-
1
-
-
0026530492
-
Allosteric underwinding of DNA is a critical step in positive control of transcription by Hg-MerR
-
Ansari, A. Z., Chael, M. L. & O'Halloran, T. V. (1992). Allosteric underwinding of DNA is a critical step in positive control of transcription by Hg-MerR. Nature, 355, 87-89.
-
(1992)
Nature
, vol.355
, pp. 87-89
-
-
Ansari, A.Z.1
Chael, M.L.2
O'Halloran, T.V.3
-
2
-
-
0028918916
-
DNA-bend modulation is a repressor-to-activator switching mechanism
-
Ansari, A. Z., Bradmer, J. E. & O'Halloran, T. V. (1995). DNA-bend modulation is a repressor-to-activator switching mechanism. Nature, 374, 371-375.
-
(1995)
Nature
, vol.374
, pp. 371-375
-
-
Ansari, A.Z.1
Bradmer, J.E.2
O'Halloran, T.V.3
-
3
-
-
0026754084
-
Functionally distinct RNA polymerase binding sites in the phage Mu mom promoter region
-
Balke, V., Nagaraja, V., Gindlesperger, T. & Hattman, S. (1992). Functionally distinct RNA polymerase binding sites in the phage Mu mom promoter region. Nucl. Acids Res. 20, 2777-2784.
-
(1992)
Nucl. Acids Res.
, vol.20
, pp. 2777-2784
-
-
Balke, V.1
Nagaraja, V.2
Gindlesperger, T.3
Hattman, S.4
-
4
-
-
0024456616
-
The Escherichia coli regulatory protein OxyR discriminates between methylated and unmethylated states of the phage Mu mom promoter
-
Bolker, M. & Kahmann, R. (1989). The Escherichia coli regulatory protein OxyR discriminates between methylated and unmethylated states of the phage Mu mom promoter. EMBO J. 8, 2403-2410.
-
(1989)
EMBO J.
, vol.8
, pp. 2403-2410
-
-
Bolker, M.1
Kahmann, R.2
-
5
-
-
0024524258
-
Role of bacteriophage Mu C protein in activation of the mom gene promoter
-
Bolker, M., Wulczyn, F. G. & Kahmann, R. (1989). Role of bacteriophage Mu C protein in activation of the mom gene promoter. J. Bacteriol. 171, 2019-2027.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 2019-2027
-
-
Bolker, M.1
Wulczyn, F.G.2
Kahmann, R.3
-
6
-
-
0025615671
-
Arc represser is tetrameric when bound to operator DNA
-
Brown, B. M., Bowie, J. U. & Sauer, R. T. (1990). Arc represser is tetrameric when bound to operator DNA. Biochemistry, 29, 11189-11195.
-
(1990)
Biochemistry
, vol.29
, pp. 11189-11195
-
-
Brown, B.M.1
Bowie, J.U.2
Sauer, R.T.3
-
7
-
-
0027428666
-
Mutational analysis of a C-dependent late promoter of bacteriophage Mu
-
Chiang, L. W. & Howe, M. M. (1993). Mutational analysis of a C-dependent late promoter of bacteriophage Mu. Genetics, 135, 619-629.
-
(1993)
Genetics
, vol.135
, pp. 619-629
-
-
Chiang, L.W.1
Howe, M.M.2
-
8
-
-
0023032496
-
Mapping of the sites of protection on a 5 S RNA gene by the Xenopus transcription factor IIIA. A model for the interaction
-
Fairall, L., Rhodes, D. & Klug, A. (1986). Mapping of the sites of protection on a 5 S RNA gene by the Xenopus transcription factor IIIA. A model for the interaction. J. Mol. Biol. 192, 577-591.
-
(1986)
J. Mol. Biol.
, vol.192
, pp. 577-591
-
-
Fairall, L.1
Rhodes, D.2
Klug, A.3
-
9
-
-
0025292582
-
DNA distortion accompanies transcriptional activation by the metal-repressor gene-regulatory protein MerR
-
Frantz, B. & O'Halloran, T. V. (1990). DNA distortion accompanies transcriptional activation by the metal-repressor gene-regulatory protein MerR. Biochemistry, 29, 4747-4751.
-
(1990)
Biochemistry
, vol.29
, pp. 4747-4751
-
-
Frantz, B.1
O'Halloran, T.V.2
-
10
-
-
0028287790
-
In vitro transcriptional activation of the phage Mu mom promoter by C protein
-
Gindlesperger, T. L. & Hattman, S. (1994). In vitro transcriptional activation of the phage Mu mom promoter by C protein. J. Bacteriol. 176, 2885-2891.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2885-2891
-
-
Gindlesperger, T.L.1
Hattman, S.2
-
11
-
-
0023650609
-
Analysis of E. coli promoter sequences
-
Harley, C. B. & Reynolds, R. P. (1987). Analysis of E. coli promoter sequences. Nucl. Acids Res. 15, 2343-2361.
-
(1987)
Nucl. Acids Res.
, vol.15
, pp. 2343-2361
-
-
Harley, C.B.1
Reynolds, R.P.2
-
12
-
-
0020444969
-
DNA methyltransferase-dependent transcription of the phage Mu mom gene
-
Hattman, S. (1982). DNA methyltransferase-dependent transcription of the phage Mu mom gene. Proc. Natl Acad. Sci. USA, 79, 5518-5521.
-
(1982)
Proc. Natl Acad. Sci. USA
, vol.79
, pp. 5518-5521
-
-
Hattman, S.1
-
13
-
-
0022389363
-
Regulation and expression of the bacteriophage Mu mom gene: Mapping of the transactivation (Dad) function to the C region
-
Hattman, S., Ives, J., Margolin, W. & Howe, M. M. (1985). Regulation and expression of the bacteriophage Mu mom gene: mapping of the transactivation (Dad) function to the C region. Gene, 39, 71-76.
-
(1985)
Gene
, vol.39
, pp. 71-76
-
-
Hattman, S.1
Ives, J.2
Margolin, W.3
Howe, M.M.4
-
14
-
-
0025787594
-
Com, the phage Mu mom translational activator, is a zinc-binding protein that binds specifically to its cognate mRNA
-
Hattman, S. Newman, L., Krishna Murthy, H.M. & Nagaraja, V. (1991). Com, the phage Mu mom translational activator, is a zinc-binding protein that binds specifically to its cognate mRNA. Proc. Natl Acad. Sci. USA, 88, 10027-10031.
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 10027-10031
-
-
Hattman, S.1
Newman, L.2
Krishna Murthy, H.M.3
Nagaraja, V.4
-
15
-
-
0021111879
-
Compilation and analysis of Escherichia coli promoter DNA sequences
-
Hawley, D. K. & McClure, W. R. (1983). Compilation and analysis of Escherichia coli promoter DNA sequences. Nucl. Adds Res. 11, 2237-2255.
-
(1983)
Nucl. Adds Res.
, vol.11
, pp. 2237-2255
-
-
Hawley, D.K.1
McClure, W.R.2
-
16
-
-
0022480197
-
The sequence and mom transactivation function of the C gene of bacteriophage Mu
-
Heisig, P. & Kahmann, R. (1986). The sequence and mom transactivation function of the C gene of bacteriophage Mu. Gene, 43, 59-67.
-
(1986)
Gene
, vol.43
, pp. 59-67
-
-
Heisig, P.1
Kahmann, R.2
-
17
-
-
0001909116
-
Regulation and expression of the mom gene
-
(Symonds, N., Toussaint, A., Van de Putte, P. & Howe, M. M., eds), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Kahmann, R. & Hattman, S. (1987). Regulation and expression of the mom gene. In Phage Mu (Symonds, N., Toussaint, A., Van de Putte, P. & Howe, M. M., eds), pp. 93-109, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1987)
Phage Mu
, pp. 93-109
-
-
Kahmann, R.1
Hattman, S.2
-
18
-
-
0027236999
-
Transcriptional regulation by cAMP and its receptor protein
-
Kolb, A., Busbu, S., Buc, H., Garges, S. & Adhya, S. (1993). Transcriptional regulation by cAMP and its receptor protein. Annu. Rev. Biochem. 62, 749-795.
-
(1993)
Annu. Rev. Biochem.
, vol.62
, pp. 749-795
-
-
Kolb, A.1
Busbu, S.2
Buc, H.3
Garges, S.4
Adhya, S.5
-
19
-
-
0023658615
-
Footprinting DNA-protein complexes in situ following gel retardation assays using 1,10-phenanthroline-copper ion: Escherichia coli RNA-polymerase-lac promoter complexes
-
Kuwabara, M. D. & Sigman, D. (1987). Footprinting DNA-protein complexes in situ following gel retardation assays using 1,10-phenanthroline-copper ion: Escherichia coli RNA-polymerase-lac promoter complexes. Biochemistry, 26, 7234-7238.
-
(1987)
Biochemistry
, vol.26
, pp. 7234-7238
-
-
Kuwabara, M.D.1
Sigman, D.2
-
20
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
21
-
-
0023056766
-
Localization and DNA sequence analysis of the C gene of bacteriophage Mu, the positive regulator of Mu late transcription
-
Margolin, W. & Howe, M. M. (1986). Localization and DNA sequence analysis of the C gene of bacteriophage Mu, the positive regulator of Mu late transcription. Nucl. Acids Res. 14, 4881-4897.
-
(1986)
Nucl. Acids Res.
, vol.14
, pp. 4881-4897
-
-
Margolin, W.1
Howe, M.M.2
-
22
-
-
0024591791
-
Bacteriophage Mu late promoters: Four late transcripts initiate near a conserved sequence
-
Margolin, W., Rao, G. & Howe, M. M. (1989). Bacteriophage Mu late promoters: four late transcripts initiate near a conserved sequence. J. Bacteriol. 171, 2003-2018.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 2003-2018
-
-
Margolin, W.1
Rao, G.2
Howe, M.M.3
-
23
-
-
0018846636
-
Sequencing end-labeled DNA with base-specific chemical cleavages
-
Maxam, A, M. & Gilbert, W. (1980). Sequencing end-labeled DNA with base-specific chemical cleavages. Methods Enzymol. 65, 494-560.
-
(1980)
Methods Enzymol.
, vol.65
, pp. 494-560
-
-
Maxam, A.M.1
Gilbert, W.2
-
24
-
-
0022964809
-
Structure of the DNA- EcoRI endonuclease recognition complex at 3 Å resolution
-
McClarin, J. A., Frederick, C. A., Wang, B. C., Greene, P., Boyer, H. W., Grable, J. & Rosenberg, J. M. (1986). Structure of the DNA-EcoRI endonuclease recognition complex at 3 Å resolution. Science, 234, 1526-1541.
-
(1986)
Science
, vol.234
, pp. 1526-1541
-
-
McClarin, J.A.1
Frederick, C.A.2
Wang, B.C.3
Greene, P.4
Boyer, H.W.5
Grable, J.6
Rosenberg, J.M.7
-
25
-
-
0024005342
-
The phage Mu late transcription factor, C, is a sitespecific DNA binding protein
-
Nagaraja, V., Hecht, G. & Hattman, S. (1988). The phage Mu late transcription factor, C, is a sitespecific DNA binding protein. Biochem. Pharmacol. 37, 1809-1810.
-
(1988)
Biochem. Pharmacol.
, vol.37
, pp. 1809-1810
-
-
Nagaraja, V.1
Hecht, G.2
Hattman, S.3
-
26
-
-
0025362617
-
Fusions to staphylococcal protein A
-
Nilssen, B. & Abrahmsen, L. (1985). Fusions to staphylococcal protein A. Methods Enzymol. 185, 144-161.
-
(1985)
Methods Enzymol.
, vol.185
, pp. 144-161
-
-
Nilssen, B.1
Abrahmsen, L.2
-
27
-
-
0026682657
-
Transcription factors: Structural families and principles of DNA recognition
-
Pabo, C. O. & Sauer, R. T. (1992). Transcription factors: structural families and principles of DNA recognition. Annu. Rev. Biochem. 61, 1053-1095.
-
(1992)
Annu. Rev. Biochem.
, vol.61
, pp. 1053-1095
-
-
Pabo, C.O.1
Sauer, R.T.2
-
28
-
-
0021668178
-
Positive control of transcription initiation in bacteria
-
Raibaud, O. & Schwartz, M. (1984). Positive control of transcription initiation in bacteria. Annu. Rev. Genet. 18, 173-206.
-
(1984)
Annu. Rev. Genet.
, vol.18
, pp. 173-206
-
-
Raibaud, O.1
Schwartz, M.2
-
29
-
-
0028070964
-
Engineering hyperexpression of bacteriophage Mu C protein by removal of secondary structure at the translation initiation region
-
Ramesh, V., De, A. & Nagaraja, V. (1994a). Engineering hyperexpression of bacteriophage Mu C protein by removal of secondary structure at the translation initiation region. Protein Eng. 7, 1053-1057.
-
(1994)
Protein Eng.
, vol.7
, pp. 1053-1057
-
-
Ramesh, V.1
De, A.2
Nagaraja, V.3
-
30
-
-
0028119352
-
Overproduction and purification of C protein, the late gene transcription activator from phage Mu
-
Ramesh, V., De, A. & Nagaraja, V. (1994b). Overproduction and purification of C protein, the late gene transcription activator from phage Mu. Protein Exp. Purif. 5, 379-384.
-
(1994)
Protein Exp. Purif.
, vol.5
, pp. 379-384
-
-
Ramesh, V.1
De, A.2
Nagaraja, V.3
-
31
-
-
0003903343
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd edit., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Edit.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
32
-
-
0024474697
-
4 as a probe for lac promoter DNA melting and mechanisms in vivo
-
4 as a probe for lac promoter DNA melting and mechanisms in vivo. J. Biol. Chem. 264, 8074-8081.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 8074-8081
-
-
Sasse-Dwight, S.1
Gralla, J.D.2
-
33
-
-
0021683988
-
Insulin-induced rapid decrease of a major protein in fat cell plasma membrane
-
Schoenle, E. J., Adams, L. D. & Sammons, D. W. (1984). Insulin-induced rapid decrease of a major protein in fat cell plasma membrane. J. Biol. Chem. 259, 12112-12116.
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 12112-12116
-
-
Schoenle, E.J.1
Adams, L.D.2
Sammons, D.W.3
-
34
-
-
0025914242
-
Crystal structure of a CAP-DNA complex: The DNA is bent by 90°
-
Schultz, S. C., Shields, G. C. & Steitz, T. A. (1991). Crystal structure of a CAP-DNA complex: the DNA is bent by 90°. Science, 253, 1001-1007.
-
(1991)
Science
, vol.253
, pp. 1001-1007
-
-
Schultz, S.C.1
Shields, G.C.2
Steitz, T.A.3
-
35
-
-
0000127073
-
Sequence-specific recognition of double helical nucleic acids by proteins
-
Seeman, N. C., Rosenberg, J. M. & Rich, A. (1976). Sequence-specific recognition of double helical nucleic acids by proteins. Proc. Natl Acad. Sci. USA, 73, 804-808.
-
(1976)
Proc. Natl Acad. Sci. USA
, vol.73
, pp. 804-808
-
-
Seeman, N.C.1
Rosenberg, J.M.2
Rich, A.3
-
36
-
-
0010291050
-
Contacts between Escherichia coli RNA polymerase and an early promoter of phage T7
-
Siebenlist, U. & Gilbert, W. (1980). Contacts between Escherichia coli RNA polymerase and an early promoter of phage T7. Proc. Natl Acad. Sci. USA, 77, 122-126.
-
(1980)
Proc. Natl Acad. Sci. USA
, vol.77
, pp. 122-126
-
-
Siebenlist, U.1
Gilbert, W.2
-
37
-
-
0021992152
-
Conformational analysis of lac promoters using the nuclease activity of 1,10-phenanthroline-copper ion
-
Sigman, D. S., Spassky, A., Rimsky, S. & Buc, H. (1985). Conformational analysis of lac promoters using the nuclease activity of 1,10-phenanthroline-copper ion. Biopolymers, 24, 183-197.
-
(1985)
Biopolymers
, vol.24
, pp. 183-197
-
-
Sigman, D.S.1
Spassky, A.2
Rimsky, S.3
Buc, H.4
-
38
-
-
0026323540
-
Nuclease activity of 1,10-phenanthroline copper in study of protein-DNA interactions
-
Sigman, D. S., Kuwabara, M. D., Chen, C.-H.B. & Bruice, T. W. (1991). Nuclease activity of 1,10-phenanthroline copper in study of protein-DNA interactions. Methods Enzymol. 208, 414-433.
-
(1991)
Methods Enzymol.
, vol.208
, pp. 414-433
-
-
Sigman, D.S.1
Kuwabara, M.D.2
Chen, C.-H.B.3
Bruice, T.W.4
-
39
-
-
0022302440
-
Nuclease activity of 1,10-phenanthroline-copper ion. Conformational analysis and footprinting of the lac operon
-
Spassky, A. & Sigman, D. (1985). Nuclease activity of 1,10-phenanthroline-copper ion. Conformational analysis and footprinting of the lac operon. Biochemistry, 24, 8050-8056.
-
(1985)
Biochemistry
, vol.24
, pp. 8050-8056
-
-
Spassky, A.1
Sigman, D.2
-
40
-
-
0016759612
-
The specificity of different classes of ethylating agents toward various sites of Hela cell DNA in vitro and in vivo
-
Sun, L. & Singer, B. (1975). The specificity of different classes of ethylating agents toward various sites of HeLa cell DNA in vitro and in vivo. Biochemistry, 14, 1795-1802.
-
(1975)
Biochemistry
, vol.14
, pp. 1795-1802
-
-
Sun, L.1
Singer, B.2
-
41
-
-
0028609064
-
DNA recognition code of transcription factors in the helix-turn-helix, probe helix, hormone receptor and zinc finger families
-
Suzuki, M. & Yagi, N. (1994). DNA recognition code of transcription factors in the helix-turn-helix, probe helix, hormone receptor and zinc finger families. Proc. Natl Acad. Sci. USA, 91, 12357-12361.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 12357-12361
-
-
Suzuki, M.1
Yagi, N.2
-
42
-
-
0025308846
-
Chemical nuclease activity of 5-phenyl-1,10-phenanthroline-copper ion detects intermediates in transcription initiation by E. coli RNA polymerase
-
Thederahn, T. B., Spassky, A., Kuwabara, M. D. & Sigman, D. S. (1990). Chemical nuclease activity of 5-phenyl-1,10-phenanthroline-copper ion detects intermediates in transcription initiation by E. coli RNA polymerase. Biochem. Biophys. Res. Commun. 168, 756-762.
-
(1990)
Biochem. Biophys. Res. Commun.
, vol.168
, pp. 756-762
-
-
Thederahn, T.B.1
Spassky, A.2
Kuwabara, M.D.3
Sigman, D.S.4
-
43
-
-
0002098922
-
DNA conformation and configuration in protein-DNA complexes
-
Travers, A. (1992). DNA conformation and configuration in protein-DNA complexes. Curr. Opin. Struct. Biol. 2, 71-77.
-
(1992)
Curr. Opin. Struct. Biol.
, vol.2
, pp. 71-77
-
-
Travers, A.1
-
44
-
-
0001268975
-
Hydroxyl radical footprinting: High-resolution information about DNA-protein contacts and application to λ repressor and cro proteins
-
Tullius, T. D. & Dombroski, B. A. (1986). Hydroxyl radical footprinting: high-resolution information about DNA-protein contacts and application to λ repressor and cro proteins. Proc. Natl Acad. Sci. USA, 83, 5469-5473.
-
(1986)
Proc. Natl Acad. Sci. USA
, vol.83
, pp. 5469-5473
-
-
Tullius, T.D.1
Dombroski, B.A.2
-
45
-
-
0026335587
-
Hydroxyl radical footprinting
-
Wendy, D. J., Hayes, J. J., Levin, J. R., Weidner, M. F., Dombroski, B. A. & Tullius, T. D. (1991). Hydroxyl radical footprinting. Methods Enzymol. 208, 380-414.
-
(1991)
Methods Enzymol.
, vol.208
, pp. 380-414
-
-
Wendy, D.J.1
Hayes, J.J.2
Levin, J.R.3
Weidner, M.F.4
Dombroski, B.A.5
Tullius, T.D.6
-
46
-
-
0025903438
-
Translational stimulation: RNA sequence and structure requirements for binding of Com protein
-
Wulczyn, F. G. & Kahmann, R. (1991). Translational stimulation: RNA sequence and structure requirements for binding of Com protein. Cell, 65, 259-269.
-
(1991)
Cell
, vol.65
, pp. 259-269
-
-
Wulczyn, F.G.1
Kahmann, R.2
|