메뉴 건너뛰기




Volumn 29, Issue 4, 1997, Pages 508-516

Monte Carlo simulation of protein folding with orientation-dependent monomer-monomer interactions

Author keywords

Compact and flat native structures; Conformational changes; Lattice model; Metastable states

Indexed keywords

ARTICLE; MATHEMATICAL MODEL; PREDICTION; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN FOLDING; PROTEIN INTERACTION; STRUCTURE ANALYSIS; SYSTEM ANALYSIS;

EID: 0030683540     PISSN: 08873585     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1097-0134(199712)29:4<508::AID-PROT10>3.0.CO;2-Q     Document Type: Article
Times cited : (21)

References (20)
  • 1
    • 0002561219 scopus 로고    scopus 로고
    • The formation of protein structure
    • Bohr, J., Bohr, H.G., Brunak, S. The formation of protein structure. Europhys. News 27:50-54, 1996.
    • (1996) Europhys. News , vol.27 , pp. 50-54
    • Bohr, J.1    Bohr, H.G.2    Brunak, S.3
  • 2
    • 0001669870 scopus 로고
    • Kinetic and thermodynamic analysis of proteinlike heteropolymers: Monte Carlo histogram technique
    • Socci, N.D., Onuchic, J.N. Kinetic and thermodynamic analysis of proteinlike heteropolymers: Monte Carlo histogram technique. J. Chem. Phys. 103:4732-1528, 1995.
    • (1995) J. Chem. Phys. , vol.103 , pp. 4732-11528
    • Socci, N.D.1    Onuchic, J.N.2
  • 3
    • 36449000646 scopus 로고
    • Transition state and folding dynamics of proteins and heteropolymers
    • Chan, H.S., Dill, H.S. Transition state and folding dynamics of proteins and heteropolymers. J. Chem. Phys. 100: 9238-9257, 1994.
    • (1994) J. Chem. Phys. , vol.100 , pp. 9238-9257
    • Chan, H.S.1    Dill, H.S.2
  • 4
    • 0030578782 scopus 로고    scopus 로고
    • A criterion that determines fast folding of proteins: A model study
    • Camacho, C.J., Thirumalai, D. A criterion that determines fast folding of proteins: A model study. Europhys. Lett. 35:627, 1996.
    • (1996) Europhys. Lett. , vol.35 , pp. 627
    • Camacho, C.J.1    Thirumalai, D.2
  • 6
    • 0028929204 scopus 로고
    • Kinetics of protein folding
    • Chan, S.C. Kinetics of protein folding. Nature 373:664-665, 1995.
    • (1995) Nature , vol.373 , pp. 664-665
    • Chan, S.C.1
  • 7
    • 4243572706 scopus 로고    scopus 로고
    • Criterion that determines the foldability of proteins
    • Klimov, D.K., Thirumalai, D. Criterion that determines the foldability of proteins. Phys. Rev. Lett. 76:4070-4073, 1996.
    • (1996) Phys. Rev. Lett. , vol.76 , pp. 4070-4073
    • Klimov, D.K.1    Thirumalai, D.2
  • 8
    • 0007725036 scopus 로고
    • Folding kinetics of proteinlike heteropolymers
    • Socci, N.D., Onuchic, J.N. Folding kinetics of proteinlike heteropolymers. J. Chem. Phys. 101:1519-1528, 1994.
    • (1994) J. Chem. Phys. , vol.101 , pp. 1519-1528
    • Socci, N.D.1    Onuchic, J.N.2
  • 10
    • 0028947257 scopus 로고
    • Funnels, pathways, and the energy landscape of protein folding: A synthesis
    • Bryngelson, J.D., Onuchic, J.N., Socci, N.D., Wolynes, P.G. Funnels, pathways, and the energy landscape of protein folding: A synthesis. Proteins 21:167-195, 1995.
    • (1995) Proteins , vol.21 , pp. 167-195
    • Bryngelson, J.D.1    Onuchic, J.N.2    Socci, N.D.3    Wolynes, P.G.4
  • 11
    • 0001209011 scopus 로고    scopus 로고
    • Statistics of kinetic pathways on biased rough energy landscapes with application to protein folding
    • Wang, J., Onuchic, J., Wolynes, P. Statistics of kinetic pathways on biased rough energy landscapes with application to protein folding. Phys. Rev. Lett. 76:4861-4864, 1996.
    • (1996) Phys. Rev. Lett. , vol.76 , pp. 4861-4864
    • Wang, J.1    Onuchic, J.2    Wolynes, P.3
  • 12
    • 4243875619 scopus 로고    scopus 로고
    • Kinetics of a gaussian random copolymer as a prototype for protein folding
    • Timoshenko, E.G., Kuznetsov, Yu.A., Dawson, K.A. Kinetics of a gaussian random copolymer as a prototype for protein folding. Phys. Rev. E 54:4071-4086, 1996.
    • (1996) Phys. Rev. E , vol.54 , pp. 4071-4086
    • Timoshenko, E.G.1    Kuznetsov, Yu.A.2    Dawson, K.A.3
  • 14
    • 0030018099 scopus 로고
    • Folding simulations and computer redesighn of protein A three-helix bundle motifs
    • Olsezewski, K.A., Kolinski, A., Skolnick, J. Folding simulations and computer redesighn of protein A three-helix bundle motifs. Proteins 25:286-299, 1994.
    • (1994) Proteins , vol.25 , pp. 286-299
    • Olsezewski, K.A.1    Kolinski, A.2    Skolnick, J.3
  • 15
    • 0027234766 scopus 로고
    • Engineering of stable and fast-folding sequence of model proteins
    • Shakhnovich, E.I., Gutin, A.M. Engineering of stable and fast-folding sequence of model proteins. Proc. Natl. Acad. Sci. U.S.A. 90:7195-7199, 1993.
    • (1993) Proc. Natl. Acad. Sci. U.S.A. , vol.90 , pp. 7195-7199
    • Shakhnovich, E.I.1    Gutin, A.M.2
  • 16
    • 0345909366 scopus 로고    scopus 로고
    • Disordered polymers
    • in Russian
    • Grosberg, A.Yu. Disordered polymers. Usp. Fiz. Nauk 167:129-166, 1997 (in Russian). [English translation: Phys. Usp., 1997].
    • (1997) Usp. Fiz. Nauk , vol.167 , pp. 129-166
    • Grosberg, A.Yu.1
  • 17
    • 0345909366 scopus 로고    scopus 로고
    • Grosberg, A.Yu. Disordered polymers. Usp. Fiz. Nauk 167:129-166, 1997 (in Russian). [English translation: Phys. Usp., 1997].
    • (1997) Phys. Usp.
  • 18
    • 0002183453 scopus 로고
    • General aspects of computer simulation techniques and their applications in polymer physics
    • Binder, K. (ed.). New York: Oxford University Press
    • Binder, K. General aspects of computer simulation techniques and their applications in polymer physics. In: "Monte Carlo and Molecular Dynamics Simulations in Polymer Science." Binder, K. (ed.). New York: Oxford University Press, 1995:3-46.
    • (1995) Monte Carlo and Molecular Dynamics Simulations in Polymer Science , pp. 3-46
    • Binder, K.1
  • 19
    • 36448999595 scopus 로고
    • Free energy landscape for protein folding kinetics: Intermediates, traps, and multiple pathways in theory and lattice model simulations
    • Abkevich, V.I., Gutin, A.M., Shakhnovich, E.I. Free energy landscape for protein folding kinetics: Intermediates, traps, and multiple pathways in theory and lattice model simulations. J. Chem. Phys. 101:6052-6602, 1994.
    • (1994) J. Chem. Phys. , vol.101 , pp. 6052-6602
    • Abkevich, V.I.1    Gutin, A.M.2    Shakhnovich, E.I.3
  • 20
    • 0001749208 scopus 로고
    • Compensation effect in heterogeneous catalysis
    • Galway, A. Compensation effect in heterogeneous catalysis. Adv. Catal. 26:247-322, 1977.
    • (1977) Adv. Catal. , vol.26 , pp. 247-322
    • Galway, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.