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Volumn 83, Issue 1, 1996, Pages 11-23

Human and fungal 3' splice sites are used by Trypanosoma brucei for trans splicing

Author keywords

pre mRNA splicing; Trypanosoma brucei

Indexed keywords

MESSENGER RNA;

EID: 0030566657     PISSN: 01666851     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0166-6851(96)02742-9     Document Type: Article
Times cited : (6)

References (43)
  • 1
    • 0025339650 scopus 로고
    • Trans splicing of nuclear pre-mRNAs
    • [1] Agabian, N. (1990) Trans splicing of nuclear pre-mRNAs. Cell 61, 1157-1160.
    • (1990) Cell , vol.61 , pp. 1157-1160
    • Agabian, N.1
  • 2
    • 0025988382 scopus 로고
    • In vivo UV cross-linking of U snRNAs that participate in trypanosome trans-splicing
    • [2] Watkins, K.P. and Agabian, N. (1991) In vivo UV cross-linking of U snRNAs that participate in trypanosome trans-splicing. Genes Dev. 5, 1859-1869.
    • (1991) Genes Dev. , vol.5 , pp. 1859-1869
    • Watkins, K.P.1    Agabian, N.2
  • 3
    • 0025639012 scopus 로고
    • Evidence for base-pairing between mammalian U2 and U6 small nuclear ribonucleoprotein particles
    • [3] Hausner, T.-P., Giglio, L.M. and Weiner, A.M. (1990) Evidence for base-pairing between mammalian U2 and U6 small nuclear ribonucleoprotein particles. Genes Dev. 4, 2146-2156.
    • (1990) Genes Dev. , vol.4 , pp. 2146-2156
    • Hausner, T.-P.1    Giglio, L.M.2    Weiner, A.M.3
  • 4
    • 0001877802 scopus 로고
    • Gesteland, R. and Atkins, J., eds., Cold Spring Harbor Laboratory Press, New York
    • [4] Moore, M.J., Query, C.C. and Sharp, P.A. (1993) In: The RNA World (Gesteland, R. and Atkins, J., eds.), pp. 303-357, Cold Spring Harbor Laboratory Press, New York.
    • (1993) The RNA World , pp. 303-357
    • Moore, M.J.1    Query, C.C.2    Sharp, P.A.3
  • 5
    • 0026030643 scopus 로고
    • A U-rich tract enhances usage of an alternative 3′ splice site in yeast
    • [5] Patterson, B. and Guthrie, C. (1991) A U-rich tract enhances usage of an alternative 3′ splice site in yeast. Cell 64, 181-187.
    • (1991) Cell , vol.64 , pp. 181-187
    • Patterson, B.1    Guthrie, C.2
  • 6
    • 0028960809 scopus 로고
    • A novel role for a U5 snRNP protein in 3qw splice site selection
    • [6] Umen, J.G. and Guthrie, C. (1995) A novel role for a U5 snRNP protein in 3qw splice site selection. Genes Dev. 9, 855-868.
    • (1995) Genes Dev. , vol.9 , pp. 855-868
    • Umen, J.G.1    Guthrie, C.2
  • 7
    • 0026058914 scopus 로고
    • Requirement of a polypyrimidine tract for trans-splicing in trypanosomes: Discriminating the PARP promoter from the immediately adjacent 3′ splice acceptor site
    • [7] Huang, J. and Van der Ploeg, L.H.T. (1991) Requirement of a polypyrimidine tract for trans-splicing in trypanosomes: discriminating the PARP promoter from the immediately adjacent 3′ splice acceptor site. EMBO J. 10, 3877-3885.
    • (1991) EMBO J. , vol.10 , pp. 3877-3885
    • Huang, J.1    Van Der Ploeg, L.H.T.2
  • 8
    • 0025102251 scopus 로고
    • Nuclear pre-mRNA introns: Analysis and comparison of intron sequences from Tetrahymena thermophila and other eukaryotes
    • [8] Csank, C., Taylor, F.M. and Martindale, D.W. (1990) Nuclear pre-mRNA introns: analysis and comparison of intron sequences from Tetrahymena thermophila and other eukaryotes. Nucl. Acids Res. 18, 5133-5141.
    • (1990) Nucl. Acids Res. , vol.18 , pp. 5133-5141
    • Csank, C.1    Taylor, F.M.2    Martindale, D.W.3
  • 9
    • 0024967250 scopus 로고
    • The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing
    • [9] Goodall, G.J. and Filipowicz, W. (1989) The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing. Cell 58, 473-483.
    • (1989) Cell , vol.58 , pp. 473-483
    • Goodall, G.J.1    Filipowicz, W.2
  • 10
    • 0026657738 scopus 로고
    • Splicing signals in Drosophila: Intron size, information content, and consensus sequences
    • [10] Mount, S.M., Burks, C., Hertz, G., Stormo, G.D., White, O. and Fields, C. (1992) Splicing signals in Drosophila: intron size, information content, and consensus sequences. Nucl. Acids Res. 20, 4255-4262.
    • (1992) Nucl. Acids Res. , vol.20 , pp. 4255-4262
    • Mount, S.M.1    Burks, C.2    Hertz, G.3    Stormo, G.D.4    White, O.5    Fields, C.6
  • 11
    • 0027391513 scopus 로고
    • Splicing in Caenorhabditis elegans does not require an AG at the 3′ splice acceptor site
    • [11] Aroian, R.V., Levy, A.D., Koga, M., Ohshima, Y., Kramer, J.M. and Sternberg, P.W. (1993) Splicing in Caenorhabditis elegans does not require an AG at the 3′ splice acceptor site. Mol. Cell. Biol. 13, 626-637.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 626-637
    • Aroian, R.V.1    Levy, A.D.2    Koga, M.3    Ohshima, Y.4    Kramer, J.M.5    Sternberg, P.W.6
  • 12
    • 0023057184 scopus 로고
    • The U2 RNA analogue of Trypanosoma brucei gambiense: Implications for a splicing mechanism in trypanosomes
    • [12] Tschudi, C., Richards, F.F. and Ullu, E. (1986) The U2 RNA analogue of Trypanosoma brucei gambiense: implications for a splicing mechanism in trypanosomes. Nucl. Acids Res. 14, 8893-8903.
    • (1986) Nucl. Acids Res. , vol.14 , pp. 8893-8903
    • Tschudi, C.1    Richards, F.F.2    Ullu, E.3
  • 13
    • 0024473511 scopus 로고
    • Mapping of branch sites in trans-spliced pre-mRNAs of Trypanosoma brucei
    • [13] Patzelt, E., Perry, K.L. and Agabian, N. (1989) Mapping of branch sites in trans-spliced pre-mRNAs of Trypanosoma brucei. Mol. Cell. Biol. 9, 4291-4297.
    • (1989) Mol. Cell. Biol. , vol.9 , pp. 4291-4297
    • Patzelt, E.1    Perry, K.L.2    Agabian, N.3
  • 14
    • 0025694820 scopus 로고
    • A new U2 RNA secondary structure provided by phylogenetic analysis of trypanosomatid U2 RNAs
    • [14] Hartshorne, T. and Agabian, N. (1990) A new U2 RNA secondary structure provided by phylogenetic analysis of trypanosomatid U2 RNAs. Genes Dev. 4, 2121-2131.
    • (1990) Genes Dev. , vol.4 , pp. 2121-2131
    • Hartshorne, T.1    Agabian, N.2
  • 15
    • 0025674254 scopus 로고
    • Lethal and temperature-sensitive mutations and their suppressors identify an essential structural element in U2 small nuclear RNA
    • [15] Ares, M.J. and Igel, A.H. (1990) Lethal and temperature-sensitive mutations and their suppressors identify an essential structural element in U2 small nuclear RNA. Genes Dev. 4, 2132-2145.
    • (1990) Genes Dev. , vol.4 , pp. 2132-2145
    • Ares, M.J.1    Igel, A.H.2
  • 18
    • 0023045658 scopus 로고
    • Three small RNAs within the 10 kb trypanosome rRNA transcription unit are analogous to domain VII of other eukaryotic 28S rRNAs
    • [18] White, T.C., Rudenko, G. and Borst, P. (1986) Three small RNAs within the 10 kb trypanosome rRNA transcription unit are analogous to domain VII of other eukaryotic 28S rRNAs. Nucl. Acids Res. 14, 9471-9489.
    • (1986) Nucl. Acids Res. , vol.14 , pp. 9471-9489
    • White, T.C.1    Rudenko, G.2    Borst, P.3
  • 19
    • 0025994368 scopus 로고
    • Alpha-amanitin-resistant transcription units in trypanosomes: A comparison of promoter sequences for a VSG gene expression site and for the ribosomal RNA genes
    • [19] Zomerdijk, J.C.B.M., Kieft, R., Shiels, P.G. and Borst, P. (1991) Alpha-amanitin-resistant transcription units in trypanosomes: a comparison of promoter sequences for a VSG gene expression site and for the ribosomal RNA genes. Nucl. Acids Res. 19, 5153-5158.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 5153-5158
    • Zomerdijk, J.C.B.M.1    Kieft, R.2    Shiels, P.G.3    Borst, P.4
  • 20
    • 0022747370 scopus 로고
    • Mutations in conserved intron sequences affect multiple steps in the yeast splicing pathway, particularly assembly of the spliceosome
    • [20] Vijayraghavan, U., Parker, R., Tamm, J., Iimura, Y., Rossi, J., Abelson, J. and Guthrie, C. (1986) Mutations in conserved intron sequences affect multiple steps in the yeast splicing pathway, particularly assembly of the spliceosome. EMBO J. 5, 1683-1695.
    • (1986) EMBO J. , vol.5 , pp. 1683-1695
    • Vijayraghavan, U.1    Parker, R.2    Tamm, J.3    Iimura, Y.4    Rossi, J.5    Abelson, J.6    Guthrie, C.7
  • 21
    • 0026039804 scopus 로고
    • Selection of splice sites in pre-mRNAs with short internal exons
    • [21] Dominski, Z. and Kole, R. (1991) Selection of splice sites in pre-mRNAs with short internal exons. Mol. Cell. Biol. 11, 6075-6083.
    • (1991) Mol. Cell. Biol. , vol.11 , pp. 6075-6083
    • Dominski, Z.1    Kole, R.2
  • 22
    • 0028290698 scopus 로고
    • Mitochondrial minicircle DNA supports plasmid replication and maintenance in nuclei of Trypanosoma brucei
    • [22] Metzenberg, S. and Agabian, N. (1994) Mitochondrial minicircle DNA supports plasmid replication and maintenance in nuclei of Trypanosoma brucei. Proc. Natl. Acad. Sci. USA 91, 5962-5966.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 5962-5966
    • Metzenberg, S.1    Agabian, N.2
  • 23
    • 0024345942 scopus 로고
    • Expression of a bacterial gene in a trypanosomatid protozoan
    • [23] Bellofatto, V. and Cross, G.A.M. (1989) Expression of a bacterial gene in a trypanosomatid protozoan. Science 244, 1167-1169.
    • (1989) Science , vol.244 , pp. 1167-1169
    • Bellofatto, V.1    Cross, G.A.M.2
  • 24
    • 0027054829 scopus 로고
    • In vivo import of firefly luciferase into the glycosomes of Trypanosoma brucei and mutational analysis of the C-terminal targeting signal
    • [24] Sommer, J.M., Cheng, Q.-L., Keller, G.-A. and Wang, C.C. (1992) In vivo import of firefly luciferase into the glycosomes of Trypanosoma brucei and mutational analysis of the C-terminal targeting signal. Mol. Biol. Cell 3, 749-759.
    • (1992) Mol. Biol. Cell , vol.3 , pp. 749-759
    • Sommer, J.M.1    Cheng, Q.-L.2    Keller, G.-A.3    Wang, C.C.4
  • 25
    • 0028329601 scopus 로고
    • RNA polymerase III-mediated transcription of the trypanosome U2 small nuclear RNA gene is controlled by both intragenic and extragenic regulatory elements
    • [25] Fantoni, A., Dare, A.O. and Tschudi, C. (1994) RNA Polymerase III-mediated transcription of the trypanosome U2 small nuclear RNA gene is controlled by both intragenic and extragenic regulatory elements. Mol. Cell. Biol. 14, 2021-2028.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 2021-2028
    • Fantoni, A.1    Dare, A.O.2    Tschudi, C.3
  • 26
    • 0027957778 scopus 로고
    • Identification of a small RNA that interacts with the 5′ splice site of the Trypanosoma brucei spliced leader RNA in vivo
    • [26] Watkins, K., Dungan, J. and Agabian, N. (1994) Identification of a small RNA that interacts with the 5′ splice site of the Trypanosoma brucei spliced leader RNA in vivo. Cell 76, 171-182.
    • (1994) Cell , vol.76 , pp. 171-182
    • Watkins, K.1    Dungan, J.2    Agabian, N.3
  • 28
    • 0026661825 scopus 로고
    • Trypanosoma brucei spliced-leader RNA methylations are required for trans splicing in vivo
    • [28] McNally, K.P. and Agabian, N. (1992) Trypanosoma brucei spliced-leader RNA methylations are required for trans splicing in vivo. Mol. Cell. Biol. 12, 4844-4851.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 4844-4851
    • McNally, K.P.1    Agabian, N.2
  • 29
    • 0025004279 scopus 로고
    • Spliced leader RNA sequences can substitute for the essential 5′ end of U1 RNA during splicing in a mammalian in vitro system
    • [29] Bruzik, J.P. and Steitz, J.A. (1990) Spliced leader RNA sequences can substitute for the essential 5′ end of U1 RNA during splicing in a mammalian in vitro system. Cell 62, 889-899.
    • (1990) Cell , vol.62 , pp. 889-899
    • Bruzik, J.P.1    Steitz, J.A.2
  • 30
    • 0026620494 scopus 로고
    • Spliced leader RNAs from lower eukaryotes are trans-spliced in mammalian cells
    • [30] Bruzik, J.P. and Maniatis, T. (1992) Spliced leader RNAs from lower eukaryotes are trans-spliced in mammalian cells. Nature 360, 692-695.
    • (1992) Nature , vol.360 , pp. 692-695
    • Bruzik, J.P.1    Maniatis, T.2
  • 31
    • 0027500141 scopus 로고
    • Species-specific signals for the splicing of a short Drosophila intron in vitro
    • [31] Guo, M., Lo, P.C.H. and Mount, S.M. (1993) Species-specific signals for the splicing of a short Drosophila intron in vitro. Mol. Cell. Biol. 13, 1104-1118.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 1104-1118
    • Guo, M.1    Lo, P.C.H.2    Mount, S.M.3
  • 32
    • 0025099394 scopus 로고
    • Splicing of a C. elegans myosin pre-mRNA in a human nuclear extract
    • [32] Ogg, S.C., Anderson, P. and Wickens, M.P. (1990) Splicing of a C. elegans myosin pre-mRNA in a human nuclear extract. Nucl. Acids Res. 18, 143-149.
    • (1990) Nucl. Acids Res. , vol.18 , pp. 143-149
    • Ogg, S.C.1    Anderson, P.2    Wickens, M.P.3
  • 33
    • 0023261748 scopus 로고
    • Splicing of plant pre-mRNAs in animal systems and vice versa
    • [33] van Santen, V.L. and Spritz, R.A. (1987) Splicing of plant pre-mRNAs in animal systems and vice versa. Gene 56. 253-265.
    • (1987) Gene , vol.56 , pp. 253-265
    • Van Santen, V.L.1    Spritz, R.A.2
  • 34
    • 0022818768 scopus 로고
    • Accurate in vitro splicing of two pre-mRNA plant introns in a HeLa cell nuclear extract
    • [34] Brown, J.W., Feix, G. and Frendewey, D. (1986) Accurate in vitro splicing of two pre-mRNA plant introns in a HeLa cell nuclear extract. EMBO J. 5, 2749-2758.
    • (1986) EMBO J. , vol.5 , pp. 2749-2758
    • Brown, J.W.1    Feix, G.2    Frendewey, D.3
  • 35
    • 0018868410 scopus 로고
    • Abnormal expression of a chromosomal rabbit β-globin gene in Saccharomyces cerevisiae
    • [35] Beggs, J.D., Berg, J.V.D., Ooyen, A.V. and Weissman, C. (1980) Abnormal expression of a chromosomal rabbit β-globin gene in Saccharomyces cerevisiae. Nature 283, 835-840.
    • (1980) Nature , vol.283 , pp. 835-840
    • Beggs, J.D.1    Berg, J.V.D.2    Ooyen, A.V.3    Weissman, C.4
  • 36
    • 0027451110 scopus 로고
    • Trans-splicing of nematode premessenger RNA
    • [36] Nilsen, T.W. (1993) Trans-splicing of nematode premessenger RNA. Ann. Rev. Microbiol. 47, 413-40.
    • (1993) Ann. Rev. Microbiol. , vol.47 , pp. 413-440
    • Nilsen, T.W.1
  • 37
    • 0027499237 scopus 로고
    • Conversion of a trans-spliced C. elegans gene into a conventional gene by introduction of a splice donor site
    • [37] Conrad, R., Liou, R. and Blumenthal, T. (1993) Conversion of a trans-spliced C. elegans gene into a conventional gene by introduction of a splice donor site. EMBO J. 12, 1249-55.
    • (1993) EMBO J. , vol.12 , pp. 1249-1255
    • Conrad, R.1    Liou, R.2    Blumenthal, T.3
  • 38
    • 0026000950 scopus 로고
    • RNA polymerase I can mediate expression of CAT and neo protein-coding genes in Trypanosoma brucei
    • [38] Rudenko, G., Chung, H.-M.M., Pham, V.P. and Van der Ploeg, L.H.T. (1991) RNA polymerase I can mediate expression of CAT and neo protein-coding genes in Trypanosoma brucei. EMBO J. 10, 3387-3397.
    • (1991) EMBO J. , vol.10 , pp. 3387-3397
    • Rudenko, G.1    Chung, H.-M.M.2    Pham, V.P.3    Van Der Ploeg, L.H.T.4
  • 39
    • 0026506353 scopus 로고
    • Gene expression in Leishmania: Analysis of essential 5′ DNA sequences
    • [39] Curotto de Lafaille, M.A., Laban, A. and Wirth, D.F. (1992) Gene expression in Leishmania: analysis of essential 5′ DNA sequences. Proc. Natl. Acad. Sci. USA 89, 2703-2707.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 2703-2707
    • Curotto De Lafaille, M.A.1    Laban, A.2    Wirth, D.F.3
  • 40
    • 0027233694 scopus 로고
    • A mutational analysis of the polypyrimidine tract of introns
    • [40] Roscigno, R.F., Weiner, M. and Garcia-Blanco, M.A. (1993) A mutational analysis of the polypyrimidine tract of introns. J. Biol. Chem. 268, 11222-11229.
    • (1993) J. Biol. Chem. , vol.268 , pp. 11222-11229
    • Roscigno, R.F.1    Weiner, M.2    Garcia-Blanco, M.A.3
  • 41
    • 0027984792 scopus 로고
    • Polypyrimidine tract sequences direct selection of alternative branch sites and influence protein binding
    • [41] Norton, P.A. (1994) Polypyrimidine tract sequences direct selection of alternative branch sites and influence protein binding. Nucl. Acids Res. 22, 3854-3860.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 3854-3860
    • Norton, P.A.1
  • 42
    • 0029055472 scopus 로고
    • Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins
    • [42] Singh, R., Valcárcel, J. and Green, M.R. (1995) Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins. Science 268, 1173-1176.
    • (1995) Science , vol.268 , pp. 1173-1176
    • Singh, R.1    Valcárcel, J.2    Green, M.R.3
  • 43
    • 0025026156 scopus 로고
    • Conserved sequences in the U2 snRNA-encoding genes of kinetoplastida do not include the putative branchpoint recognition region
    • [43] Tschudi, C. and Ullu, E. (1990) Conserved sequences in the U2 snRNA-encoding genes of kinetoplastida do not include the putative branchpoint recognition region. Gene 91, 71-77.
    • (1990) Gene , vol.91 , pp. 71-77
    • Tschudi, C.1    Ullu, E.2


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