg, R.D.1
Lorch, Y.2
-
27
-
-
0028308710
-
Homologous pairing and DNA strand-exchange proteins
-
Kowalczykowski, S. C., and A. K. Eggleston. 1994. Homologous pairing and DNA strand-exchange proteins. Annu. Rev. Biochem. 63:991-1043.
-
(1994)
Annu. Rev. Biochem.
, vol.63
, pp. 991-1043
-
-
Kowalczykowski, S.C.1
Eggleston, A.K.2
-
29
-
-
0026642219
-
Mobile nucleosomes - A general behavior
-
Meersseman, G., S. Pennings, and E. M. Bradbury. 1992. Mobile nucleosomes - a general behavior. EMBO J. 11:2951-2959.
-
(1992)
EMBO J.
, vol.11
, pp. 2951-2959
-
-
Meersseman, G.1
Pennings, S.2
Bradbury, E.M.3
-
30
-
-
0025999296
-
Sequence and expression of GLN3, a positive nitrogen regulatory gene of Saccharomyces cerevisiae encoding a protein with a putative zinc finger DNA-binding domain
-
Minehart, P. L., and B. Magasanik. 1991. Sequence and expression of GLN3, a positive nitrogen regulatory gene of Saccharomyces cerevisiae encoding a protein with a putative zinc finger DNA-binding domain. Mol. Cell. Biol. 11:6216-6228.
-
(1991)
Mol. Cell. Biol.
, vol.11
, pp. 6216-6228
-
-
Minehart, P.L.1
Magasanik, B.2
-
31
-
-
0024438911
-
Nucleosomes inhibit both transcriptional initiation and elongation by RNA polymerase III in vitro
-
Morse, R. H. 1989. Nucleosomes inhibit both transcriptional initiation and elongation by RNA polymerase III in vitro. EMBO J. 8:2343-2351.
-
(1989)
EMBO J.
, vol.8
, pp. 2343-2351
-
-
Morse, R.H.1
-
32
-
-
0020181398
-
The regulation of yeast mating-type chromatin structure by SIR: An action at a distance affecting both transcription and transposition
-
Nasmyth, K. A. 1982. The regulation of yeast mating-type chromatin structure by SIR: an action at a distance affecting both transcription and transposition. Cell 30:567-578.
-
(1982)
Cell
, vol.30
, pp. 567-578
-
-
Nasmyth, K.A.1
-
33
-
-
0024444126
-
Analysis of nucleosome positioning by in vitro reconstitution
-
Neubauer, B., and W. Hörz. 1989. Analysis of nucleosome positioning by in vitro reconstitution. Methods Enzymol. 170:630-644.
-
(1989)
Methods Enzymol.
, vol.170
, pp. 630-644
-
-
Neubauer, B.1
Hörz, W.2
-
34
-
-
0023667024
-
Site-specific recombination intermediates trapped with suicide substrates
-
Nünes-Duby, S. E., L. Matsumoto, and A. Landy. 1987. Site-specific recombination intermediates trapped with suicide substrates. Cell 50:779-788.
-
(1987)
Cell
, vol.50
, pp. 779-788
-
-
Nünes-Duby, S.E.1
Matsumoto, L.2
Landy, A.3
-
35
-
-
0027938045
-
Changes in chromatin structure at recombination initiation sites during yeast meiosis
-
Ohta, K., T. Shibata, and A. Nicolas. 1994. Changes in chromatin structure at recombination initiation sites during yeast meiosis. EMBO J. 13:5754-5763.
-
(1994)
EMBO J.
, vol.13
, pp. 5754-5763
-
-
Ohta, K.1
Shibata, T.2
Nicolas, A.3
-
36
-
-
0029019745
-
A pivotal role for the structure of the Holliday junction in DNA branch migration
-
Panyutin, I. G., I. Biswas, and P. Hsieh. 1995. A pivotal role for the structure of the Holliday junction in DNA branch migration. EMBO J 14:1819-1826.
-
(1995)
EMBO J
, vol.14
, pp. 1819-1826
-
-
Panyutin, I.G.1
Biswas, I.2
Hsieh, P.3
-
37
-
-
0027200006
-
Formation of a single base mismatch impedes spontaneous DNA branch migration
-
Panyutin, I. G., and P. Hsieh. 1993. Formation of a single base mismatch impedes spontaneous DNA branch migration. J. Mol. Biol. 230:413-424.
-
(1993)
J. Mol. Biol.
, vol.230
, pp. 413-424
-
-
Panyutin, I.G.1
Hsieh, P.2
-
38
-
-
0028343925
-
The kinetics of spontaneous DNA branch migration
-
Panyutin, I. G., and P. Hsieh. 1994. The kinetics of spontaneous DNA branch migration. Proc. Natl. Acad. Sci. USA 91:2021-2025.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 2021-2025
-
-
Panyutin, I.G.1
Hsieh, P.2
-
39
-
-
0028968305
-
Structure of a multisubunit complex that promotes DNA branch migration
-
Parsons, C. A., A. Stasiak, R. J. Bennett, and S. C. West. 1995. Structure of a multisubunit complex that promotes DNA branch migration. Nature 374: 375-378.
-
(1995)
Nature
, vol.374
, pp. 375-378
-
-
Parsons, C.A.1
Stasiak, A.2
Bennett, R.J.3
West, S.C.4
-
40
-
-
0025267106
-
Cleavage specificity of bacteriophage T4 endonuclease VII and bacteriophage T7 endonuclease I on synthetic branch migratable Holliday junctions
-
Picksley, S. M., C. A. Parsons, B. Kemper, and S. C. West. 1990. Cleavage specificity of bacteriophage T4 endonuclease VII and bacteriophage T7 endonuclease I on synthetic branch migratable Holliday junctions. J. Mol. Biol. 212:723-735.
-
(1990)
J. Mol. Biol.
, vol.212
, pp. 723-735
-
-
Picksley, S.M.1
Parsons, C.A.2
Kemper, B.3
West, S.C.4
-
41
-
-
0021101211
-
Periodicity of exonuclease III digestion of chromatin and the pitch of deoxyribonucleic acid on the nucleosome
-
Prunell, A. 1983. Periodicity of exonuclease III digestion of chromatin and the pitch of deoxyribonucleic acid on the nucleosome. Biochemistry 22:4887-4894.
-
(1983)
Biochemistry
, vol.22
, pp. 4887-4894
-
-
Prunell, A.1
-
42
-
-
0026030274
-
Nucleosomes on linear duplex DNA allow homologous pairing but prevent strand exchange promoted by RecA protein
-
Ramdas, J., E. Mythili, and K. Muniyappa. 1991. Nucleosomes on linear duplex DNA allow homologous pairing but prevent strand exchange promoted by RecA protein. Proc. Natl. Acad. Sci. USA 88:1344-1348.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 1344-1348
-
-
Ramdas, J.1
Mythili, E.2
Muniyappa, K.3
-
43
-
-
0022500637
-
Deletion analysis of a DNA sequence that positions itself precisely on the nucleosome core
-
Ramsay, N. 1986. Deletion analysis of a DNA sequence that positions itself precisely on the nucleosome core. J. Mol. Biol. 189:179-188.
-
(1986)
J. Mol. Biol.
, vol.189
, pp. 179-188
-
-
Ramsay, N.1
-
44
-
-
0024431827
-
Assembly of nucleosomes and chromatin in vitro
-
Rhodes, D., and R. A. Laskey. 1989. Assembly of nucleosomes and chromatin in vitro. Methods Enzymol. 170:575-585.
-
(1989)
Methods Enzymol.
, vol.170
, pp. 575-585
-
-
Rhodes, D.1
Laskey, R.A.2
-
45
-
-
0018816003
-
Exonuclease III of Escherichia coli K-12, an AP endonuclease
-
Rogers, S. G., and B. Weiss. 1980. Exonuclease III of Escherichia coli K-12, an AP endonuclease. Methods Enzymol. 65:201-211.
-
(1980)
Methods Enzymol.
, vol.65
, pp. 201-211
-
-
Rogers, S.G.1
Weiss, B.2
-
46
-
-
0028972024
-
Identification of double Holliday junctions as intermediates in meiotic recombination
-
Schwacha, A., and N. Kleckner. 1995. Identification of double Holliday junctions as intermediates in meiotic recombination. Cell 83:783-791.
-
(1995)
Cell
, vol.83
, pp. 783-791
-
-
Schwacha, A.1
Kleckner, N.2
-
47
-
-
0026011623
-
DNase I-hypersensitive sites and transcription factor-binding motifs within the mouse Eβ meiotic recombination hot spot
-
Shenkar, R., M. Shen, and N. Arnheim. 1991. DNase I-hypersensitive sites and transcription factor-binding motifs within the mouse Eβ meiotic recombination hot spot. Mol. Cell. Biol. 11:1813-1819.
-
(1991)
Mol. Cell. Biol.
, vol.11
, pp. 1813-1819
-
-
Shenkar, R.1
Shen, M.2
Arnheim, N.3
-
49
-
-
0025144957
-
Effects of DNA sequences and histone-histone interactions on nucleosome placement
-
Shrader, T. E., and D. M. Crothers. 1990. Effects of DNA sequences and histone-histone interactions on nucleosome placement. J. Mol. Biol. 216:69-84.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 69-84
-
-
Shrader, T.E.1
Crothers, D.M.2
-
50
-
-
0018435056
-
A new procedure for purifying histone pairs H2A + H2B and H3 + H4 from chromatin using hydroxylapatite
-
Simon, R. H., and G. Felsenfeld. 1979. A new procedure for purifying histone pairs H2A + H2B and H3 + H4 from chromatin using hydroxylapatite. Nucleic Acids Res. 6:689-696.
-
(1979)
Nucleic Acids Res.
, vol.6
, pp. 689-696
-
-
Simon, R.H.1
Felsenfeld, G.2
-
51
-
-
0025067370
-
Nucleosome positioning can affect the function of a cis-acting DNA element in vivo
-
Simpson, R. G. 1990. Nucleosome positioning can affect the function of a cis-acting DNA element in vivo. Nature 343:387-389.
-
(1990)
Nature
, vol.343
, pp. 387-389
-
-
Simpson, R.G.1
-
52
-
-
0018534827
-
Rearrangement of chromatin structure induced by increasing ionic strength and temperature
-
Spadafora, C., P. Oudet, and P. Chambon. 1979. Rearrangement of chromatin structure induced by increasing ionic strength and temperature. Eur. J. Biochem. 100:225-235.
-
(1979)
Eur. J. Biochem.
, vol.100
, pp. 225-235
-
-
Spadafora, C.1
Oudet, P.2
Chambon, P.3
-
53
-
-
0028125847
-
A histone octamer can step around a transcribing polymerase without leaving the template
-
Studitsky, V. M., D. J. Clark, and G. Felsenfeld. 1994. A histone octamer can step around a transcribing polymerase without leaving the template. Cell 76:371-382.
-
(1994)
Cell
, vol.76
, pp. 371-382
-
-
Studitsky, V.M.1
Clark, D.J.2
Felsenfeld, G.3
-
54
-
-
0028909134
-
DNA structure-dependent requirements for yeast RAD genes in gene conversion
-
Sugawara, N., E. L. Ivanov, J. Fishman-Lobell, B. L. Ray, X. Wu, and J. E. Haber. 1995. DNA structure-dependent requirements for yeast RAD genes in gene conversion. Nature 373:84-86.
-
(1995)
Nature
, vol.373
, pp. 84-86
-
-
Sugawara, N.1
Ivanov, E.L.2
Fishman-Lobell, J.3
Ray, B.L.4
Wu, X.5
Haber, J.E.6
-
55
-
-
0024443979
-
Chemical cross-linking of histones
-
Thomas, J. O. 1989. Chemical cross-linking of histones. Methods Enzymol. 170:549-571.
-
(1989)
Methods Enzymol.
, vol.170
, pp. 549-571
-
-
Thomas, J.O.1
-
56
-
-
0026713778
-
What happens to nucleosomes during transcription?
-
van Holde, K. E., D. E. Lohr, and C. Robert. 1992. What happens to nucleosomes during transcription? J. Biol. Chem. 267:2837-2840.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 2837-2840
-
-
Van Holde, K.E.1
Lohr, D.E.2
Robert, C.3
-
57
-
-
0028178787
-
The processing of recombination intermediates: Mechanistic insights from studies of bacterial proteins
-
West, S. C. 1994. The processing of recombination intermediates: mechanistic insights from studies of bacterial proteins. Cell 76:9-15.
-
(1994)
Cell
, vol.76
, pp. 9-15
-
-
West, S.C.1
-
58
-
-
85036679026
-
Transcription factor TFIIC can regulate differential Xenopus 5S RNA transcription in vitro
-
Wolffe, A. 1987. Transcription factor TFIIC can regulate differential Xenopus 5S RNA transcription in vitro. EMBO J. 7:1071-1079.
-
(1987)
EMBO J.
, vol.7
, pp. 1071-1079
-
-
Wolffe, A.1
-
59
-
-
0028236523
-
Transcription: In tune with the histones
-
Wolffe, A. P. 1994. Transcription: in tune with the histones. Cell 77:13-16.
-
(1994)
Cell
, vol.77
, pp. 13-16
-
-
Wolffe, A.P.1
-
60
-
-
0028206864
-
Meiosis-induced double-strand break sites determined by yeast chromatin structure
-
Wu, T.-C., and M. Lichten. 1994. Meiosis-induced double-strand break sites determined by yeast chromatin structure. Science 263:515-518.
-
(1994)
Science
, vol.263
, pp. 515-518
-
-
Wu, T.-C.1
Lichten, M.2
|