Role of Escherichia coli cspA promoter sequences and adaptation of translational apparatus in the cold shock response

Molecular and General Genetics

Volumn 256, Issue 3, 1997, Pages 282-290

  Goldenberg, D ^a,c   Azar, I ^a,d   Oppenheim, A B ^a   Brandi, A ^b   Pon, C L ^b   Gualerzi, C O ^b  

^a HEBREW UNIVERSITY   (Israel)

^b UNIVERSITY OF CAMERINO   (Italy)

^c HADASSAH HEBREW UNIVERSITY MEDICAL CENTER   (Israel)

^d QBI Enterprises Ltd   (Israel)

Author keywords

CCAAT sequence; Cold shock; Core promoter activity; mRNA stability; Translational control

Indexed keywords

MESSENGER RNA;

ARTICLE; COLD EXPOSURE; COLD TOLERANCE; DNA FLANKING REGION; DNA RESPONSIVE ELEMENT; ESCHERICHIA COLI; GENE INDUCTION; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; REPORTER GENE; RNA TRANSLATION; STEADY STATE; TRANSACTIVATION; TRANSLATION REGULATION;

ADAPTATION, PHYSIOLOGICAL; BACTERIAL PROTEINS; COLD; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; MUTAGENESIS; PROMOTER REGIONS (GENETICS); PROTEIN BIOSYNTHESIS; PROTEIN PROCESSING, POST-TRANSLATIONAL;

ESCHERICHIA COLI; FELIS CATUS; TRIXIS;

EID: 0030669069     PISSN: 00268925     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004380050571     Document Type: Article

References (36)

1. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254
2. Brandi A, Pon CL, Gualerzi CO (1994) Interaction of the main cold shock protein CS7.4 (CspA) of Escherichia coli with the promoter region of hns. Biochimie 76:1090-1098
3. Brandi A, Pietroni P, Gualerzi CO, Pon CL (1996) Post-transcriptional regulation of CspA expression in Escherichia coli. Mol Microbiol 19:231-240
4. Brandi A, Spurio R, Pon CL, Gualerzi CO (1997) Growth phase-dependent transcriptional and post-transcriptional controls modulate the expression of the major Escherichia coli cold shock protein CspA at 37° C, submitted.
5. Cormack RS, Mackie GA (1992) Structural requirements for the processing of Escherichia coli 5S rihosomal RNA by RNase E in vitro. J Mol Biol 228:1078-1080
6. Ehretsmann CP, Carpousis AJ, Krisch HM (1992) Specificity of Escherichia coli endoribonuclease RNase E: in vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site. Genes Dev 6:149-159
7. Etchegaray J-P, Jones PG, Inouye M (1996) Differential thermoregulation of two highly homologous cold-shock genes, cspA and cspB, of Escherichia coli. Genes Cells 1:171-178
8. Falconi M, Higgins NP, Spurio R, Pon CL, Gualerzi CO (1993) Expression of the gene encoding the major bacterial nucleoid protein H-NS is subject to transcriptional autorepression. Mol Microbiol 10:273-282
9. Fang L, Jiang W, Bae W, Inouye M (1997) Promoter-independent cold-shock induction of cspA and its derepression at 37°C by mRNA stabilization. Mol Microbiol 23:355-364
10. L promoter at low temperature. Proc Natl Acad Sci USA 92:2184-2188
11. Goldenberg D, Azar I, Oppenheim AB (1996) Differential mRNA stability of the cspA gene in the cold-shock response of Escherichia coli. Mol Microbiol 19:241-248
12. Goldstein J, Pollitt NS, Inouye M (1990) Major cold shock protein of Escherichia coli. Proc Natl Acad Sci USA 87:283-287
13. Iost I, Dreyfus M (1994) mRNA can be stabilized by DEAD-box proteins. Nature 372:193-196
14. Jiang W, Jones P, Inouye M (1993) Chloramphenicol induces the transcription of the major cold shock gene of Escherichia coli, cspA. J Bacteriol 175:5824-5828
15. Jones PG, Inouye M (1994) The cold-shock response a hot topic. Mol Microbiol 11:811-818
16. Jones PG, VanBogelen RA, Neidhardt FC (1987) Induction of proteins in response to low temperature in Escherichia coli. J Bacteriol 169:2092-2095
17. Jones PG, Krah R, Tafuri SR, Wollfe AP (1992) DNA gyrase. CS7.4, and the cold shock response in Escherichia coli. J Bact 174:5798-5802
18. Jones PG, Mitta M, Kim Y, Jiang W, Inouye M (1996) Cold shock induces a major ribosomal-associated protein that unwinds double-stranded RNA in Escherichia coli. Proc Natl Acad Sci USA 93:76-80
19. Josaitis CA, Gaal T, Gourse RE (1995) Stringent control and growth-rate-dependent control have nonidentical promoter sequence requirements. Proc Natl Acad Sci USA 92:1117-1121
20. Kohara Y, Akiyama K, Isono K (1987) The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell 50:495-508
21. La Teana A, Brandi A, Falconi M, Spurio R, Pon CL (1991) Identification of a cold shock transcriptional enhancer of the Escherichia coli gene encoding nucleoid protein H-NS. Proc Natl Acad Sci USA 88: 10907-10911
22. Lee SJ, Xie A, Jiang W, Etchegaray JP, Jones PG, Inouye M (1994) Family of the major cold-shock protein, CspA (CS7.4), of Escherichia coli, whose members show a high sequence similarity with the eukaryotic Y-box binding proteins. Mol Microbiol 11:833-839
23. Liu J, Parkinson JS (1989) Genetic and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control. J Bacteriol 171:1254-1261
24. Mackie GA (1992) Secondary structure of the mRNA for ribosomal protein S20. J Biol Chem 267:1054-1061.
25. Miller JH (1972) Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
26. Nakashima K, Kanamaru K, Mizuno T, Horikoshi K (1996) A novel member of the cspA family of genes that is induced by cold shock in Escherichia coli. J Bacteriol 178:2994-2997
27. Newkirk K, Feng W, Jiang W, Tejero R, Emerson SD, Inoyne M, Montelione GT (1994) Solution NMR structure of the major cold shock protein (CspA) from Escherichia coli, identification of a binding eptope for DNA. Proc Natl Acad Sci USA 91:5114-5118
28. Rao L, Ross W, Appleman J, Gaul T, Leirmo S, Sehlax P, Record T, Gourse RL (1994) Factor-independent activation of rrnB P1: an extended promoter with an upstream element that dramatically increases promoter strength. J Mol Biol 235:1421-1435
29. Ross W, Gosink KK, Salomon JKI, Igarashi K, Zou C, Ishihama A, Severinov K, Course RL (1993) A third recognition element in bacterial promoters: DNA binding by a subunit of RNA polymerase. Science 262:1407-1413
30. Schindelin H, Jiang W, Inouye M, Heinemann U (1994) Crystal structure of CspA, the major cold shock protein of Escherichia coli. Proc Natl Acad Sci USA 91:5119-5123
31. Seed B, Sheen JY (1988) A simple phase-extraction assay for chloramphenicol acetyltransferase activity. Gene 67:271-277
32. Tanabe H, Goldstein J, Yang M, Inouye M (1992) Identification of the promoter region of the Escherichia coli major cold shock gene, cspA. J Bacteriol 174:3867-3873
33. VanBogelen RA, Neidhardt FC (1990) Ribosomes as sensors of heat and cold shock in Escherichia coli. Proc Natl Acad Sci USA 87:5589-5593
34. Wistow G (1990) Cold shock and DNA binding. Nature 344:823-824
35. Wolffe AP, Tafuri S, Ranjan M, Familari M (1992) The Y-box factors: a family of nucleic acid binding proteins conserved from Escherichia coli to man. The New Biologist 4:290-298
36. Yamanaka KT, Mitani T, Ogura H, Niki H, Hiraga S (1994) Cloning, sequencing, and characterization of multicopy supressors of a mukB mutation in Escherichia coli. Mol Microbiol 13:301-312