Identification of sequence motifs causing band compressions on human cDNA sequencing

DNA Research

Volumn 3, Issue 2, 1996, Pages 81-86

  Yamakawa, Hisashi ^a   Nakajima, Daisuke ^a   Ohara, Osamu ^a  

^a KAZUSA DNA RESEARCH INSTITUTE   (Japan)

Author keywords

Band compression; DNA sequencing; Human cDNA; Sequence motif

Indexed keywords

COMPLEMENTARY DNA;

ARTICLE; ARTIFACT; CHEMISTRY; DNA SEQUENCE; ELECTROPHORESIS; HUMAN; INSTRUMENTATION; METHODOLOGY; NUCLEOTIDE SEQUENCE; SYNTHESIS;

ARTIFACTS; BASE SEQUENCE; DNA, COMPLEMENTARY; ELECTROPHORESIS; HUMANS; SEQUENCE ANALYSIS, DNA;

EID: 0030606510     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/3.2.81     Document Type: Article

References (9)

1. Maxam, A. M. and Gilbert, W. 1977, A new method for sequencing DNA, Proc. Natl. Acad. Sci. USA, 74, 560-564.
2. Sanger, F., Nicklen, S., and Coulson, A. R. 1977, DNA sequencing with chain-terminating inhibitors, Proc. Natl. Acad. Sci. USA, 74, 5463-5467.
3. Sanger, F., Coulson, A. R., Hong, G. F., Hill, D. F., and Peterson, G. B. 1982, Nucleotide sequence of bacterio-phage λ DNA, J. Mol. Biol., 162, 729-773.
4. Hawkins, T. L. and Sulston, J. E. 1991, The resolution of compressions in automated fluorescent sequencing, Nucl. Acids Res., 19, 2784-2785.
5. Ambartsumyan, N. S. and Mazo, A. M. 1980, Elimination of the secondary structure effect in gel sequencing of nucleic acids, FEBS Lett., 114, 265-268.
6. Mills, D. R. and Kramer, F. R. 1979, Structure independent nucleotide sequence analysis, Proc. Natl. Acad. Sci. USA, 76, 2232-2235.
7. Mizusawa, S., Nishimura, S., and Seela, F. 1986, Improvement of the dideoxy chain termination method of DNA sequencing by use of deoxy-7-deazaguanosine triphosphate in place of dGTP, Nucl. Acids Res., 14, 1319-1324.
8. Nomura, N., Nagase, T., Miyajima, N., Sazuka, T., Tanaka, A., Sato, S., Seki, N., Kawarabayasi, Y., Ishikawa, K., and Tabata, S. 1994, Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1, DNA Res., 1, 223-229.
9. Nagase, T., Miyajima, N., Tanaka, A., Sazuka, T., Seki, N., Sato, S., Tabata, S., Ishikawa, K., Kawarabayasi, Y., Kotani, H., and Nomura, N. 1995, Prediction of the coding sequences of unidentified human genes. III. The coding sequences of 40 new genes (KIA0081-KIAA0120) deduced by analysis of cDNA clones from human cell line KG-1, DNA Res., 2, 37-43.