메뉴 건너뛰기




Volumn 259, Issue 4, 1996, Pages 622-631

Bacteriophage T4 strand transfer protein UvsX tolerates symmetric and asymmetric heterologies in short double-stranded oligonucleotides

Author keywords

Heterology; Oligonucleotides; RecA; Strand transfer; UvsX

Indexed keywords

DOUBLE STRANDED DNA; OLIGONUCLEOTIDE; RECA PROTEIN; SINGLE STRANDED DNA; VIRUS PROTEIN;

EID: 0030596494     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1996.0344     Document Type: Article
Times cited : (4)

References (36)
  • 1
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M. M. (1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72, 248-254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 2
    • 0015823973 scopus 로고
    • Recombination deficient mutants of E. coli and other bacteria
    • Clark, A. J. (1973). Recombination deficient mutants of E. coli and other bacteria. Annu. Rev. Genet. 7, 67-86.
    • (1973) Annu. Rev. Genet. , vol.7 , pp. 67-86
    • Clark, A.J.1
  • 3
    • 0023069449 scopus 로고
    • Enzymes of general recombination
    • Cox, M. M. (1987). Enzymes of general recombination. Annu. Rev. Biochem. 56, 229-262.
    • (1987) Annu. Rev. Biochem. , vol.56 , pp. 229-262
    • Cox, M.M.1
  • 4
    • 0020684649 scopus 로고
    • Early intermediates in bacteriophage T4 DNA replication and recombination
    • Dannenberg, R. & Mosig, G. (1983). Early intermediates in bacteriophage T4 DNA replication and recombination. J. Virol. 45, 813-831.
    • (1983) J. Virol. , vol.45 , pp. 813-831
    • Dannenberg, R.1    Mosig, G.2
  • 5
    • 0023663569 scopus 로고
    • The anomalous gel migration of a stable cruciform: Temperature and salt dependence, and some comparisons with curved DNA
    • Diekmann, S. & Lilley, D. M. (1987). The anomalous gel migration of a stable cruciform: temperature and salt dependence, and some comparisons with curved DNA. Nucl. Acids Res. 15, 5765-5774.
    • (1987) Nucl. Acids Res. , vol.15 , pp. 5765-5774
    • Diekmann, S.1    Lilley, D.M.2
  • 6
    • 0023008741 scopus 로고
    • Structure of helical RecA-DNA complexes. Complexes formed in the presence of ATPγS or ATP
    • Egelman, E. H. & Stasiak, A. (1986). Structure of helical RecA-DNA complexes. Complexes formed in the presence of ATPγS or ATP. J. Mol. Biol. 191, 677-697.
    • (1986) J. Mol. Biol. , vol.191 , pp. 677-697
    • Egelman, E.H.1    Stasiak, A.2
  • 7
    • 0020123634 scopus 로고
    • Visualization of recA protein and its association with DNA: A priming effect of single-strand-binding protein
    • Flory, J. & Radding, C. M. (1982). Visualization of recA protein and its association with DNA: a priming effect of single-strand-binding protein. Cell, 28, 747-756.
    • (1982) Cell , vol.28 , pp. 747-756
    • Flory, J.1    Radding, C.M.2
  • 8
    • 0023026267 scopus 로고
    • Purification and characterization of the T4 bacteriophage uvsX protein
    • Formosa, T. & Alberts, B. M. (1986a). Purification and characterization of the T4 bacteriophage uvsX protein. J. Biol. Chem. 261, 6107-6118.
    • (1986) J. Biol. Chem. , vol.261 , pp. 6107-6118
    • Formosa, T.1    Alberts, B.M.2
  • 9
    • 0022902536 scopus 로고
    • DNA synthesis dependent on genetic recombination: Characterization of a reaction catalyzed by purified bacteriophage T4 proteins
    • Formosa, T. & Alberts, B. M. (1986b). DNA synthesis dependent on genetic recombination: characterization of a reaction catalyzed by purified bacteriophage T4 proteins. Cell, 47, 793-806.
    • (1986) Cell , vol.47 , pp. 793-806
    • Formosa, T.1    Alberts, B.M.2
  • 10
    • 0022432509 scopus 로고
    • Sequence of the T4 recombination gene, uvsX, and its comparison with that of the recA gene of Escherichia coli
    • Fujisawa, H., Yonesaki, T. Minagawa, T. (1985). Sequence of the T4 recombination gene, uvsX, and its comparison with that of the recA gene of Escherichia coli. Nucl. Acids Res. 13, 7473-7481.
    • (1985) Nucl. Acids Res. , vol.13 , pp. 7473-7481
    • Fujisawa, H.1    Yonesaki, T.2    Minagawa, T.3
  • 11
    • 0021954057 scopus 로고
    • The uvsX protein of bacteriophage T4 arranges single-stranded and double-stranded DNA into similar helical nucleoprotein filaments
    • Griffith, J. D. & Formosa, T. (1985). The uvsX protein of bacteriophage T4 arranges single-stranded and double-stranded DNA into similar helical nucleoprotein filaments. J. Biol. Chem. 260, 4484-4491.
    • (1985) J. Biol. Chem. , vol.260 , pp. 4484-4491
    • Griffith, J.D.1    Formosa, T.2
  • 13
    • 0024296726 scopus 로고
    • RecA-mediated strand exchange reactions between duplex DNA molecules containing damaged bases, deletions, and insertions
    • Hahn, T.-R., West, S. & Howard-Flanders, P. (1988). RecA-mediated strand exchange reactions between duplex DNA molecules containing damaged bases, deletions, and insertions. J. Biol. Chem. 263, 7431-7436.
    • (1988) J. Biol. Chem. , vol.263 , pp. 7431-7436
    • Hahn, T.-R.1    West, S.2    Howard-Flanders, P.3
  • 14
    • 0023645090 scopus 로고
    • Visualization of the homologous pairing of DNA catalyzed by the bacteriophage T4 uvsX protein
    • Harris, L. D. & Griffith, J. (1987). Visualization of the homologous pairing of DNA catalyzed by the bacteriophage T4 UvsX protein. J. Biol. Chem. 262, 9285-9292.
    • (1987) J. Biol. Chem. , vol.262 , pp. 9285-9292
    • Harris, L.D.1    Griffith, J.2
  • 15
    • 0022973890 scopus 로고
    • Cloning of the bacteriophage T4 uvsX gene and purification and characterization of the T4 uvsX recombination protein
    • Hinton, D. M. & Nossal, N. G. (1986). Cloning of the bacteriophage T4 uvsX gene and purification and characterization of the T4 uvsX recombination protein. J. Biol. Chem. 261, 5663-5673.
    • (1986) J. Biol. Chem. , vol.261 , pp. 5663-5673
    • Hinton, D.M.1    Nossal, N.G.2
  • 16
    • 84959678845 scopus 로고
    • A mechanism for gene conversion in fungi
    • Holliday, R. (1964). A mechanism for gene conversion in fungi. Genet. Res. 5, 282-304.
    • (1964) Genet. Res. , vol.5 , pp. 282-304
    • Holliday, R.1
  • 17
    • 0021337860 scopus 로고
    • Role of RecA protein spiral filaments in genetic recombination
    • Howard-Flanders, P., West, S. C. & Stasiak, A. (1984). Role of RecA protein spiral filaments in genetic recombination. Nature, 309, 215-220.
    • (1984) Nature , vol.309 , pp. 215-220
    • Howard-Flanders, P.1    West, S.C.2    Stasiak, A.3
  • 18
    • 0027049704 scopus 로고
    • Torsional stress generated by RecA protein during DNA strand exchange separates strands of a heterologous insert
    • Jwang, B. & Radding, C. M. (1992). Torsional stress generated by RecA protein during DNA strand exchange separates strands of a heterologous insert. Proc. Natl Acad. Sci. USA, 89, 7596-7600.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 7596-7600
    • Jwang, B.1    Radding, C.M.2
  • 19
    • 0025610719 scopus 로고
    • The role of the bacteriophage T4 gene 32 protein in homologous pairing
    • Kodadek, T. (1990). The role of the bacteriophage T4 gene 32 protein in homologous pairing. J. Biol. Chem. 265, 20966-20969.
    • (1990) J. Biol. Chem. , vol.265 , pp. 20966-20969
    • Kodadek, T.1
  • 20
    • 0023919927 scopus 로고
    • The mechanism of homologous DNA strand exchange catalyzed by the bacteriophage T4 uvsX and gene 32 proteins
    • Kodadek, T., Wong, M. L. & Alberts, B. M. (1988). The mechanism of homologous DNA strand exchange catalyzed by the bacteriophage T4 uvsX and gene 32 proteins. J. Biol. Chem. 263, 9427-9436.
    • (1988) J. Biol. Chem. , vol.263 , pp. 9427-9436
    • Kodadek, T.1    Wong, M.L.2    Alberts, B.M.3
  • 21
    • 0028308710 scopus 로고
    • Homologous pairing and DNA strand-exchange proteins
    • Kowalczykowski, S. C. & Eggleston, A. K. (1994). Homologous pairing and DNA strand-exchange proteins. Annu. Rev. Biochem. 63, 991-1043.
    • (1994) Annu. Rev. Biochem. , vol.63 , pp. 991-1043
    • Kowalczykowski, S.C.1    Eggleston, A.K.2
  • 22
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 24
    • 0027985084 scopus 로고
    • Effect of length and location of heterologous sequences on RecA-mediated strand exchange
    • Morel, P., Stasiak, A., Ehrlich, S. D. & Cassuto, E. (1994). Effect of length and location of heterologous sequences on RecA-mediated strand exchange. J. Biol. Chem. 269, 19830-19835.
    • (1994) J. Biol. Chem. , vol.269 , pp. 19830-19835
    • Morel, P.1    Stasiak, A.2    Ehrlich, S.D.3    Cassuto, E.4
  • 25
  • 26
    • 0020349256 scopus 로고
    • Homologous pairing and strand exchange in genetic recombination
    • Radding, C. M. (1982). Homologous pairing and strand exchange in genetic recombination. Annu. Rev. Genet. 16, 405-437.
    • (1982) Annu. Rev. Genet. , vol.16 , pp. 405-437
    • Radding, C.M.1
  • 27
    • 0028899302 scopus 로고
    • Homology dependence of uvsX protein-catalyzed joint molecule formation
    • Salinas, F., Jiang, H. & Kodadek, T. (1995). Homology dependence of UvsX protein-catalyzed joint molecule formation. J. Biol. Chem. 270, 5181-5186.
    • (1995) J. Biol. Chem. , vol.270 , pp. 5181-5186
    • Salinas, F.1    Jiang, H.2    Kodadek, T.3
  • 28
    • 0020426110 scopus 로고
    • Determination of the amount of homology required for recombination in bacteriophage T4
    • Singer, B. S., Gold, L., Gauss, P. & Doherty, D. H. (1982). Determination of the amount of homology required for recombination in bacteriophage T4. Cell, 31, 25-33.
    • (1982) Cell , vol.31 , pp. 25-33
    • Singer, B.S.1    Gold, L.2    Gauss, P.3    Doherty, D.H.4
  • 29
    • 0021100339 scopus 로고
    • An unpaired 3′ terminus stimulates RecA protein-promoted DNA-strand exchange
    • Soltis, D. A. & Lehman, I. R. (1983). An unpaired 3′ terminus stimulates RecA protein-promoted DNA-strand exchange. J. Biol. Chem. 258 14073-14075.
    • (1983) J. Biol. Chem. , vol.258 , pp. 14073-14075
    • Soltis, D.A.1    Lehman, I.R.2
  • 30
    • 0021219501 scopus 로고
    • RecA protein-promoted DNA strand exchange. Effect of ionic strength
    • Soltis, D. A. & Lehman, I. R. (1984). RecA protein-promoted DNA strand exchange. Effect of ionic strength. J. Biol. Chem. 259, 12020-12024.
    • (1984) J. Biol. Chem. , vol.259 , pp. 12020-12024
    • Soltis, D.A.1    Lehman, I.R.2
  • 31
    • 0027982665 scopus 로고
    • The holliday junction on its thirtieth anniversary
    • Stahl, F. W. (1994). The Holliday junction on its thirtieth anniversary. Genetics, 138, 241-246.
    • (1994) Genetics , vol.138 , pp. 241-246
    • Stahl, F.W.1
  • 32
    • 0020541955 scopus 로고
    • The double-strand break repair model for recombination
    • Szostak, J. W., Orr-Weaver, T. L., Rothstein, R. J. & Stahl, F. W. (1983). The double-strand break repair model for recombination. Cell, 33, 25-35.
    • (1983) Cell , vol.33 , pp. 25-35
    • Szostak, J.W.1    Orr-Weaver, T.L.2    Rothstein, R.J.3    Stahl, F.W.4
  • 33
    • 0026689684 scopus 로고
    • Enzymes and molecular mechanisms of genetic recombination
    • West, S. C. (1992). Enzymes and molecular mechanisms of genetic recombination. Annu. Rev. Biochem. 61, 603-640.
    • (1992) Annu. Rev. Biochem. , vol.61 , pp. 603-640
    • West, S.C.1
  • 34
    • 0022321539 scopus 로고
    • T4 phage gene uvsX product catalyzes homologous DNA pairing
    • Yonesaki, T. & Minagawa, T. (1985). T4 phage gene uvsX product catalyzes homologous DNA pairing. EMBO J. 4, 3321-3327.
    • (1985) EMBO J. , vol.4 , pp. 3321-3327
    • Yonesaki, T.1    Minagawa, T.2
  • 35
    • 0022048914 scopus 로고
    • Purification and some of the functions of the products of bacteriophage T4 recombination genes, uvsX and uvsY
    • Yonesaki, T., Ryo, Y., Minagawa, T. & Takahashi, H. (1985). Purification and some of the functions of the products of bacteriophage T4 recombination genes, uvsX and uvsY. Eur. J. Biochem. 148, 127-134.
    • (1985) Eur. J. Biochem. , vol.148 , pp. 127-134
    • Yonesaki, T.1    Ryo, Y.2    Minagawa, T.3    Takahashi, H.4
  • 36
    • 0027199391 scopus 로고
    • DNA conformation induced by the bacteriophage T4 uvsX protein appears identical to the conformation induced by the Escherichia coli RecA protein
    • Yu, X. & Egelman, E. H. (1993). DNA conformation induced by the bacteriophage T4 UvsX protein appears identical to the conformation induced by the Escherichia coli RecA protein. J. Mol. Biol. 232, 1-4.
    • (1993) J. Mol. Biol. , vol.232 , pp. 1-4
    • Yu, X.1    Egelman, E.H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.