Rapid direct determination of HLA-DQB1 * 0301 in the whole blood of normal individuals and cancer patients by specific polymerase chain reaction amplification

Journal of Immunological Methods

Volumn 199, Issue 1, 1996, Pages 61-68

  Lu, Meisheng ^a   Thompson, William A ^a   Lawlor, David A ^a   Reveille, John D ^b   Lee, Jeffrey E ^a  

^a UNIVERSITY OF TEXAS MD ANDERSON CANCER CENTER   (United States)

^b UNIVERSITY OF TEXAS   (United States)

Author keywords

HLA DQ antigen; Major histocompatibility class II gene; Melanoma; Polymerase chain reaction

Indexed keywords

HLA DQ ANTIGEN;

ARTICLE; CONTROLLED STUDY; HLA SYSTEM; HUMAN; MAJOR CLINICAL STUDY; MELANOMA; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL;

BASE SEQUENCE; HEALTH STATUS; HLA-DQ ANTIGENS; MELANOMA; MOLECULAR SEQUENCE DATA; NUCLEIC ACID AMPLIFICATION TECHNIQUES; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SKIN NEOPLASMS;

EID: 0030606235     PISSN: 00221759     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0022-1759(96)00167-6     Document Type: Article

References (26)

1. Ahmed, A.R., Foster, S., Zaltas, M., Notani, G., Awdeh, A., Alper, C. and Yunis, E.J. (1991) Association of DQw7 (DQB1 * 0301) with ocular cicatricial pemphigoid. Proc. Natl. Acad. Sci. USA 88, 11579-11582.
2. Bidwell, J.L., Bidwell, E.A., Savage, D.A., Middleton, D., Klonda, P.T. and Bradley, B.A. (1988) A DNA-RFLP typing system that positively identifies serologically well-defined and ill-defined HLA-DR and DQ alleles, including DRw10. Transplantation 45, 640-646.
3. Bunce, M., Taylor, C.J. and Welsh, K.I. (1993) Rapid HLA-DQB typing by eight polymerase chain reaction amplifications with sequence-specific primers (PCR-SSP). Hum. Immunol. 37, 201-206.
4. Buyse, I., Decarte, R., Baens, M., Cuppens, H., Semana, G., Emonds, M.P., Marynen, P. and Cassiman, J.J. (1993) Rapid DNA typing of class II HLA antigens using the polymerase chain reaction and reverse dot blot hybridization. Tissue Antigens 41, 1-14.
5. Dyer, P.A. and Martin, S. (1991) Techniques used to define human MHC antigens: serology. Immunol. Lett. 29, 15-22.
6. Fastenstein, H. and Ollier, B. (1987) Cellular typing and functional heterogeneity of MHC-encoded products. Br. Med. Bull. 43, 122-155.
7. Fernandez-Viña, M.A., Gao, X., Moraea, M.E., Moraes, J.R., Salateil, I., Miller, S., Tsai, J., Sun, Y., An, J., Layrisse, Z., Gazit, E., Brautbar, C. and Stastny, P. (1991) Alleles at four HLA class II loci determined by oligonucleotide hybridization and their associations in five ethnic groups. Immunogenetics 34, 299-312.
8. Khalil, I., Lepage, V., Douay, C., Morin, L., Al-Daccak, R., Wallach, D.Binet, O., Lemarchand, F., Degos, L. and Hors, J. (1991) HLA DQB1 * 0301 allele is involved in the susceptibility to erythema multiforme. J. Invest. Dermatol. 97, 697-700.
9. Herrera, M., Theiler, G., Augustovski, F., Chertkoff, L., Fainboim, L., DeRosa, S., Cowan, E.P. and Satz, M.L. (1994) Molecular characterization of HLA class II genes in celiac disease patients of Latin American Caucasian origin. Tissue Antigens 43, 83-87.
10. Lanchbury, J.S.S., Sakkas, L.I., March, S.G.E., Bodmer, J.G., Welsh, K.I. and Panayi, G.S. (1989) HLA-DQ beta 3.1 allele is a determinant of susceptibility to DR4-associated rheumatoid arthritis. Hum. Immunol. 26, 59-71.
11. Lee, J.E., Reveille, J.D., Ross, M.I. and Platsoucas, C.D. (1994) HLA DQB1 * 0301 associated with increased melanoma risk. Int. J. Cancer 59, 510-513.
12. Lee, J.E., Loflin, P.T., Laud, P.R., Lu, M., Reveille, J.D. and Lawlor, D.A. (1996a) The human leukocyte antigen TAP2 gene defines the centromeric limit of melanoma susceptibility on chromosome 6p. Tissue Antigens 47, 117-121.
13. Lee, J.E., Lu, M., Mansfield, P.F., Platsoucas, C.D., Reveille, J.D. and Ross, M.I. (1996b) Malignant melanoma: Relationship of the human leukocyte antigen class II gene DQB1 * 0301 to disease recurrence in American Joint Committee on Cancer stage I or II. Cancer, 78, 758-763.
14. Lee, J.E., Lowy, A.M., Thompson, W.A., Lu, M., Loflin, P.T, Skibber, J.M., Evans, D.B., Curley, S.A., Mansfield, P.F. and Reveille, J.D. (1996c) Association of gastric adenocarcinoma with the human leukocyte antigen Class II gene DQB1 * 0301. Gastroenterology, 111, 426-432.
15. Lo, Y., Mehal, W.Z. and Wordsworth, B.P. (1991) HLA typing by double ARMS. Lancet 338, 65-66.
16. Marsh, S.G.E. and Bodmer, J.G. (1995) HLA class II region nucleotide sequences, 1995. Tissue Antigens 45, 258-280.
17. Newton, C.R., Graham, A., Heptinstall, L.E., Pawell, S.J., Summers, C., Kalsheker, N., Smith, J.C. and Markham, A.F. (1989) Analysis of any point mutation in DNA: the amplification refractory mutation system (ARMS). Nucleic Acids Res. 17, 2503.
18. Olerup, O., Aldener, A. and Fogdell, A. (1993) HLA-DQB1 and -DQA1 typing by PCR amplification with sequence-specific primers (PCR-SSP) in 2 hours. Tissue Antigens 41, 119-134.
19. Panaccio, M. and Lew, A.M. (1994) Direct PCR from whole blood using formamide and low temperatures. In: PCR Technology: Current Innovations. CRC Press, Boca Raton, FL, pp. 151-157.
20. Picard, J.K. (1993) Single-step allele-specific polymerase chain reaction HLA-DQ genotyping using ARMS primers. Hum. Immunol. 38, 115-122.
21. Reveille, J.D., Durban, E., MacLeod-St.Clair, M.J., Goldstein, R., Moreda, R., Altman, R.D. and Arnett, F.C. (1992) Association of amino acid sequences in the HLA-DQB1 first domain with the antitopoisomerase I autoantibody response in scleroderma (progressive systemis sclerosis). J. Clin. Invest. 90, 973-980.
22. Salazar, M., Deulofeut, R., Tunis, J.J., Bing, D.H. and Yunis, E.J. (1993) A fast PCR-SSP method for HLA-DQ generic typing. Tissue Antigens 41, 102-106.
23. Simons, M. and Mervart, H. (1992) HLA in non-European Caucasoids. In: K. Tsuji, M. Aizawa, and Sasazuki, T. (Eds.), HLA 1991: Proceedings of the Eleventh International Histocompatibility Workshop and Conference, Vol. 1. Oxford University Press, Oxford, pp. 660-662.
24. Uno, H., Kawano, K., Matsuoka, H. and Tsuda, K. (1988) HLA and adult T cell leukaemia: HLA-linked genes controlling susceptibility to human T cell leukaemia virus type I. Clin. Exp. Immunol. 71, 211-16.
25. Wank, R. and Schendel, D.J. (1992) HLA antigens and cervical carcinoma [letter]. Nature 356, 22-23.
26. Welsh, E.A., Clark, H.H., Epstein, S.Z., Reveille, J.D. and Duvic, M. (1994) Human leukocyte antigen-DQB1 * 0301 alleles are associated with alopecia areata. J. Invest. Dermatol. 103, 758-763.