The non-random distribution of UV-induced photoproducts in the nuclear matrix and non-matrix DNA fractions

Cancer Letters

Volumn 108, Issue 2, 1996, Pages 215-223

  Widlak, Piotr ^a,c   Bykov, Vladimir J ^b   Hemminki, Kari ^b   Rzeszowska Wolny, Joanna ^a  

^a INSTITUTE OF ONCOLOGY   (Poland)

^b KAROLINSKA INSTITUTE   (Sweden)

^c UNIVERSITY OF TEXAS AT DALLAS   (United States)

Author keywords

DNA photoproducts; MAR (matrix attached region) sequence; Nuclear matrix; Ultraviolet radiation

Indexed keywords

DNA; NUCLEAR PROTEIN; PHOSPHORUS 32;

ARTICLE; CELL NUCLEUS MATRIX; CHROMATIN; COMPLEX FORMATION; CONTROLLED STUDY; DNA ADDUCT; DNA DAMAGE; DNA PROTEIN COMPLEX; HUMAN; HUMAN CELL; IMMUNOGLOBULIN GENE; ISOTOPE LABELING; LYMPHOCYTE; PRIORITY JOURNAL; RADIATION MUTAGENESIS; ULTRAVIOLET RADIATION;

ANIMALS; DNA; DNA ADDUCTS; DNA DAMAGE; HUMANS; IMMUNOGLOBULIN KAPPA-CHAINS; LYMPHOCYTES; MICE; NUCLEAR MATRIX; NUCLEAR PROTEINS;

EID: 0030606245     PISSN: 03043835     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0304-3835(96)04426-6     Document Type: Article

References (42)

1. [1] Pienta, K.J., Partin, A.W. and Coffey, D.S. (1989) Cancer as a disease of DNA organization and dynamic cell structure, Cancer Res., 49, 2525-2532.
2. [2] Vemuri, M.C., Raju, N.N. and Malhotra, S.K. (1993) Recent advances in nuclear matrix function, Cytobios, 76, 117-128.
3. [3] Getzenberg, R.H. (1994) Nuclear matrix and the regulation of gene expression: tissue specificity, J. Cell. Biochem., 55, 22-31.
4. [4] Pienta, K.J. and Ward, W.S. (1994) An unstable nuclear matrix may contribute to genetic instability, Med. Hypotheses,, 42, 45-52.
5. [5] Ryan, A.J., Billett, M.A. and O'Connor, P.J. (1986) Selective repair of methylated purines in regions of chromatin DNA, Carcinogenesis, 7, 1497-1503.
6. [6] Ueyama, H., Matsuura, T., Nomi, S., Nakayasu, H. and Ueda, K. (1981) Binding of benzo[a]pyrene to rat liver nuclear matrix, Life Sci., 29, 655-661.
7. [7] Mironov, N.M., Grover, P.L. and Sims, P. (1983) Preferential binding of polycyclic hydrocarbons to matrix-bound DNA in rat liver nuclei, Carcinogenesis, 4, 189-193.
8. [8] Obi, F.O., Ryan, A.J. and Billett, M.A. (1986) Preferential binding of the carcinogen benzo[a]pyrene to DNA in active chromatin and the nuclear matrix, Carcinogenesis, 7, 907-913.
9. [9] Perin-Roussel, O., Barat, N. and Zajdela, F. (1988) Non-random distribution of dibenzo[a,e]fluoranthene-induced DNA adducts in DNA loops in mouse fibroblast nuclei, Carcinogenesis, 9, 1383-1388.
10. [10] Widlak, P. and Rzeszowska-Wolny, J. (1993) DNA and proteins of the nuclear matrix are the main targets of benzo[a]-pyrene's action in rat hepatocytes, Acta Biochim. Polon., 40, 559-562.
11. [11] Gupta, R.C., Dighe, N.R., Randerath, K. and Smith, H.C. (1985) Distribution of initial and persistent 2-acetylaminofluorene-induced DNA adducts within DNA loops, Proc. Natl. Acad. Sci. USA, 82, 6605-6608.
12. [12] Widlak, P. and Rzeszowska-Wolny, J. (1994) DNA repair is less efficient in the nuclear matrix than in non-matrix nuclear fractions in the liver of rats treated with 2-aminofluorene, Cancer Lett., 78, 115-120.
13. [13] Xu, J., Manning, C.R. and Patierno, S.R. (1994) Preferential formation and repair of chromium-induced DNA adducts and DNA-protein crosslinks in nuclear matrix DNA, Carcinogenesis, 15, 1443-1450.
14. [14] MacLeod, M.C. (1995) Interaction of bulky chemical carcinogens with DNA in chromatin, Carcinogenesis, 16, 2009-2014.
15. [15] Boulikas, T. (1992) Evolutionary consequences of nonrandom damage and repair of chromatin domains, J. Mol. Evol., 35, 156-180.
16. [16] Pfeifer, G.P., Drouin, R., Riggs, A.D. and Holmquist, G.P. (1992) Binding of transcription factors creates hot spots for UV photoproducts in vivo, Mol. Cell, Biol., 12, 1798-1804.
17. [17] Tornaletti, S. and Pfeifer, G.P. (1995) UV light as a footprinting agent: modulation of UV-induced DNA damage by transcription factors bound at the promoters of three human genes, J. Mol. Biol., 249, 714-728.
18. [18] Mullenders, L.H.F., van Kesteren, A.C., Bussmann, C.J.M., van Zeeland, A.A. and Natarajan, A.T. (1984) Preferential repair of nuclear matrix associated DNA in xeroderma pigmentosum complementation group C, Mutat. Res., 141, 75-82.
19. [19] McCready, S.J. and Cook, P.R. (1984) Lesion induced in DNA by ultraviolet light are repaired at the nuclear cage, J. Cell Sci., 70, 189-196.
20. [20] Harless, J. and Hewitt, R.R. (1987) Intranuclear localization of UV-induced DNA repair in human VA13 cells, Mutat. Res., 183, 177-184.
21. [21] Mullenders, L.H.F., van Kesteren, Unknown, van Leeuwen, A.C., van Zeeland, A.A. and Natarajan, A.T. (1988) Nuclear matrix associated DNA is preferentially repaired in normal human fibroblasts, exposed to a low dose of ultraviolet light but not in Cockayne's syndrome fibroblasts, Nucleic Acids Res., 16, 10607-10622.
22. [22] Mullenders, L.H.F., Venema, J., van Hoffen, A., Mayne, L.V., Natarajan, A.T. and van Zeeland, A.A. (1990) The role of the nuclear matrix in DNA repair. In: Mutation and the Environment, Part A, Wiley-Liss, New York, pp. 223-232.
23. [23] Mitchell, D.L. and Nairn, R.S. (1989) The biology of the (6-4)photoproduct, Photochem. Photobiol., 49, 805-819.
24. [24] Brash, D.E. (1988) UV mutagenic photoproducts in Escherichia coli and human cells: a molecular genetics perspective on human skin cancer, Photochem. Photobiol., 48, 59-66.
25. [25] IARC (1992) IARC Monographs on the Evaluation of Carcinogenic Risk to Humans: Solar and Ultraviolet Radiation, IARC Scientific Publication no. 55, IARC, Lyon, pp. 73-138.
26. [26] Cockerill, P.N. and Garrard, W.T. (1986) Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites, Cell, 44, 273-282.
27. [27] Pierce, J.W., Gifford, A.M. and Baltimore, D, (1991) Silencing of the expression of the immunoglobulin kappa gene in non-B cells, Mol. Cell. Biol., 11, 1431-1437.
28. [28] Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning, a Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
29. [29] Widlak, P., Bykov, V.J. and Hemminki, K. (1995) Formation of UV-photoadducts during DNA purification, Mutat. Res., 347, 117-119.
30. 32P-postlabeling, Carcinogenesis, 16, 113-118.
31. 32P-postlabeling analysis of non-radioactive aromatic carcinogen DNA adducts, Carcinogenesis, 3, 1081-1092.
32. [32] Widlak, P., Rogolinski, J. and Rzeszowska-Wolny, J. (1995) Interactions of the matrix attachment region of DNA with the matrix proteins from the copper preincubated liver nuclei, Acta Biochim. Polon., 42, 205-210.
33. [33] Lyamichev, V. (1991) Unusual conformation of (dA)n.(dT)n-tracts as revealed by cyclobutane thymine-thymine dimer formation, Nucleic Acids Res., 19, 4491-4496.
34. [34] Protic, M. and Levine, A.S. (1993) Detection of DNA damage-recognition proteins using the band-shift assay and Southwestern hybridization, Electrophoresis, 14, 682-692.
35. [35] Pearlman, D.A., Holbrook, S.R., Pirkle, D.H. and Kim, S.-H. (1985) Molecular models for DNA damaged by photoreaction, Science, 227, 1304-1308.
36. [36] Husain, I., Griffith, J. and Sancar, A, (1988) Thymine dimers bend DNA, Proc. Natl. Acad. Sci. USA, 85, 2558-2562.
37. [37] Anderson, J.N. (1986) Detection, sequence patterns and function of unusual DNA structures, Nucleic Acids Res.,, 14, 8513-8533.
38. [38] Bode, J., Kohwi, Y., Dickinson, L., Job, T., Klehr, D., Mielke, C. and Kohwi-Shigematsu, T. (1992) Biological significance of unwinding capability of nuclear matrix-associating DNAs, Science, 255, 195-197.
39. [39] Pil, P.M. and Lippard, S.J. (1992) Specific binding of chromosomal protein HMG1 to DNA damaged by the anticancer drug cisplatin, Science, 256, 234-237.
40. [40] Treiber, D.K., Zhai, X., Jantzeru H.-M. and Essigmann, J.M. (1994) Cisplatin-DNA adducts are molecular decoys for the ribosomal RNA transcription factor hUBF (human upstream binding factor), Proc. Natl. Acad. Sci. USA, 91, 5672-5676.
41. [41] Ivanchenko, M. and Avramova, Z. (1992) Interaction of MAR-sequences with nuclear matrix proteins, J. Cell Biol.,, 50, 190-200.
42. [42] MacLeod, M.C. (1996) A possible role in chemical carcinogenesis for epigenetic, heritable changes in gene expression, Mol. Carcinogenesis, 15, 241-250