Fluorescence-based sequencing of double-stranded DNA by hexamer string priming

Analytical Biochemistry

Volumn 241, Issue 2, 1996, Pages 228-237

  Johnson, Arthur F ^a   Lodhi, Muhammad A ^a   McCombie, W Richard ^a  

^a Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA SEQUENCES; FLUORESCENCE;

BASE CALLINGS; DNA SEQUENCING; DOUBLE STRANDED DNA; POTENTIAL UTILITY; RESTRICTION ENZYMES; SEMI-AUTOMATION; SINGLE-STRANDED BINDINGS; SUPERCOILED DNA;

GENE ENCODING;

DOUBLE STRANDED DNA;

ARTICLE; AUTOMATION; DNA DETERMINATION; DNA SEQUENCE; DNA STRUCTURE; FLUORESCENCE; PRIORITY JOURNAL; STRUCTURE ANALYSIS;

EID: 0030588276     PISSN: 00032697     EISSN: None     Source Type: Journal    
DOI: 10.1006/abio.1996.0404     Document Type: Article

References (35)

1. 1. Smith, L. M., and Hood, L. E. (1987) Biotechnology 5, 933-939.
2. 2. Hunkapiller, T., Kaiser, R. J., Koop, B. F., and Hood, L. (1991) Science 254, 59-67.
3. 3. Messing, J., Crea, R., and Seeburg, P. H. (1981) Nucleic Acids Res. 9, 309-321.
4. 4. Anderson, S. (1981) Nucleic Acids Res. 9, 3015-3027.
5. 5. Hong, G. F. (1982) Biosci. Rep. 2, 907-912.
6. 6. Sanchez-Pescador, R., and Urdea, M. S. (1984) DNA 3, 339-343.
7. 7. Brenner, D. G., and Shaw, W. V. (1985) EMBO J. 4, 561-568.
8. 8. Edwards, A., Voss, H., Rice, P., Civitello, A., Stegemann, J., Schwager, C., Zimmermann, J., Erfle, H., Caskey, C. T., and Ansorge, W. (1990) Genomics 6, 593-608.
9. 9. Martin-Gallardo, A., McCombie, W. R., Gocayne, J. D., FitzGerald, M. G., Wallace, S., Lee, B., Lamerdin, J., Trapp, S., Kelley, J. M., Liu, L.-I., Dubnick, M., Dow, L. A., Kerlavage, A. R., de Jong, P., Carrano, A. V., Fields, C., and Venter, J. C. (1992) Nature Genet. 1, 34-39.
10. 10. Sulston, J., Du, Z., Thomas, K., Wilson, R., Hillier, L., Staden, R., Halloran, N., Green, P., Thierry-Mieg, J., Qiu, L., Dear, S., Coulson, A., Craxton, M., Durbin, R., Berks, M., Metzstein, M., Hawkins, T., Ainscough, R., and Waterston, R. (1992) Nature 356, 37-41.
11. 11. Levy, J. (1994) Yeast 10, 1689-1706.
12. 12. McCombie, W. R., and Kieleczawa, J. (1994) Biotechniques 17, 574-579.
13. 13. Studier, F. W. (1989) Proc. Natl. Acad. Sci. USA 86, 6917-6921.
14. 14. Szybalski, W. (1990) Gene 90, 177-178.
15. 15. Siemieniak, D. R., and Slightom, J. L. (1990) Gene 96, 121-124.
16. 16. Kieleczawa, J., Dunn, J. J., and Studier, F. W. (1992) Science 258, 1787-1791.
17. 17. Kotler, L. E., Zevin-Sonkin, D., Sobolev, I. A., Beskin, A. D., and Ulanovsky, L. E. (1993) Proc. Natl. Acad. Sci. USA 90, 4241-4245.
18. 18. Azhikina, T., Veselovskaya, S., Myasnikov, V., Potapov, V., Ermolayeva, O., and Sverdlov, E. (1993) Proc. Natl. Acad. Sci. USA 90, 11460-11462.
19. 19. Hou, W., and Smith, L. M. (1994) Anal. Biochem. 221, 136-141.
20. 20. Kotler, L., Sobolev, I., and Ulanovsky, L. (1994) Biotechniques 17, 554-558.
21. 21. Edwards, A., and Caskey, T. (1991) Methods Companion Methods Enzymol. 3, 41-47.
22. 22. Richards, S., Muzny, D. M., Civitello, D. M., Lu, F., and Gibbs, R. A. (1994) in Automated DNA Sequencing and Analysis (Adams, M. D., Fields, C., and Venter, J. C., Eds.), pp. 191-198, Academic Press, New York.
23. 23. Foglesong, P. D., and Reckord, C. (1992) Biotechniques 13(3), 402-404.
24. 24. Lodhi, M. A., and McCombie, W. R. (1996) Genome Res. 6, 10-18.
25. 25. Yanisch-Perron, C., Vieira, J., and Messing, J. (1985) Gene 33, 103-119.
26. 26. Wisconsin Sequence Analysis Package version 8.0, Genetics Computer Group, University Research Park, Madison, WI.
27. 27. Zuker, M. (1989) Science 244, 48-52.
28. 28. Jaeger, J. A., Turner, D. H., and Zuker, M. (1989) Proc. Natl. Acad. Sci. USA 86, 7706-7710.
29. 29. Short, J. M., Fernandez, J. M., Sorge, J. A., and Huse, W. D. (1988) Nucleic Acids Res. 16, 7583-7600.
30. 30. Balbas, P., Soberon, X., Merino, E., Zurita, M., Lomeli, H., Valle, F., Flores, N., and Bolivar, F. (1986) Gene 50, 3-40.
31. 31. Oka, A., Nomura, N., Morita, M., Sugisaki, H., Sugimoto, K., and Takanami, M. (1979) Mol. Gen. Genet. 172, 151-159.
32. 32. Masukata, H., and Tomizawa, J-i. (1984) Cell 36, 513-522.
33. 33. Chan, P. T., Lebowitz, J., and Bastia, D. (1979) Nucleic Acids Res. 7, 1247-1262.
34. 34. Muesing, M., Tamm, J., Shepard, H. M., and Polisky, B. (1981) Cell 24, 235-242.
35. 35. Novick, R. P. (1987) Microbiol. Rev. 51, 381-395.