Alleviation of historic H1-mediated transcriptional repression and chromatin compaction by the acidic activation region in chromosomal protein HMG-14

Molecular and Cellular Biology

Volumn 17, Issue 10, 1997, Pages 5843-5855

  Ding, Han Fei ^a   Bustin, Michael ^b   Hansen, Ulla ^a,c  

^a HARVARD MEDICAL SCHOOL   (United States)

^b NATIONAL CANCER INSTITUTE   (United States)

^c DANA FARBER CANCER INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOME PROTEIN; HISTONE H1; RNA POLYMERASE II; HIGH MOBILITY GROUP PROTEIN; HISTONE; HYBRID PROTEIN; VIRUS RNA;

ARTICLE; CHROMATIN STRUCTURE; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; GENE ACTIVATION; HUMAN; HUMAN CELL; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN FOLDING; TRANSCRIPTION REGULATION; AMINO ACID SEQUENCE; BIOLOGICAL MODEL; BIOSYNTHESIS; CHEMISTRY; CHROMATIN; GENE DELETION; GENETIC TRANSCRIPTION; GENETICS; HELA CELL; METABOLISM; MOLECULAR GENETICS; PHYSIOLOGY; SIMIAN VIRUS 40; TRANSACTIVATION;

MAMMALIA; SIMIAE; SIMIAN VIRUS; SIMIAN VIRUS 40;

AMINO ACID SEQUENCE; CHROMATIN; HELA CELLS; HIGH MOBILITY GROUP PROTEINS; HISTONES; HUMANS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; RECOMBINANT FUSION PROTEINS; RNA POLYMERASE II; RNA, VIRAL; SEQUENCE DELETION; SIMIAN VIRUS 40; TRANS-ACTIVATION (GENETICS); TRANSCRIPTION, GENETIC;

EID: 0030610561     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/mcb.17.10.5843     Document Type: Article

References (75)

1. Albright, S. C., J. M. Wiseman, R. A. Lange, and W. T. Garrard. 1980. Subunit structures of different electrophoretic forms of nucleosomes. J. Biol. Chem. 255:3673-3684.
2. Alfonso, P. J., M. P. Crippa, J. J. Hayes, and M. Bustin. 1994. The footprint of chromosomal proteins HMG-14 and HMG-17 on chromatin subunits. J. Mol. Biol. 236:189-198.
3. Allan, J., P. G. Hartman, C. Crane-Robinson, and F. X. Aviles. 1980. The structure of histone H1 and its location in chromatin. Nature 288:675-679.
4. Allan, J., G. J. Cowling, N. Harborne, P. Cattini, R. Craigie, and H. Gould. 1981. Regulation of the higher-order structure of chromatin by histones H1 and H5. J. Cell Biol. 90:279-288.
5. Ambrose, C., H. Lowman, A. Rajadhyaksha, V. Blasquez, and M. Bina. 1990. Location of nucleosomes in simian virus 40 chromatin. J. Mol. Biol. 214: 875-884.
6. Barratt, M. J., C. A. Hazzalin, N. Zhelev, and L. C. Mahadevan. 1994. A mitogen- and anisomycin-stimulated kinase phosphorylates HMG-14 in its basic amino-terminal domain in vivo and on isolated mononucleosomes. EMBO J. 13:4524-4535.
7. Batson S. C., R. Sundseth, C. V. Heath, M. Samuels, and U. Hansen. 1992. In vitro initiation of transcription by RNA polymerase II on in vivo-assembled chromatin templates. Mol. Cell. Biol. 12:1639-1651.
8. Batson, S. C., S. Rimsky, R. Sundseth, and U. Hansen. 1993. Association of nucleosome-free regions and basal transcription factors with in vivo-assembled chromatin templates active in vitro. Nucleic Acids Res. 21:3459-3468.
9. Belikov, S. V., A. I. Belgovsky, O. V. Preobrazhenskaya, V. L. Karpov, and A. D. Mirzabekov. 1993. Two non-histone proteins are associated with the promoter region and histone H1 with the transcribed region of active hsp-70 genes as revealed by UV-induced DNA-protein crosslinking in vivo. Nucl. Acids Res. 21:1031-1034.
10. Bertrand-Mercat, P., and J. R. Pasqualini. 1991. Antagonistic effect of the antiestrogen 4-hydroxytamoxifen on estradiol-stimulated acetylation of nuclear high mobility group (HMG) proteins in the uterus of newborn guinea-pigs. Life Sci. 48:2081-2087.
11. Bustin, M., D. A. Lehn, and D. Landsman. 1990. Structural features of the HMG chromosomal proteins and their genes. Biochim. Biophys. Acta 1049: 231-243.
12. Bustin, M., P. S. Becerra, M. P. Crippa, D. A. Lehn, J. M. Pash, and J. Shiloach. 1991. Recombinant human chromosomal proteins HMG-14 and HMG-17. Nucleic Acids Res. 19:3115-3121.
13. Bustin, M., L. Trieschmann, and Y. V. Postnikov. 1995. The HMG-14/-17 chromosomal protein family: architectural elements that enhance transcription from chromatin templates. Semin. Cell Biol. 6:247-255.
14. Clark, D. J., and T. Kimura. 1990. Electrostatic mechanism of chromatin folding. J. Mol. Biol. 211:883-896.
15. Côté, J., J. Quinn, J. L. Workman, and C. L. Peterson. 1994. Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex. Science 265:53-60.
16. Crippa, M. P., P. J. Alfonso, and M. Bustin. 1992. Nucleosome core binding region of chromosomal protein HMG-17 acts as an independent functional domain. J. Mol. Biol. 228:442-449.
17. Crippa, M. P., L. Trieschmann, P. J. Alfonso, A. P. Wolffe, and M. Bustin. 1993. Deposition of chromosomal protein HMG-17 during replication affects the nucleosomal ladder and transcriptional potential of nascent chromatin. EMBO J. 12:3855-3864.
18. Croston, G. E., L. A. Kerrigan, L. M. Lira, D. R. Marshak, and J. T. Kadonaga. 1991. Sequence-specific antirepression of histone H1-mediated inhibition of basal RNA polymerase II transcription. Science 251:643-649.
19. Ding, H.-F., and U. Hansen. Unpublished data.
20. Ding, H.-F., S. Rimsky, S. C. Batson, M. Bustin, and U. Hansen. 1994. Stimulation of RNA polymerase II elongation by chromosomal protein HMG-14. Science 265:796-799.
21. Ding, H.-F., L. Trieschmann, Y. V. Postnikov, A. Rickers, M. Bustin, and U. Hansen. Unpublished data.
22. Ericsson, C., U. Grossbach, B. Bjorkroth, and B. Daneholt. 1990. Presence of histone H1 on an active Balbiani ring gene. Cell 60:73-83.
23. Feng, J., and B. Villeponteau. 1990. Serum stimulation of the c-fos enhancer induces reversible changes in c-fos chromatin structure. Mol. Cell. Biol. 10:1126-1133.
24. Garrard, W. T. 1991. Histone H1 and the conformation of transcriptionally active chromatin. Bioessays 13:87-88.
25. Giri, C., D. Landsman, N. Soares, and M. Bustin. 1987. Modulation of the cellular ratio of chromosomal high mobility group proteins 14 to 17 in transfected cells. J. Biol. Chem. 262:9839-9843.
26. Goldman, M. A., G. P. Holmquist, M. C. Gray, L. A. Caston, and A. Nag. 1984. Replication timing of genes and middle repetitive sequences. Science 224:686-692.
27. Goodwin, G. H., and C. G. P. Mathew. 1982. Role in gene structure and function, p. 193-221. In E. W. Johns (ed.), The HMG chromosomal proteins. Academic Press Inc., New York, N.Y.
28. Graziano, V., and V. Ramakrishnan. 1990. Interaction of HMG14 with chromatin. J. Mol. Biol. 214:897-910.
29. Hansen, J. C., and A. P. Wolffe. 1992. Influence of chromatin folding on transcription initiation and elongation by RNA polymerase III. Biochemistry 31:7977-7988.
30. Hatton, K. S., V. Dhar, E. H. Brown, M. A. Iqbal, S. Stuart, V. T. Didamo, and C. L. Schildkraut. 1988. Replication program of active and inactive multigene families in mammalian cells. Mol. Cell. Biol. 8:2149-2158.
31. Imbalzano, A. N., H. Kwon, M. R. Green, and R. E. Kingston. 1994. Facilitated binding of TATA-binding protein to nucleosomal DNA. Nature 370: 481-485.
32. Izban, M. G., and D. S. Luse. 1992. Factor-stimulated RNA polymerase II transcribes at physiological elongation rates on naked DNA but very poorly on chromatin templates. J. Biol. Chem. 267:13647-13655.
33. Kamakaka, R. T., and J. O. Thomas. 1990. Chromatin structure of transcriptionally competent and repressed genes. EMBO J. 9:3997-4006.
34. Kamakaka, R. T., M. Bulger, and J. T. Kadonaga. 1993. Potentiation of RNA polymerase II transcription by Gal4-VP16 during but not after DNA replication and chromatin assembly. Genes Dev. 7:1779-1795.
35. Kimura, T., F. C. Mills, J. Allan, and H. Gould. 1983. Selective unfolding of erythroid chromatin in the region of the active β-globin gene. Nature 306: 709-712.
36. Kornberg, R. D., and Y. Lorch. 1992. Chromatin structure and transcription. Annu. Rev. Cell Biol. 8:563-587.
37. Kwon, H., A. N. Imbalzano, P. A. Khavarl, R. E. Kingston, and M. R. Green. 1994. Nucleosome disruption and enhancement of activator binding by a human SWI/SNF complex. Nature 370:477-481.
38. Landsman, D., and M. Bustin. 1991. Assessment of the transcriptional activation potential of the HMG chromosomal proteins. Mol. Cell. Biol. 11: 4483-4489.
39. Leuba, S. H., J. Zlatanova, and K. van Holde. 1993. On the location of histones H1 and H5 in the chromatin fiber. Studies with immobilized trypsin and chymotrypsin. J. Mol. Biol. 229:917-929.
40. Lu, Q., L. L. Wallrath, and S. C. R. Elgin. 1994. Nucleosome positioning and gene regulation. J. Cell. Biochem. 55:83-92.
41. Ma, J., and M. Ptashne. 1987. Deletion analysis of GAL4 defines two transcriptional activating segments. Cell 48:847-853.
42. Majumdar, A., D. Brown, S. Kerby, I. Rudzinski, T. Polte, Z. Randhawa, and M. M. Seidman. 1991. Sequence of human HMG2 cDNA. Nucleic Acids Res. 19:6643.
43. Mardian, J. K. W., A. E. Paton, G. J. Bunick, and D. E. Olins. 1980. Nucleosome cores have two specific binding sites for nonhistone chromosomal proteins HMG 14 and HMG 17. Science 209:1534-1536.
44. Nacheva, G. A., D. Y. Guschin, O. V. Preobrazhenskaya, V. L. Karpov, K. K. Ebralidse, and A. D. Mirzabekov. 1989. Change in the pattern of histone binding to DNA upon transcriptional activation. Cell 58:27-36.
45. Nelson, P. P., S. C. Albright, J. M. Wiseman, and W. T. Garrard. 1979. Reassociation of histone H1 with nucleosomes. J. Biol. Chem. 254:11751-11760.
46. O'Neill, T. E., G. Meersseman, S. Pennings, and E. M. Bradbury. 1995. Deposition of histone H1 onto reconstituted nucleosome arrays inhibits both initiation and elongation of transcripts by T7 RNA polymerase. Nucleic Acids Res. 23:1075-1082.
47. Paranjape, S. M., R. T. Kamakaka, and J. T. Kadonaga. 1994. Role of chromatin structure in the regulation of transcription by RNA polymerase II. Annu. Rev. Biochem. 63:265-297.
48. Paranjape, S. M., A. Krumm, and J. T. Kadonaga. 1995. HMG17 is a chromatin-specific transcriptional coactivator that increases the efficiency of transcription initiation. Genes Dev. 9:1978-1991.
49. Pasqualini, J. R., R. Sterner, P. Mercat, and V. G. Allfrey. 1989. Estradiol enhanced acetylation of nuclear high mobility group proteins of the uterus of newborn guinea pigs. Biochem. Biophys. Res. Commun. 161:1260-1266.
50. Pederson, D. S., F. Thoma, and R. T. Simpson. 1986. Core particle, fiber, and transcriptionally active chromatin structure. Annu. Rev. Cell Biol. 2:117-147.
51. Peterson, C. L., and J. W. Tamkun. 1995. The SWI-SNF complex: a chromatin remodeling machine? Trends Biochem. Sci. 20:143-146.
52. Postnikov, Y. V., L. Trieschmann, A. Rickers, and M. Bustin. 1995. Homodimers of chromosomal proteins HMG-14 and HMG-17 in nucleosome cores. J. Mol. Biol. 252:423-432.
53. Pruss, D., B. Bartholomew, J. Persinger, J. Hayes, G. Arents, E. N. Moudrianakis, and A. P. Wolffe. 1996. An asymmetric model for the nucleosome: a binding site for linker histones inside the DNA gyres. Science 274:614-617.
54. Renz, M., P. Nehls, and J. Hozier. 1977. Involvement of histone H1 in the organization of the chromosome fiber. Proc. Natl. Acad. Sci. USA 74:1879-1883.
55. Sandeen, G., W. I. Wood, and G. Felsenfeld. 1980. The interaction of high mobility proteins HMG14 and 17 with nucleosomes. Nucleic Acids Res. 8:3757-3778.
56. Shykind, B. M., J. Kim, and P. A. Sharp. 1995. Activation of the TFIID-TFIIA complex with HMG-2. Genes Dev. 9:1354-1365.
57. Simpson, R. T. 1978. Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones. Biochemistry 17: 5524-5531.
58. Spaulding, S. W., N. W. Fucile, D. P. Bofinger, and L. G. Sheflin. 1991. Cyclic adenosine 3′,5′-monophosphate-dependent phosphorylation of HMG 14 inhibits its interactions with nucleosomes. Mol. Endocrinol. 5:42-50.
59. Stalder, J., M. Groudine, J. B. Dodgson, J. D. Engel, and H. Weintraub. 1980. Hb switching in chickens. Cell 19:973-980.
60. Staynov, D. Z., and C. Crane-Robinson. 1988. Footprinting of linker histones H5 and H1 on the nucleosome. EMBO J. 7:3685-3691.
61. Thoma, F., T. Koller, and A. Klug. 1979. Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin. J. Cell Biol. 83:403-427.
62. Thomas, J. O. 1984. The higher order structure of chromatin and histone H1. J. Cell Sci. Suppl. 1:1-20.
63. Trieschmann, L., P. J. Alfonso, M. P. Crippa, A. P. Wolffe, and M. Bustin. 1995. Incorporation of chromosomal proteins HMG-14/-17 into nascent nucleosomes induces an extended chromatin conformation and enhances the utilization of active transcription complexes. EMBO J. 14:1478-1489.
64. Trieschmann, L., Y. V. Postnikov, A. Rickers, and M. Bustin. 1995. Modular structure of chromosomal proteins HMG-14/-17: definition of a transcriptional enhancement domain distinct from the nucleosomal binding domain. Mol. Cell. Biol. 15:6663-6669.
65. Tsukiyama, T., and C. Wu. 1995. Purification and properties of an ATP-dependent nucleosome remodeling factor. Cell 83:1011-1020.
66. Uberbacher, E. C., J. K. W. Mardian, R. M. Rossi, D. E. Olins, and G. J. Bunick. 1982. Neutron scattering studies and modeling of high mobility group 14 core nucleosome complex. Proc. Natl. Acad. Sci. USA 79:5258-5262.
67. van Holde, K. E. 1989. Chromatin. Springer-Verlag New York Inc., New York, N.Y.
68. Vilarreal, L. P. 1991. Relationship of eukaryotic DNA replication to committed gene expression: general theory for gene control. Microbiol. Rev. 55:512-542.
69. Weintraub, H. 1984. Histone-H1-dependent chromatin superstructures and the suppression of gene activity. Cell 38:17-27.
70. Weintraub, H., and M. Groudine. 1976. Chromosomal subunits in active genes have an altered conformation. Science 193:848-856.
71. Winston, F., and M. Carlson. 1992. Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection. Trends Genet. 8:387-391.
72. Wolffe, A. 1995. Chromatin: structure and function, 2nd ed. Academic Press Inc., London, United Kingdom.
73. Wolffe, A. P. 1994. Nucleosome positioning and modification: chromatin structures that potentiate transcription. Trends Biochem. Sci. 19:240-244.
74. Workman, J. L., and A. R. Buchman. 1993. Multiple functions of nucleosomes and regulatory factors in transcription. Trends Biochem. Sci. 18:90-95.
75. Zlatanova, J. 1990. Histone H1 and the regulation of transcription of eukaryotic genes. Trends Biochem. Sci. 15:273-276.