RIBOWEB: Linking Structural Computations to a Knowledge Base of Published Experimental Data

Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology, ISMB 1997

Volumn , Issue , 1997, Pages 84-87

  Chen, Richard O ^a   Felciano, Ramon ^a   Altman, Russ B ^a  

^a STANFORD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ESCHERICHIA COLI; KNOWLEDGE BASED SYSTEMS; SEMANTICS;

ANALYSIS TOOLS; BIOLOGICAL DATA; COMPUTATIONAL ANALYSIS; DISTRIBUTED COMPUTATIONS; EVALUATING MODELS; HYPOTHESIS TESTING; SCIENTIFIC REASONING; SEMANTIC MODELLING; STRUCTURAL COMPUTATIONS; THREE-COMPONENT;

USER INTERFACES;

ARTICLE; ARTIFICIAL INTELLIGENCE; CHEMISTRY; COMPUTER NETWORK; COMPUTER PROGRAM; ESCHERICHIA COLI; FACTUAL DATABASE; ONLINE SYSTEM; RIBOSOME;

ARTIFICIAL INTELLIGENCE; COMPUTER COMMUNICATION NETWORKS; DATABASES, FACTUAL; ESCHERICHIA COLI; ONLINE SYSTEMS; RIBOSOMES; SOFTWARE;

EID: 0030628250     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (14)

1. Costian, C. & Marinescu, D., Socrates: An Environment for High Performance Computing. (1995). IEEE,: p. 199-206.
2. Medigue, C, Vermat, T., Bisson, G., Viari, A., & Danchin, A. Cooperative computer system for genome sequence analysis, in Third International Conference on Intelligent Systems for Molecular Biology. 1995. Cambridge, England: AAA! Press.
3. Fischman, J., Working the Web With a Virtual Lab and Some Java. (1996). Science, 273(2 August 1996): p. 591-593.
4. Etzold, T., Ulyanov, A., & Argos, P., SRS: Information Retrieval System for Molecular Biology Data Banks. (1996). Methods in Enzymology, 266: p. 114.
5. Buneman, P., Davidson, S.B., Hart, K., Overton, C, & Wong, L., eds. A Data Transformation System for Biological Data Sources Proceedings of 21st International Conference on Very Large Data Bases. 1995: Zurich, Switzerland.
6. Buneman, P., Naqvi, S., Tannen, V., & Wong, L., Principles of Programming with Complex Objects and Collection Types. (1995). Theoretical Computer Science, 149(1): p. 3-48.
7. Bourne, P., Gribskov, M., Ten Eyck, L., & Taylor, S., PKDB: The Protein Kinase Database Project. (1996). Protein Data Bank Quarterly Newsletter, T7: p. http://www.pdb.bnl.gov/newslttr/txt/newslttr.txtjul96.
8. Allen, G., Patrick, T., & Murtaugh, M. World Wide Web-based access to heterogenous information resources for cytokine research, in 20th Annual AMIA Fall Symposium. 1996. Washington, D.C.: American Medical Informatics Association.
9. Karp, P.D., 77ic design space of frame knowledge representation systems, 1992, SRI International Artificial Intelligence Center.
10. Achard, F. & Barillot, E., Ubiquitous Distributed Objects with CORBA, in Pacific Symposium on Biocomputing, 1997, R.B. Alonan, étal, Editors. 1997, World Scientific: Singapore, p. 39-50.
11. l.Altman, R.B., A probabilistic approach to determining biological structure: integrating uncertain data sources. (1995). Int. J. Human-Computer Studies, 42: p. 593-616.
12. Fink, D.L., Chen, R.O., Noller, H.F., & Altman, R.B., Computational methods for defining the allowed conformational space of 168 rRNA based on chemical footprinting data. (1996). RNA, 2: p. 851-866.
13. Malhotra, A. & Harvey, S.C., A Quantitative model of the E. coli 16S RNA in the 30S Ribosomal SubuniŁ (1994). J Mol Bio, 240: p. 308-340.
14. Felciano, R.F., Chen, R.O., & Altman, R.B., RNA secondary structure as a reusable interface to biological information resources. (l996).Gene-COMBIS,m press: http://wwwl.elsevier.nl/journals/genecombis/jnl/articles /S0378111996008554/.