A 500-kb physical map and contig from the Harvey ras-1 gene to the 11p telomere

Genomics

Volumn 35, Issue 2, 1996, Pages 353-360

  Russell, Mark W ^a,b   Munroe, David J ^c   Bric, Eva ^c   Housman, David E ^c   Dietz Band, Jeanne ^d   Riethman, Harold C ^e   Collins, Francis S ^b   Brody, Lawrence C ^b  

^a UNIVERSITY OF MICHIGAN   (United States)

^b NATIONAL HUMAN GENOME RESEARCH INSTITUTE   (United States)

^c MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^d Oncor Inc   (United States)

^e WISTAR INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANGIOGENIN; RAS PROTEIN; RIBONUCLEASE;

ARTICLE; CHROMOSOME 11P; COSMID; GENE ISOLATION; GENE MAPPING; HETEROZYGOSITY; HUMAN; HUMAN CELL; MOLECULAR CLONING; ONCOGENE RAS; PRIORITY JOURNAL; SEQUENCE ANALYSIS; TELOMERE;

EID: 0030586232     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1996.0367     Document Type: Article

References (33)

1. Bepler, G., and Garciablanco, M. A. (1994). Three tumor-suppressor regions on chromosome 11p identified by high-resolution deletion mapping in human non-small-cell lung cancer. Proc. Natl. Acad. Sci. USA 91: 5513-5517.
2. Brown, W. R. A., MacKinnon, P. J., Willasante, A., Spurr, N., Buckle, V. J., and Dobson, M. J. (1990). Structure and polymorphism of human telomere-associated DNA. Cell 63: 119-132.
3. Browne, D. L., Smith, E. A., Dietz-Band, J., Riethman, H. C., Phromchotikul, T., and Litt, M. (1995). Dinucleotide repeat polymorphism at the human chromosome 11p telomere (D11S2071). Genomics 25: 600-601.
4. Buckler, A. J., Chang, D. D., Graw, S. L., Brook, J. D., Haber, D. A., Sharp, P. A., and Housman, D. E. (1991). Exon amplification: A strategy to isolate mammalian genes based on RNA splicing. Proc. Natl. Acad. Sci. USA 88: 4005-4009.
5. Chandrasekharappa, S. C., Marchuk, D. A., and Collins, F. S. (1992). Analysis of yeast artificial chromosome clones. In "Methods in Molecular Biology, Pulse Field Gel Electrophoresis" (M. Burmeister and L. Ulanovsky, Eds.), Vol. 12, pp. 235-255. Humana, Totowa, NJ.
6. Cohen, D., Chumakov, I., Weissenbach, J., et al. (1993). A first generation physical map of the human genome. Nature 16: 698-701.
7. Counter, C. M., Hirte, H. W., Bachetti, S., and Harley, C. (1994). Telomerase activity in human ovarian carcinoma. Proc. Natl. Acad. Sci. USA 91: 2900-2904.
8. Flejter, W. L., Bennett-Baker, P., Barcroft, C. L., Kiousis, S., and Chamberlain, J. S. (1995). Region-specific cosmids and STRPs identified by chromosome microdisection and FISH. Genomics 25: 413-420.
9. Harley, C. B., Vaziri, H., Counter, C. M., and Allsopp, R. C. (1992). The telomere hypothesis of cellular aging. Exp. Gerontol. 27: 375-382.
10. Higgins, M. J., Smilinich, N. J., Sait, S., Koenig, A., Pongratz, J., Gessler, M., Richard, C. W., III, James, M. R., Sanford, J. P., Kim, B.-W., Cattlelane, J., Nowak, N. J., Winterpacht, A., Zabel, B. U., Munroe, D. J., Bric, E., Housman, D. E., Jones, C., Nakamura, Y., Gerhard, D. S., and Shows, T. B. (1994). An ordered NotI fragment map of human chromosome band 11p15. Genomics 23: 211-222.
11. Hudson, T. J., Stein, L. D., Gerety, S. S., Ma, J., Castle, A. B., et al. (1995). An STS-based map of the human genome. Science 270: 1945-1954.
12. Ijdo, J. W., Lindsay, E. A., Wells, R. A., and Baldini, A. (1992). Multiple variants in subtelomeric regions of normal karyotypes. Genomics 14: 1019-1025.
13. Kvaloy, K. F., Galvagni, F., and Brown, W. R. A. (1994). The sequence organization of the long arm pseudoautosomal region of human sex chromosomes. Hum. Mol. Genet. 3: 771-778.
14. Liu, P., Siciliano, J., Seong, D., Craig, J., Zhao, Y., deJong, P. J., and Siciliano, M. J. (1993). Dual Alu polymerase chain reaction primers and conditions for isolation of human chromosome painting probes from hybrid cells. Cancer Genet. Cytogenet. 65: 93-99.
15. Macina, R. A., Negorev, D. G., Spais, C., Ruthig, L. A., Hu, X.-L., and Riethman, H. C. (1994). Sequence organization of the human chromosome 2q telomere. Hum. Mol. Genet. 3: 1847-1853.
16. Morgan, J. G., Dolganov, G. M., Robbins, S. E., Hinton, L. M., and Lovett, M. (1992). The selective isolation of novel cDNAs encoded by the regions surrounding the human Interleukin 4 and 5 genes. Nucleic Acids Res. 20: 5173-5179.
17. Negorev, D. G., Macina, R. A., Spais, C., Ruthig, L. A., Hu, X.-L., and Riethman, H. C. (1994). Physical analysis of the terminal 270 kb of DNA from human chromosome 1q. Genomics 22: 569-578.
18. Petronis, A., Van Tol, H. H. M., Lichter, J. B., Livak, K. J., and Kennedy, J. L. (1993). The D4 dopamine receptor gene maps 11p proximal to HRAS. Genomics 18: 161-163.
19. Redeker, E., Hoovers, J. M. N., Alders, M., van Moorsel, C. J. A., Ivens, A. C., Gregory, S., Kalikin, L., Bliek, J., de Galan, L., van den Bogaard, R., Visser, J., van der Voort, R., Feinberg, A. P., Little, P. F. R., Westerveld, A., and Mannens, M. (1994). An integrated physical map of 210 markers assigned to the short arm of human chromosome 11. Genomics 21: 538-550.
20. Riethman, H. C., Moyzis, R. K., Meyne, J., Burke, D. T., and Olson, M. V. (1989). Cloning human telomeric DNA fragments into Saccharomyces cerevisiae using a yeast-artificial-chromosome vector. Proc. Natl. Acad. Sci. USA 86: 6240-6244.
21. Saccone, S., Desario, A., Dellavalle, G., and Bernardi, G. (1992). The highest gene concentrations in the human genome are in the telomeric bands of metaphase chromosomes. Proc. Natl. Acad. Sci. USA 89: 4913-4917.
22. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989). "Molecular Cloning: A Laboratory Manual," 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
23. Schneider, R., Higgins, M. J., Kieninger, D., Schneider-Scherzer, E., Hirsch-Kauffmann, M., Schweiger, M., Eddy, R. L., Shows, T. B., and Zabel, B. U. (1992). The ribonuclease/angiogenin inhibitor is encoded by a gene mapped to chromosome 11p15.5, within 90 kb of the HRAS protooncogene. Cytogenet. Cell Genet. 59: 264-267.
24. Shepard, N. S., Pfrogner, B. D., Coulby, J. N., Ackerman, S. L., Vaidyanathan, G., Sauer, R. H., Balkenhol, T. C., and Sternberg, N. (1994). Preparation and screening of an arrayed human genomic library generated with the P1 cloning system. Proc. Natl. Acad. Sci. USA 91: 2629-2633.
25. Smith, M. W., Clark, S. P., Hutchinson, J. S., Wei, Y. H., Churukian, A. C., Daniels, L. B., Diggle, K. L., Gen, M. W., Romo, A. J., Lin, Y., Selleri, L., McElligott, D. L., and Evans, G. A. (1993). A sequence-tagged site map of human chromosome 11. Genomics 17: 699-725.
26. Southard-Smith, M., Pierce, J. C., and MacDonald, R. J. (1994). Physical mapping of the rat tissue kallikrein family in two gene clusters by analysis of P1 bacteriophage clones. Genomics 22: 404-417.
27. Thäte, C., Pongratz, J., Konig, A., Klamt, B., Tsaoussidou, S., Higgins, M., Shows, T., Jones, C., and Gessler, M. (1995). CpG island clones for chromosome 11p-A resource for mapping and gene identification. Mamm. Genome 6: 421-425.
28. Tokino, T., Takahashi, E.-i., Masaki, M., Tanigami, A., Glaser, T., Park, J. W., Jones, C., Hori, T.-a., and Nakamura, Y. (1991). Isolation and mapping of 62 new RFLP markers on human chromosome 11. Am. J. Hum. Genet. 48: 258-268.
29. Wang, Q., and Keating, M. (1994). Isolation of P1 insert ends by direct sequencing. Bio Techniques 17: 282-284.
30. Weitzel, J. N., Kasperczyk, A., Mohan, C., and Krontiris, T. G. (1992). The HRAS1 gene cluster: Two upstream regions recognizing transcripts and a third encoding a gene with a leucine zipper domain. Genomics 14: 309-319.
31. Wilkie, A. O. M., Higgs, D. R., Rack, K. A., Buckle, V. J., Spurr, N. K., Fischel-Ghodsian, N., Ceccherini, I., Brown, W. R. A., and Harris, P. C. (1991). Stable length polymorphism of up to 260 kb at the tip of the short arm of chromosome 16. Cell 64: 595-606.
32. Zakian, V. A. (1995). Telomeres: Beginning to understand the end. Science 270: 1601-1606.
33. Zhong, Z., Shiue, L., Kaplan, S., and de Lange, T. (1992). A mammalian factor that binds telomeric TTAGGG repeats in vitro. Mol. Cell. Biol. 12: 4834-4843.