-
1
-
-
0028343504
-
Determinants of affinity and mode of DNA binding at the carboxy terminus of the bacteriophage SPo1-encoded type II DNA-binding protein, TF1
-
Andera, L. & Geiduschek, E. P. (1994). Determinants of affinity and mode of DNA binding at the carboxy terminus of the bacteriophage SPO1-encoded type II DNA-binding protein, TF1. J. Bacteriol. 176, 1364-1373.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1364-1373
-
-
Andera, L.1
Geiduschek, E.P.2
-
2
-
-
0028574207
-
An analysis of subunit exchange in the dimeric DNA-binding and DNA-bending protein, TF1
-
Andera, L., Schneider, G. J. & Geiduschek, E. P. (1994a). An analysis of subunit exchange in the dimeric DNA-binding and DNA-bending protein, TF1. Biochimie, 76, 933-940.
-
(1994)
Biochimie
, vol.76
, pp. 933-940
-
-
Andera, L.1
Schneider, G.J.2
Geiduschek, E.P.3
-
3
-
-
0009520268
-
Interrelations of secondary structure stability and DNA-binding affinity in the bacteriophage SPO1-encoded type II DNA-binding protein TF1
-
Andera, L., Spangler, C. J., Galeone, A., Mayol, L. & Geiduschek, E. P. (1994b). Interrelations of secondary structure stability and DNA-binding affinity in the bacteriophage SPO1-encoded type II DNA-binding protein TF1. J. Mol. Biol. 236, 139-150.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 139-150
-
-
Andera, L.1
Spangler, C.J.2
Galeone, A.3
Mayol, L.4
Geiduschek, E.P.5
-
4
-
-
0024278714
-
Helix geometry in proteins
-
Barlow, D. J. & Thornton, J. M. (1988). Helix geometry in proteins. J. Mol. Biol. 201, 601-619.
-
(1988)
J. Mol. Biol.
, vol.201
, pp. 601-619
-
-
Barlow, D.J.1
Thornton, J.M.2
-
6
-
-
0023662806
-
A comparison of the restrained molecular dynamics and distance geometry methods for determining three-dimensional structures of proteins on the basis of interproton distance constraints
-
Clore, G. M., Nilges, M., Brünger, A. T., Karplus, M. & Gronenborn, A. M. (1987). A comparison of the restrained molecular dynamics and distance geometry methods for determining three-dimensional structures of proteins on the basis of interproton distance constraints. FEBS Letters, 213, 269-277.
-
(1987)
FEBS Letters
, vol.213
, pp. 269-277
-
-
Clore, G.M.1
Nilges, M.2
Brünger, A.T.3
Karplus, M.4
Gronenborn, A.M.5
-
7
-
-
0021710080
-
E. Coli integration host factor binds to specific sites in DNA
-
Craig, N. L. & Nash, H. A. (1984). E. coli integration host factor binds to specific sites in DNA. Cell, 39, 707-716.
-
(1984)
Cell
, vol.39
, pp. 707-716
-
-
Craig, N.L.1
Nash, H.A.2
-
8
-
-
0023769808
-
Structure and energetics of ligand binding to proteins: Escherichia coli dihydrofolate reductase-trimethoprim, a drug-receptor system
-
Dauber-Osguthorpe, P., Roberts, V. A., Osguthorpe, D. J., Wolff, J., Genest, M. & Hagler, A. T. (1988). Structure and energetics of ligand binding to proteins: Escherichia coli dihydrofolate reductase-trimethoprim, a drug-receptor system. Proteins: Struct. Funct. Genet. 4, 31047.
-
(1988)
Proteins: Struct. Funct. Genet.
, vol.4
, pp. 31047
-
-
Dauber-Osguthorpe, P.1
Roberts, V.A.2
Osguthorpe, D.J.3
Wolff, J.4
Genest, M.5
Hagler, A.T.6
-
9
-
-
0023413620
-
Histone-like proteins of bacteria
-
Drlica, K. & Rouvière-Yaniv, J. (1987). Histone-like proteins of bacteria. Microbiol. Rev. 51, 301-319.
-
(1987)
Microbiol. Rev.
, vol.51
, pp. 301-319
-
-
Drlica, K.1
Rouvière-Yaniv, J.2
-
10
-
-
0000711201
-
Overcoming the ambiguity problem encountered in the analysis of nuclear overhauser magnetic resonance spectra of symmetric dimer proteins
-
Folkers, P. J. M., Folmer, R. H. A., Konings, R. N. H. & Hilbers, C. W. (1993). Overcoming the ambiguity problem encountered in the analysis of nuclear overhauser magnetic resonance spectra of symmetric dimer proteins. J. Am. Chem. Soc. 115, 3798-3799.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 3798-3799
-
-
Folkers, P.J.M.1
Folmer, R.H.A.2
Konings, R.N.H.3
Hilbers, C.W.4
-
11
-
-
0025909444
-
High-resolution three-dimensional structure of reduced recombinant human thioredoxin in solution
-
Forman-Kay, J. D., Clore, G. M., Wingfield, P. T. & Gronenborn, A. M. (1991). High-resolution three-dimensional structure of reduced recombinant human thioredoxin in solution. Biochemistry, 30, 2685-2698.
-
(1991)
Biochemistry
, vol.30
, pp. 2685-2698
-
-
Forman-Kay, J.D.1
Clore, G.M.2
Wingfield, P.T.3
Gronenborn, A.M.4
-
12
-
-
0025675964
-
TF1, a bacteriophage-specific DNA binding and DNA-bending protein
-
Geiduschek, E. P., Schneider, G. J. & Sayre, M. H. (1990). TF1, a bacteriophage-specific DNA binding and DNA-bending protein. J. Struct. Biol. 104, 84-90.
-
(1990)
J. Struct. Biol.
, vol.104
, pp. 84-90
-
-
Geiduschek, E.P.1
Schneider, G.J.2
Sayre, M.H.3
-
13
-
-
0027370073
-
Characterization of a set of integration host factor mutants deficient for DNA binding
-
Granston, A. E. & Nash, H. A. (1993). Characterization of a set of integration host factor mutants deficient for DNA binding. J. Mol. Biol. 234, 45-59.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 45-59
-
-
Granston, A.E.1
Nash, H.A.2
-
14
-
-
0022065259
-
Site-specific DNA binding by the bacteriophage SPO1-encoded type II DNA-binding protein
-
Greene, J. R. & Geiduschek, E. P. (1985). Site-specific DNA binding by the bacteriophage SPO1-encoded type II DNA-binding protein. EMBO J. 4, 1345-1349.
-
(1985)
EMBO J.
, vol.4
, pp. 1345-1349
-
-
Greene, J.R.1
Geiduschek, E.P.2
-
15
-
-
0030581143
-
On the connection between inherent DNA flexure and preferred binding of hydroxymethyluracil-containing DNA by the type II DNA-binding protein TF1
-
Grove, A., Galeone, A., Mayol, L. & Geiduschek, E. P. (1996). On the connection between inherent DNA flexure and preferred binding of hydroxymethyluracil-containing DNA by the type II DNA-binding protein TF1. J. Mol. Biol. 206(2), 196-206.
-
(1996)
J. Mol. Biol.
, vol.206
, Issue.2
, pp. 196-206
-
-
Grove, A.1
Galeone, A.2
Mayol, L.3
Geiduschek, E.P.4
-
16
-
-
0024508994
-
Fluorescence studies of a single tyrosine in a type II DNA binding protein
-
Härd T., Hsu, V. L., Geiduschek, E. P., Appelt, K. & Kearns, D. R. (1989a). Fluorescence studies of a single tyrosine in a type II DNA binding protein. Biochemistry, 28, 396-406.
-
(1989)
Biochemistry
, vol.28
, pp. 396-406
-
-
Härd, T.1
Hsu, V.L.2
Geiduschek, E.P.3
Appelt, K.4
Kearns, D.R.5
-
17
-
-
0024539550
-
A type II DNA-binding protein genetically engineered for fluorescence spectroscopy: The "arm" of transcription factor 1 binds in the DNA grooves
-
Härd T., Sayre, M. H., Geiduschek, E. P. & Kearns, D. R. (1989b). A type II DNA-binding protein genetically engineered for fluorescence spectroscopy: the "arm" of transcription factor 1 binds in the DNA grooves. Biochemistry, 28, 2813-2819.
-
(1989)
Biochemistry
, vol.28
, pp. 2813-2819
-
-
Härd, T.1
Sayre, M.H.2
Geiduschek, E.P.3
Kearns, D.R.4
-
18
-
-
0028000411
-
Proton and nitrogen NMR sequence-specific assignments and secondary structure determination of the Bacillus subtilis SPO1-encoded transcription factor 1
-
Jia, X., Reisman, M. J., Hsu, V. L., Geiduschek, E. P., Parello, J. & Kearns, D. R. (1994). Proton and nitrogen NMR sequence-specific assignments and secondary structure determination of the Bacillus subtilis SPO1-encoded transcription factor 1. Biochemistry, 33, 8842-8852.
-
(1994)
Biochemistry
, vol.33
, pp. 8842-8852
-
-
Jia, X.1
Reisman, M.J.2
Hsu, V.L.3
Geiduschek, E.P.4
Parello, J.5
Kearns, D.R.6
-
19
-
-
0017349150
-
Specificity of the weak binding between the phage SPO1 transcription-inhibitory protein, TF1, and SPO1 DNA
-
Johnson, G. G. & Geiduschek, E. P. (1977). Specificity of the weak binding between the phage SPO1 transcription-inhibitory protein, TF1, and SPO1 DNA. Biochemistry, 16, 1473-1485.
-
(1977)
Biochemistry
, vol.16
, pp. 1473-1485
-
-
Johnson, G.G.1
Geiduschek, E.P.2
-
20
-
-
45149137348
-
αH coupling constants in N-labeled proteins
-
αH coupling constants in N-labeled proteins. J. Magn. Reson. 86, 110-126.
-
(1990)
J. Magn. Reson.
, vol.86
, pp. 110-126
-
-
Kay, L.1
Bax, A.2
-
21
-
-
0027483012
-
Co-crystal structure of TBP recognizing the minor groove of a TATA element
-
Kirn, J. L., Nikolov, D. B. & Burley, S. K. (1993). Co-crystal structure of TBP recognizing the minor groove of a TATA element. Nature, 365, 520-527.
-
(1993)
Nature
, vol.365
, pp. 520-527
-
-
Kirn, J.L.1
Nikolov, D.B.2
Burley, S.K.3
-
22
-
-
0027504913
-
Crystal structure of a yeast TBP/TATA-box complex
-
Kim, Y., Geiger, J. H., Hahn, S. & Sigler, P. B. (1993). Crystal structure of a yeast TBP/TATA-box complex. Nature, 365, 512-520.
-
(1993)
Nature
, vol.365
, pp. 512-520
-
-
Kim, Y.1
Geiger, J.H.2
Hahn, S.3
Sigler, P.B.4
-
24
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
Laskowski, R. A., McArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallg. 26, 283-291.
-
(1993)
J. Appl. Crystallg.
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
McArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
25
-
-
0027327311
-
Genetic and biochemical analysis of the integration host factor of Escherichia coli
-
Mengeritsky, G., Goldenberg, D., Mendelson, I., Giladi, H. & Oppenheim, A. B. (1993). Genetic and biochemical analysis of the integration host factor of Escherichia coli. J. Mol. Biol. 321, 646-657.
-
(1993)
J. Mol. Biol.
, vol.321
, pp. 646-657
-
-
Mengeritsky, G.1
Goldenberg, D.2
Mendelson, I.3
Giladi, H.4
Oppenheim, A.B.5
-
26
-
-
0026655361
-
Stereochemical quality of protein structure coordinates
-
Morris, A. L., McArthur, M. W., Hutchinson, E. G. & Thornton, J. M. (1992). Stereochemical quality of protein structure coordinates. Proteins: Struct. Funct. Genet. 12, 345-364.
-
(1992)
Proteins: Struct. Funct. Genet.
, vol.12
, pp. 345-364
-
-
Morris, A.L.1
McArthur, M.W.2
Hutchinson, E.G.3
Thornton, J.M.4
-
27
-
-
84986486656
-
A rapid finite difference algorithm, utilizing successive over-relaxation to solve the Poisson-Boltzmann equation
-
Nicholls, A. & Honig, B. (1991). A rapid finite difference algorithm, utilizing successive over-relaxation to solve the Poisson-Boltzmann equation. J. Comp. Chem. 12, 435-445.
-
(1991)
J. Comp. Chem.
, vol.12
, pp. 435-445
-
-
Nicholls, A.1
Honig, B.2
-
28
-
-
0026319199
-
-
Nicholls, A., Sharp, K. & Honig, B. (1991). Proteins: Struct. Funct. Genet. 11, 281-289.
-
(1991)
Proteins: Struct. Funct. Genet.
, vol.11
, pp. 281-289
-
-
Nicholls, A.1
Sharp, K.2
Honig, B.3
-
29
-
-
45249131217
-
Extended heteronuclear editing of 2D NMR spectra of isotope-labeled proteins, using the X(w1, w2) double half filter
-
Otting, G. & Wüthrich, K. (1989). Extended heteronuclear editing of 2D NMR spectra of isotope-labeled proteins, using the X(w1, w2) double half filter. J. Magn. Reson. 85, 586-594.
-
(1989)
J. Magn. Reson.
, vol.85
, pp. 586-594
-
-
Otting, G.1
Wüthrich, K.2
-
30
-
-
0011948054
-
Comparison of the NMR solution structure of cyclosporin A determined by different techniques
-
Pachter, R., Altman, R. B., Czaplicki, J. & Jardetzky, O. (1991). Comparison of the NMR solution structure of cyclosporin A determined by different techniques. J. Magn. Res. 92, 468-479.
-
(1991)
J. Magn. Res.
, vol.92
, pp. 468-479
-
-
Pachter, R.1
Altman, R.B.2
Czaplicki, J.3
Jardetzky, O.4
-
31
-
-
0024293557
-
Two-dimensional 1H nuclear magnetic resonance study of pike pI 5.0 parvalbumin (Esox lucius): Sequential resonance assignments and folding of the polypeptide chain
-
Padilla, A., Cavé, A. & Parello, J. (1988). Two-dimensional 1H nuclear magnetic resonance study of pike pI 5.0 parvalbumin (Esox lucius): sequential resonance assignments and folding of the polypeptide chain. J. Mol. Biol. 204, 995-1017.
-
(1988)
J. Mol. Biol.
, vol.204
, pp. 995-1017
-
-
Padilla, A.1
Cavé, A.2
Parello, J.3
-
32
-
-
0023682629
-
Histone-like proteins and bacterial chromosome structure
-
Pettijohn, D. E. (1988). Histone-like proteins and bacterial chromosome structure. J. Biol. Chem. 263, 12793-12796.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 12793-12796
-
-
Pettijohn, D.E.1
-
34
-
-
0027335770
-
2H-labeling
-
2H-labeling. Eur. J. Biochem. 213, 865-873.
-
(1993)
Eur. J. Biochem.
, vol.213
, pp. 865-873
-
-
Reisman, M.J.1
Hsu, V.L.2
Jariel-Encontre, I.3
Lecou, C.4
Sayre, M.H.5
Kearns, D.R.6
Parello, J.7
-
35
-
-
0023820681
-
TF1, the bacteriophage SPO1-encoded type II DNA-binding protein, is essential for viral multiplication
-
Sayre, M. H. & Geiduschek, E. P. (1988). TF1, the bacteriophage SPO1-encoded type II DNA-binding protein, is essential for viral multiplication. J. Virol. 62, 3455-3462.
-
(1988)
J. Virol.
, vol.62
, pp. 3455-3462
-
-
Sayre, M.H.1
Geiduschek, E.P.2
-
36
-
-
0025607896
-
Effects of mutations at amino acid 61 in the arm of TF1 on its DNA-binding properties
-
Sayre, M. H. & Geiduschek, E. P. (1990). Effects of mutations at amino acid 61 in the arm of TF1 on its DNA-binding properties. J. Mol. Biol. 216, 819-833.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 819-833
-
-
Sayre, M.H.1
Geiduschek, E.P.2
-
37
-
-
0021286693
-
3-Å resolution structure of a protein with histone-like properties in prokaryotes
-
Tanaka, I., Appelt, K., Dijk, J., White S. W. & Wilson, K. S. (1984). 3-Å resolution structure of a protein with histone-like properties in prokaryotes. Nature, 310, 376-381.
-
(1984)
Nature
, vol.310
, pp. 376-381
-
-
Tanaka, I.1
Appelt, K.2
Dijk, J.3
White, S.W.4
Wilson, K.S.5
-
38
-
-
0028670214
-
15N resonance assignments and secondary structure analysis of the HU protein from Bacillus stearothermopuilus using two- and three-dimensional double- and triple-resonance heteronuclear magnetic resonance spectroscopy
-
15N resonance assignments and secondary structure analysis of the HU protein from Bacillus stearothermopuilus using two- and three-dimensional double- and triple-resonance heteronuclear magnetic resonance spectroscopy. Biochemistry, 33, 14858-14870.
-
(1994)
Biochemistry
, vol.33
, pp. 14858-14870
-
-
Vis, H.1
Boelens, R.2
Mariani, M.3
Stroop, R.4
Vorgias, C.E.5
Wilson, K.S.6
Kaptein, R.7
-
39
-
-
0029585767
-
Solution structure of the hu protein from Bacillus stearothermophilus
-
Vis, H., Mariani, M., Vorgias, C. E., Wilson, K. S., Kaptein, R. & Boelens, R. (1995). Solution structure of the HU protein from Bacillus stearothermophilus. J. Mol. Biol. 254, 692-703.
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 692-703
-
-
Vis, H.1
Mariani, M.2
Vorgias, C.E.3
Wilson, K.S.4
Kaptein, R.5
Boelens, R.6
-
40
-
-
0023645325
-
Protein structure in solution by nuclear magnetic resonance and distance geometry. The polypeptide fold of the basic pancreatic trypsin inhibitor determined using two different algorithms, DISGEO and DISMAN
-
Wagner, G., Braun, W., Havel, T. F., Schauman, T., Go, N. & Wüthrich, K. (1987). Protein structure in solution by nuclear magnetic resonance and distance geometry. The polypeptide fold of the basic pancreatic trypsin inhibitor determined using two different algorithms, DISGEO and DISMAN. J. Mol. Biol. 196, 611-639.
-
(1987)
J. Mol. Biol.
, vol.196
, pp. 611-639
-
-
Wagner, G.1
Braun, W.2
Havel, T.F.3
Schauman, T.4
Go, N.5
Wüthrich, K.6
-
41
-
-
0024337809
-
A protein structural motif that bends DNA
-
White, S. W. Appelt, K., Wilson, K. S. & Tanaka, I. (1989). A protein structural motif that bends DNA. Proteins: Struct. Funct. Genet. 5, 281-288.
-
(1989)
Proteins: Struct. Funct. Genet.
, vol.5
, pp. 281-288
-
-
White, S.W.1
Appelt, K.2
Wilson, K.S.3
Tanaka, I.4
-
42
-
-
0021095743
-
Pseudo-structure for the 20 common amino acids for use in studies of protein conformations by measurements of intramolecular proton-proton distance constraints with nuclear magnetic resonance
-
Wüthrich, K., Billeter, M. & Braun, W. (1983). Pseudo-structure for the 20 common amino acids for use in studies of protein conformations by measurements of intramolecular proton-proton distance constraints with nuclear magnetic resonance. J. Mol. Biol. 169, 949-961.
-
(1983)
J. Mol. Biol.
, vol.169
, pp. 949-961
-
-
Wüthrich, K.1
Billeter, M.2
Braun, W.3
-
43
-
-
0011917021
-
Sequential simulated annealing: An efficient procedure for structural refinement based on NMR constraints
-
Zhao, D. & Jardetzky, O. (1994). Sequential simulated annealing: an efficient procedure for structural refinement based on NMR constraints. J. Phys. Chem. 97, 3007-3012.
-
(1994)
J. Phys. Chem.
, vol.97
, pp. 3007-3012
-
-
Zhao, D.1
Jardetzky, O.2
-
44
-
-
0027528411
-
Refinement of the solution structures of the E. coli trp holo- and aporepressor
-
Zhao D. Arrowsmith C., Jia X. & Jardetzky, O. (1993). Refinement of the solution structures of the E. coli trp holo- and aporepressor. J. Mol. Biol. 229, 735-746.
-
(1993)
J. Mol. Biol.
, vol.229
, pp. 735-746
-
-
Zhao, D.1
Arrowsmith, C.2
Jia, X.3
Jardetzky, O.4
|