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Volumn 261, Issue 3, 1996, Pages 399-414

Structure and conversion kinetics of a bi-stable DNA i-motif: Broken symmetry in the [d(5mCCTCC)]4 tetramer

Author keywords

DNA solution structure; i motif; Proton exchange; Telomer; Tetramer

Indexed keywords

DOUBLE STRANDED DNA; OLIGOMER; TETRAMER; THYMIDINE;

EID: 0030598964     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1996.0472     Document Type: Article
Times cited : (66)

References (28)
  • 1
    • 5144233105 scopus 로고
    • MLEV-17 based two-dimensional homonuclear magnetization transfer spectroscopy
    • Bax, A. & Davis, D. G. (1985). MLEV-17 based two-dimensional homonuclear magnetization transfer spectroscopy. J. Magn. Reson. 65, 355-360.
    • (1985) J. Magn. Reson. , vol.65 , pp. 355-360
    • Bax, A.1    Davis, D.G.2
  • 2
    • 0013851991 scopus 로고
    • Nuclear magnetic resonance studies of methyl derivatives of cytosine
    • Becker, E. D., Todd Miles, H. & Bradley, R. B. (1965). Nuclear magnetic resonance studies of methyl derivatives of cytosine. J. Am. Chem. Soc. 87, 5575-5582.
    • (1965) J. Am. Chem. Soc. , vol.87 , pp. 5575-5582
    • Becker, E.D.1    Todd Miles, H.2    Bradley, R.B.3
  • 3
    • 0029032852 scopus 로고
    • Extension of the four-stranded intercalated cytosine motif by adenine-adenine base-pairing in the crystal structure of d(cCCAAT)
    • Berger, I., Kang, C., Fredian, A., Ratliff, R., Moyziz, R. & Rich, A. (1995). Extension of the four-stranded intercalated cytosine motif by adenine-adenine base-pairing in the crystal structure of d(CCCAAT). Struct. Biol. 2, 416-425.
    • (1995) Struct. Biol. , vol.2 , pp. 416-425
    • Berger, I.1    Kang, C.2    Fredian, A.3    Ratliff, R.4    Moyziz, R.5    Rich, A.6
  • 5
    • 0014725117 scopus 로고
    • Oligonucleotide interactions. III. Circular dichroism studies of the conformation of deoxyoligonucleotides
    • Cantor, C. R. & Warshaw, M. M. (1970). Oligonucleotide interactions. III. Circular dichroism studies of the conformation of deoxyoligonucleotides. Biopolymers, 9, 1059-1077.
    • (1970) Biopolymers , vol.9 , pp. 1059-1077
    • Cantor, C.R.1    Warshaw, M.M.2
  • 6
    • 0028124986 scopus 로고
    • Crystal structure of a four-stranded intercalated DNA: D(C4)
    • Chen, L., Cai, L., Zhang, X. & Rich, A. (1994). Crystal structure of a four-stranded intercalated DNA: d(C4). Biochemistry, 33, 13540-12546.
    • (1994) Biochemistry , vol.33 , pp. 13540-112546
    • Chen, L.1    Cai, L.2    Zhang, X.3    Rich, A.4
  • 7
    • 0002641301 scopus 로고
    • Strategies for eliminating unwanted cross-relaxation and coherence-transfer effects from two-dimensional chemical-exchange spectra
    • Fejzo, J., Westler, W. M., Macura, S. & Markley, J. L. (1991). Strategies for eliminating unwanted cross-relaxation and coherence-transfer effects from two-dimensional chemical-exchange spectra. J. Magn. Reson. 92, 20-29.
    • (1991) J. Magn. Reson. , vol.92 , pp. 20-29
    • Fejzo, J.1    Westler, W.M.2    Macura, S.3    Markley, J.L.4
  • 8
    • 33846851242 scopus 로고
    • Study of moderately rapid chemical exchange reaction by means of nuclear magnetic double resonance
    • Forsèn, S. & Hoffman, R. A. (1963). Study of moderately rapid chemical exchange reaction by means of nuclear magnetic double resonance. J. Chem. Phys. 39, 2892-2901.
    • (1963) J. Chem. Phys. , vol.39 , pp. 2892-2901
    • Forsèn, S.1    Hoffman, R.A.2
  • 9
    • 0027278767 scopus 로고
    • A tetrameric DNA structure with protonated cytidine-cytidine base pairs
    • Gehring, K., Leroy, J.-L. & Guéron, M. (1993). A tetrameric DNA structure with protonated cytidine-cytidine base pairs. Nature, 363, 561-565.
    • (1993) Nature , vol.363 , pp. 561-565
    • Gehring, K.1    Leroy, J.-L.2    Guéron, M.3
  • 12
    • 0020945346 scopus 로고
    • 15N-labelled nucleic acids via dipolar coupling and chemical shift anisotropy
    • 15N-labelled nucleic acids via dipolar coupling and chemical shift anisotropy. J. Am. Chem. Soc. 105, 7262-7266.
    • (1983) J. Am. Chem. Soc. , vol.105 , pp. 7262-7266
    • Guéron, M.1    Leroy, J.-L.2    Griffey, R.H.3
  • 13
    • 0023256126 scopus 로고
    • A single mode of DNA base-pair opening drives imino proton exchange
    • Guéron, M., Kochoyan, M. & Leroy, J.-L. (1987). A single mode of DNA base-pair opening drives imino proton exchange. Nature, 382, 89-92.
    • (1987) Nature , vol.382 , pp. 89-92
    • Guéron, M.1    Kochoyan, M.2    Leroy, J.-L.3
  • 16
    • 0000290004 scopus 로고
    • Transition of DNA homopolymers
    • Inman, R. B. (1964). Transition of DNA homopolymers. J. Mol. Biol. 9, 624-637.
    • (1964) J. Mol. Biol. , vol.9 , pp. 624-637
    • Inman, R.B.1
  • 18
    • 0029001614 scopus 로고
    • Stable loop in the crystal structure of the intercalated four-stranded cytosine-rich metazoan telomer
    • Kang, C., Berger, I., Lockshin, C., Ratliff, R., Moyzis, R. & Rich, A. (1995). Stable loop in the crystal structure of the intercalated four-stranded cytosine-rich metazoan telomer. Proc. Natl Acad. Sci. USA, 92, 3874-3878.
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 3874-3878
    • Kang, C.1    Berger, I.2    Lockshin, C.3    Ratliff, R.4    Moyzis, R.5    Rich, A.6
  • 19
    • 0001404315 scopus 로고
    • Molecular structure of helical polycytidylic acid
    • Langridge, R. & Rich, A. (1963). Molecular structure of helical polycytidylic acid. Nature, 198, 725-728.
    • (1963) Nature , vol.198 , pp. 725-728
    • Langridge, R.1    Rich, A.2
  • 20
    • 0029643792 scopus 로고
    • Solution structure of the i-motif tetramers of d(TCC), d(Smethy1CCT) and d(T5methy1CC): Novel NOE connection between amino protons and sugar protons
    • Leroy, J.-L. & Guéron, M. (1995). Solution structure of the i-motif tetramers of d(TCC), d(Smethy1CCT) and d(T5methy1CC): novel NOE connection between amino protons and sugar protons. Structure, 3, 101-120.
    • (1995) Structure , vol.3 , pp. 101-120
    • Leroy, J.-L.1    Guéron, M.2
  • 21
    • 0027159426 scopus 로고
    • Acid multimers of oligo-cytidine strands: Stoichiometry, base-pair characterization and proton exchange properties
    • Leroy, J.-L., Gehring, K., Kettani, A. & Guéron, M. (1993). Acid multimers of oligo-cytidine strands: stoichiometry, base-pair characterization and proton exchange properties. Biochemistry, 3, 6019-6031.
    • (1993) Biochemistry , vol.3 , pp. 6019-6031
    • Leroy, J.-L.1    Gehring, K.2    Kettani, A.3    Guéron, M.4
  • 22
    • 0028364089 scopus 로고
    • Intra-molecular folding of a fragment of the cytosine-rich strand of telomeric DNA into an i-motif
    • Leroy, J.-L., Guéron, M., Mergny, J.-L. & Hélène, C. (1994). Intra-molecular folding of a fragment of the cytosine-rich strand of telomeric DNA into an i-motif. Nucl. Acids Res. 22, 1600-1606.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 1600-1606
    • Leroy, J.-L.1    Guéron, M.2    Mergny, J.-L.3    Hélène, C.4
  • 23
    • 0029082563 scopus 로고
    • Intra-molecular folding of pyrimidine oligodeoxynucleotides into an i-DNA motif
    • Mergny, J.-L., Lacroix, L., Han, X., Leroy, J.-L. & Hélène, C. (1995). Intra-molecular folding of pyrimidine oligodeoxynucleotides into an i-DNA motif. J. Am. Chem. Soc. 117, 8887-8898.
    • (1995) J. Am. Chem. Soc. , vol.117 , pp. 8887-8898
    • Mergny, J.-L.1    Lacroix, L.2    Han, X.3    Leroy, J.-L.4    Hélène, C.5
  • 24
    • 0027383637 scopus 로고
    • A calculation strategy for the structure determination of symmetric dimers by NMR
    • Nilges, M. (1993). A Calculation strategy for the structure determination of symmetric dimers by NMR. Proteins: Struct. Funct. Genet. 17, 297-309.
    • (1993) Proteins: Struct. Funct. Genet. , vol.17 , pp. 297-309
    • Nilges, M.1
  • 25
    • 0029120978 scopus 로고
    • Terminal base pair of oligodeoxynucleotides: Imino proton exchange and fraying
    • Nonin, S., Leroy, J.-L. & Guéron, M. (1995). Terminal base pair of oligodeoxynucleotides: imino proton exchange and fraying. Biochemistry, 34, 10652-10659.
    • (1995) Biochemistry , vol.34 , pp. 10652-10659
    • Nonin, S.1    Leroy, J.-L.2    Guéron, M.3
  • 26
    • 33845555707 scopus 로고
    • Exchangeable proton NMR without base-line distortion, using strong pulse sequences
    • Plateau, P. & Guéron, M. (1982). Exchangeable proton NMR without base-line distortion, using strong pulse sequences. J. Am. Chem. Soc. 104, 7310-7311.
    • (1982) J. Am. Chem. Soc. , vol.104 , pp. 7310-7311
    • Plateau, P.1    Guéron, M.2
  • 27
    • 0016163190 scopus 로고
    • Mononucleotides in aqueous solution: Proton magnetic resonance studies of amino groups
    • Razka, M. (1974). Mononucleotides in aqueous solution: proton magnetic resonance studies of amino groups. Biochemistry, 13, 4616-4622.
    • (1974) Biochemistry , vol.13 , pp. 4616-4622
    • Razka, M.1
  • 28
    • 0027960095 scopus 로고
    • Oligocytodine regions contained in DNA hairpin loops interact via a four-stranded, parallel structure similar to the i-motif
    • Rohozinski, J., Hancock, J. M. & Keniry, M. A. (1994). Oligocytodine regions contained in DNA hairpin loops interact via a four-stranded, parallel structure similar to the i-motif. Nucl. Acids Res. 22, 4653-4659.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 4653-4659
    • Rohozinski, J.1    Hancock, J.M.2    Keniry, M.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.