A sequence-ready physical map of a region of 12q24.1

Genomics

Volumn 45, Issue 2, 1997, Pages 271-278

  Renault, B ^a   Hovnanian, A ^a   Bryce, S ^a   Chang, J J ^a   Lau, S ^a   Sakuntabhai, A ^a   Monk, S ^a   Carter, S ^a   Ross, C J D ^a   Pang, J ^a   Twells, R ^a   Chamberlain, S ^a   Monaco, A P ^a   Strachan, T ^a   Kucherlapati, R ^a  

^a ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG;

ARTICLE; CHROMOSOME 12Q; CHROMOSOME MAP; DARIER DISEASE; HUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE TAGGED SITE;

BACTERIA (MICROORGANISMS);

EID: 0030694706     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1997.4888     Document Type: Article

References (39)

1. C.J. Bell M.L. Budarf B.W. Nieuwenhuijsen B.L. Barnoski K.H. Buetow K. Campbell A.M.E. Colbert J. Collins M. Daly P.R. Desjardins T. DeZwaan B. Eckman S. Foote K. Hart K. Hiester M.J. Van Het Hoog E. Hopper A. Kaufman H.E. McDermid G.C. Overton M.P. Reeve D.B. Searls L. Stein V.H. Valmiki E. Watson S. Williams R. Winston R.L. Nussbaum E.S. Lander K.H. Fischbeck B.S. Emanuel T.J. Hudson Integration of physical, breakpoint and genetic maps of chromosome 22: Localization of 587 yeast artificial chromosomes with 238 mapped markers Hum. Mol. Genet. 4 1995 59 69
2. C. Bellanne-Chantelot B. Lacroix P. Ougen A. Billault S. Beaufils S. Bertrand I. Georges R. Glibert I. Gros G. Lucotte L. Susini J.-J. Codani P. Gesnouin S. Pook G. Vaysseix J. Lu-Kuo T. Reid D. Ward I. Chumakov D. LePaslier E. Barillot D. Cohen Mapping the whole human genome by fingerprinting yeast artificial chromosomes Cell 70 1992 1059 1068
3. A.V. Carrano P.J. deJong E. Branscomb T. Slezak B.W. Watkins Constructing chromosome- and region-specific cosmid maps of the human genome Genome 31 1989 1059 1065
4. S.A. Carter S.D. Bryce C.S. Munro E. Healy R. Bashir J. Weissenbach J. LeBlanc-Straceski R. Kucherlapati A. Stephenson J.L. Rees T. Strachan Linkage analyses in British pedigrees suggest a single locus for Darier disease and narrow the location to the interval between D12S105 and D12S129 Genomics 24 1994 378 382
5. I. Chumakov P. Rigault S. Guillou P. Ougen A. Billaut G. Guasconi P. Gervy I. LeGall P. Soularue L. Grinas L. Bougueleret G. Bellane-Chantelot B. LaCroix E. Barillot P. Gesnouin S. Pook G. Vaysseix G. Frelat A. Schmitz J.-L. Sambucy A. Bosch X. Estivill J. Weissenbach A. Vignal H. Riethman D. Cox D. Patterson K. Gardiner M. Hattori Y. Sakaki H. Ichikawa M. Ohki D. LePaslier R. Heilig S. Antonarakis D. Cohen Continuum of ovlerapping clones spanning the entire human chromosome 21q Nature 359 1992 380 387
6. I.M. Chumakov I. LeGall A. Billault P. Ougen P. Soularue S. Guillou P. Rigault H. Bui M.F. De Tand E. Barillot H. Abderrahim D. Cherif R. Berger D. LePaslier D. Cohen Isolation of chromosome 21-specific yeast artificial chromosomes from a total human genome library Nature Genet. 1 1992 222 225
7. I.M. Chumakov P. Rigault I. Le Gall C. Bellanné-Chantelot A. Billault S. Guillou P. Soularue G. Guasconi E. Poullier I. Gros M. Belova J.-L. Sambucy L. Susini P. Gervy F. Gilbert S. Beaufils H. Bul C. Massart M.-F. De Tand F. Dukasz S. Lecoulant P. Ougen V. Perrot M. Saumier C. Soravito R. Bahouaylla A. Cohen-Akenine E. Barillot S. Bertrand J.-J. Codani D. Caterina I. Georges B. Lacroix G. Lucotte M. Sahbatou C. Schmit M. Sangouard E. Tubacher C. Dib S. Fauré C. Fizames G. Gyapay P. Millasseau S. Nguyen D. Muselet A. Vignal J. Morissette J. Menninger J. Lieman T. Desai A. Banks P. Bray-Ward D. Ward T. Hudson S. Gerety S. Foote L. Stein D.C. Page E.S. Lander J. Weissenbach D. LePaslier D. Cohen A YAC contig map of the human genome Nature 377 1995 175 297
8. D. Cohen I. Chumakov J. Weissenbach A first generation physical map of the human genome Nature 366 1993 698 701
9. F. Collins D. Galas A new five year plan for the U.S. Human Genome Project Science 262 1993 43 46
10. J.E. Collins C.G. Cole L.J. Smink C.L. Garrett M.A. Leversha C.A. Soderlund G.L. Maslen L.A. Everett K.M. Rice A.J. Coffey S. Gregory R. Gwilliam A. Dunham A.F. Davies S. Hassock C.M. Todd H. Lehrach T.J.M. Hulsebos J. Weissenbach B. Morrow R.S. Kucherlapati R. Wadey P.J. Scambler U.-J. Kim M.I. Simon N.P. Carter R. Durbin J.P. Dumanski D.R. Bentley I. Dunham A high density YAC contig map of human chromosome 22 Nature 377 1995 367 371
11. D.R. Cox M. Burmeister E.R. Price S. Kim R.M. Myers Radiation hybrid mapping: A somatic cell genetic method for constructing high-resolution maps of mammalian chromosomes Science 250 1990 245 250
12. C. Dib S. Faure C. Fizames D. Samson N. Drouot A. Vignal P. Millasseau S. Marc J. Hazan E. Seboun M. Lathrop G. Gyapay J. Morisette J. Weissenbach A comprehensive genetic map of the human genome based on 5,264 microsatellites Nature 380 1996 A1 A128
13. N.A. Doggett L.A. Goodwin J.G. Tesmer L.J. Meincke D.C. Bruce L.M. Clark M.R. Altherr A.A. Ford H.-C. Chi B.L. Marrone J.L. Longmire S.A. Lane S.A. Whitmore M.G. Lowenstein R.D. Sutherland M.O. Mundt E.H. Knill W.J. Bruno C.A. Macken D.C. Torney J.-R. Wu J. Griffith G.R. Sutherland L.L. Deaven D.F. Callen R.K. Moyzis An integrated physical map of human chromosome 16 Nature 377 1995 335 366
14. B. Dujon D. Alexandraki B. André W. Ansorge V. Baladron Complete DNA sequence of yeast chromosome XI Nature 369 1994 371 378
15. S. Foote D. Vollrath A. Hilton D.C. Page The human Y chromosome: Overlapping DNA clones spanning the euchromatic region Science 258 1992 60 66
16. R.M. Gemmill I. Chumakov P. Scott B. Waggoner P. Rigault J. Cypser Q. Chen J. Weissenbach K. Gardiner H. Wang Y. Pekarsky I. Le Gall D. Le Paslier S. Guillou E. Li L. Robinson L. Hahner S. Todd D. Cohen H.A. Drabkin A second generation YAC contig map of human chromosome 3 Nature 377 1995 299 320
17. A. Goffeau B.G. Barrell H. Bussey R.W. Davis B. Dujon H. Feldmann F. Galibert J.D. Hoheisel C. Jacq M. Johnston E.J. Louis H.W. Mewes Y. Murakami P. Philippsen H. Tettelin S.G. Oliver Life with 6000 genes Science 274 1996 563 567
18. E.D. Green M.V. Olson Chromosomal region of the cystic fibrosis gene in yeast artificial chromosomes: A model for human genome mapping Science 250 1990 94 98
19. G. Gyapay J. Morrissette A. Vignal C. Dib C. Fizames P. Millasseau S. Marc G. Bernardi M. Lathrop J. Weissenbach The 1993–94 Genethon human genetic linkage map Nature Genet. 7 1994 246 339
20. J. Hodgkin R.H.A. Plasterk R.H. Waterston The nematode Caenorhabditis elegans Science 270 1995 410 414
21. T.J. Hudson L.D. Stein S.S. Gerety J. Ma A.B. Castle J. Silva D.K. Slonim R. Baptista L. Kruglyak S.-H. Xu X. Hu A.M.E. Colbert C. Rosenberg M.P. Reeve-Daly S. Rozen L. Hui X. Wu C. Vestergaard K.M. Wilson J.S. Bae S. Maitra S. Ganiatsas C.A. Evans M.M. DeAngelis K.A. Ingalls R.W. Nahf L.T. Horton Jr. M.O. Anderson A.J. Collymore W. Ye V. Kouyoumjian I.S. Zemsteva J. Tam R. Devine D.F. Courtney M.T. Renaud H. Nguyen T.J. O'Connor C. Fizames S. Fauré G. Gyapay C. Dib J. Morissette J.B. Orlin B.W. Birren N. Goodman J. Weissenbach T.L. Hawkins S. Foote D.C. Page E.S. Lander An STS-based map of the human genome Science 270 1995 1945 1954
22. G. Imbert F. Saudou G. Yvert D. Devys Y. Trottier J.-M. Garnier C. Weber J.-L. Mandel G. Cancel N. Abbas A. Durr O. Didierjean G. Stevanin Y. Agid A. Brice Cloning of the gene for spinocerebellar ataxia 2 reveals a locus with high sensitivity to expanded CAG/glutamine repeats Nature Genet. 14 1996 285 291
23. P.A. Ioannou C.T. Amemiya J. Garnes P.M. Kroisel H. Shizuya C. Chen M.A. Batzer P.J. deJong A new bacteriophage P1-derived vector for the propagation of large human DNA fragments Nature Genet. 6 1994 84 89
24. M. Johnston S. Andrews R. Brinkman J. Cooper H. Ding J. Dover Z. Du A. Favello L. Fulton S. Gattung C. Geisel J. Kirsten T. Kucaba L. Hillier M. Jier L. Johnston Y. Yangston P. Latreille E.J. Louis C. Macri E. Mardis S. Menezes L. Mouser M. Nhan L. Rifkin L. Riles H. St. Peter E. Trevaskis K. Vaughan D. Vignati L. Wilcox P. Wohldman R. Waterston R. Wilson M. Vaudin Complete nucleotide sequence of Saccharomyces cerevisiae Science 265 1994 2077 2082
25. K. Krauter K. Montgomery S.-J. Yoon J. LeBlanc-Straceski B. Renault I. Marondel V. Herdman L. Cupelli A. Banks J. Lieman J. Menninger P. Bray-Ward P. Nadkarni J. Weissenbach I. Chumakov D. Cohen P. Miller D. Ward R. Kucherlapati A second generation YAC contig map of human chromosome 12 Nature 377 1995 321 333
26. A.J. Link M.V. Olson Physical map of the Saccharomyces cerevisiae Genetics 127 1991 681 698
27. K.T. Montgomery J.M. LeBlanc P. Tsai J.S. McNinch D.C. Ward P.J. deJong R. Kucherlapati K.S. Krauter Characterization of two chromosome 12 cosmid libraries and development of STSs from cosmids mapped by FISH Genomics 17 1993 682 693
28. J.C. Murray K.H. Buetow J.L. Weber S. Ludwigsen T. Scherpbier-Heddema F. Manion J. Quillen V.C. Sheffield S. Sunden G.M. Duyk J. Weissenbach G. Gyapay C. Dib J. Morrissette G.M. Lathrop A. Vignal R. White N. Matsunami S. Gerken R. Melis H. Albertsen R. Plaetke S. Odelberg D. Ward J. Dausset D. Cohen H. Cann A comprehensive human linkage map with centimorgan density: Cooperative Human Linkage Center (CHLC) Science 265 1994 2049 2054
29. S.M. Pulst A. Nechiporuk T. Nechiporuk S. Gispert X.-N. Chen I. Lopes-Cendes S. Pearlman S. Starkman G. Orozco-Diaz A. Lunkes P. deJong G.A. Rouleau G. Auburger J.R. Korenberg C. Figueroa S. Sahba Moderate expansion of a normally biallelic trinucleotide repeat in spinocerebellar ataxia type 2 Nature Genet. 14 1996 269 276
30. L. Riles J.E. Dutchik A. Baktha B.K. McCauley E.C. Thayer M.P. Leckie V.V. Braden J.E. Depke M.V. Olson Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae Genetics 134 1993 81 150
31. J. Riley R. Butler D. Ogilvie R. Finniear D. Jenner S. Powell R. Anand J.C. Smith A.F. Markham A novel, rapid method for the isolation of terminal sequences from yeast artificial chromosome (YAC) clones Nucleic Acids Res. 18 1990 2887 2890
32. K. Sanpei H. Takano S. Igarashi T. Sato M. Oyake H. Sasaki A. Wakisaka K. Tashiro Y. Ishida T. Ikeuchi R. Koide M. Saito A. Sato T. Tanaka S. Hanyu Y. Takiyama M. Nishizawa N. Shimizu Y. Nomura M. Segawa K. Iwabuchi I. Eguchi H. Tanaka H. Takahashi S. Tsuji Identification of the spinocerebellar ataxia type 2 gene using a direct identification of repeat expansion and cloning technique, DIRECT Nature Genet. 14 1996 277 284
33. G.D. Schuler M.S. Boguski T.J. Hudson L. Hui J. Ma A.B. Castle X. Wu J. Silva H.C. Nusbaum B.B. Birren D.K. Slonim S. Rozen L.D. Stein D. Page E.S. Lander E.A. Stewart A. Aggarwal E. Bajorek S. Brady S. Chu N. Fang D. Hadley M. Harris S. Hussain J.R. Hudson Jr. Genome maps 7: The human transcript map Science 274 1996 547 562
34. H. Shizuya B. Birren U.J. Kim V. Mancino T. Slepak Y. Tachiiri M. Simon Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli Proc. Natl. Acad. Sci. USA 89 1992 8794 8797
35. R.L. Stallings D.C. Torney C.E. Hildebrand J.L. Longmire L.L. Deaven J.H. Jett N.A. Doggett R.K. Moyzis Physical mapping of human chromosomes by repetitive sequence fingerprinting Proc. Natl. Acad. Sci. USA 87 1990 6218 6222
36. R.L. Stallings N.A. Doggett D. Callen S. Apostolou L.Z. Chen J.K. Nancarrow S.A. Whitmore P. Harris H. Michison M. Breuning J.J. Saris J. Fickett M. Cinkosky D.C. Torney C.E. Hildebrand R.K. Moyzis Evaluation of a cosmid contig physical map of human chromosome 16 Genomics 13 1992 1031 1039
37. J. Sulston Z. Du K. Thomas R. Wilson L. Hillier R. Staden N. Halloran P. Green J. Thierry-Mieg L. Qiu S. Dear A. Coulson M. Craxton R. Durbin M. Berks M. Metzstein T. Hawkins R. Ainscough R. Waterston The C. elegans Nature 356 1992 37 41
38. P. Wakem S. Ikeda A. Haake R. Polakowska N. Ewing Y. Sarret M. Duvic D. Berg A. Bassett J.L. Kennedy A. Tuskis E.H. Epstein Jr. L.A. Goldsmith Localization of the Darier disease gene to a 2 cM portion of 12q23–24.1 J. Invest. Dermatol. 106 1996 365 367
39. R. Wilson R. Ainscough K. Anderson C. Baynes M.et al. Berks 2.2 Mb of contiguous nucleotide sequence from chromosome III of C elegans. Nature 368 1994 32 38