메뉴 건너뛰기




Volumn 226, Issue 1, 1996, Pages 47-56

The influence of AUG codons in the hepatitis C virus 5' nontranslated region on translation and mapping of the translation initiation window

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CODON; CONTROLLED STUDY; GENE MAPPING; HEPATITIS C VIRUS; HUMAN; HUMAN CELL; PRIORITY JOURNAL; TRANSLATION INITIATION;

EID: 0030560807     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1996.0626     Document Type: Article
Times cited : (59)

References (39)
  • 1
    • 0029166747 scopus 로고
    • Interaction of polypyrimidine tract-binding protein with the 5′ noncoding region of the hepatitis C virus RNA genome and its functional requirement in internal initiation of translation
    • Ali, N., and Siddiqui, A. (1995). Interaction of polypyrimidine tract-binding protein with the 5′ noncoding region of the hepatitis C virus RNA genome and its functional requirement in internal initiation of translation. J. Virol. 69, 6367-6375.
    • (1995) J. Virol. , vol.69 , pp. 6367-6375
    • Ali, N.1    Siddiqui, A.2
  • 2
    • 0024377134 scopus 로고
    • Detection of antibody to hepatitis C virus in prospectively followed transfusion recipients with acute and chronic non-A, non-B hepatitis
    • Alter, H. J., Purcell, R. H., Shih, J. W., Melpolder, J. C., Houghton, M., Choo, Q., and Kuo, G. (1990). Detection of antibody to hepatitis C virus in prospectively followed transfusion recipients with acute and chronic non-A, non-B hepatitis. New Engl. J. Med. 321, 1494-1500.
    • (1990) New Engl. J. Med. , vol.321 , pp. 1494-1500
    • Alter, H.J.1    Purcell, R.H.2    Shih, J.W.3    Melpolder, J.C.4    Houghton, M.5    Choo, Q.6    Kuo, G.7
  • 3
    • 0026558155 scopus 로고
    • Dual initiation sites of protein synthesis on foot-and-mouth disease virus RNA are selected following internal entry and scanning of ribosomes in vivo
    • Belsham, G. J. (1992). Dual initiation sites of protein synthesis on foot-and-mouth disease virus RNA are selected following internal entry and scanning of ribosomes in vivo. EMBO J. 11, 1105-1110.
    • (1992) EMBO J. , vol.11 , pp. 1105-1110
    • Belsham, G.J.1
  • 4
    • 0026674719 scopus 로고
    • Secondary structure of the 5′ nontranslated regions of hepatitis C virus and pestiviruses genomic RNAs
    • Brown, E. A., Zhang, H., Ping, L., and Lemon, S. M. (1992). Secondary structure of the 5′ nontranslated regions of hepatitis C virus and pestiviruses genomic RNAs. Nucleic Acids Res. 20, 5041-5045.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 5041-5045
    • Brown, E.A.1    Zhang, H.2    Ping, L.3    Lemon, S.M.4
  • 5
    • 0026533752 scopus 로고
    • The sequence context of the initiation codon in the encephalomyocarditis virus leader modulates efficiency of internal translation initiation
    • Davies, M. V., and Kaufman, R. J. (1992). The sequence context of the initiation codon in the encephalomyocarditis virus leader modulates efficiency of internal translation initiation. J. Virol. 66, 1924-1932.
    • (1992) J. Virol. , vol.66 , pp. 1924-1932
    • Davies, M.V.1    Kaufman, R.J.2
  • 6
    • 0000233999 scopus 로고
    • Eukaryotic transient-expression system based on recombinant vaccinia virus that synthesizes bacteriophage T7 RNA polymerase
    • Fuerst, T. R., Niles, E. G., Studier, F. W., and Moss, B. (1986). Eukaryotic transient-expression system based on recombinant vaccinia virus that synthesizes bacteriophage T7 RNA polymerase. Proc. Natl. Acad. Sci. USA 83, 8122-8126.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 8122-8126
    • Fuerst, T.R.1    Niles, E.G.2    Studier, F.W.3    Moss, B.4
  • 7
    • 0024522801 scopus 로고
    • Structure and stability of mRNA synthesized by vaccinia virus-encoded bacteriophage T7 RNA polymerase in mammalian cells: Importance of the 5′ untranslated leader
    • Fuerst, T. R., and Moss, B. (1989). Structure and stability of mRNA synthesized by vaccinia virus-encoded bacteriophage T7 RNA polymerase in mammalian cells: Importance of the 5′ untranslated leader. J. Mol. Biol. 206, 333-348.
    • (1989) J. Mol. Biol. , vol.206 , pp. 333-348
    • Fuerst, T.R.1    Moss, B.2
  • 8
    • 0027230837 scopus 로고
    • Identification of the hepatitis A virus internal ribosome entry site: In vivo and in vitro analysis of bicistronic RNAs containing the HAV 5′ noncoding region
    • Glass, M. J., Ja, X., and Summer, D. F. (1993). Identification of the hepatitis A virus internal ribosome entry site: In vivo and in vitro analysis of bicistronic RNAs containing the HAV 5′ noncoding region. Virology 193, 842-852.
    • (1993) Virology , vol.193 , pp. 842-852
    • Glass, M.J.1    Ja, X.2    Summer, D.F.3
  • 9
    • 0027414062 scopus 로고
    • Characterization of the hepatitis C virus encoded serine proteinase: Determination of protein dependent polyprotein cleavage sites
    • Grakoui, A., McCourt, D. W., Wychowski, C., Feinstone, S. M., and Rice, C. M. (1993a). Characterization of the hepatitis C virus encoded serine proteinase: Determination of protein dependent polyprotein cleavage sites. J. Virol. 67, 2832-2843.
    • (1993) J. Virol. , vol.67 , pp. 2832-2843
    • Grakoui, A.1    McCourt, D.W.2    Wychowski, C.3    Feinstone, S.M.4    Rice, C.M.5
  • 10
    • 0027476809 scopus 로고
    • Expression and identification of hepatitis C virus polyprotein cleavage products
    • Grakoui, A., Wychowski, C., Lin, C., Feinstone, S. M., and Rice, C. M. (1993b). Expression and identification of hepatitis C virus polyprotein cleavage products. J. Virol. 67, 1385-1395.
    • (1993) J. Virol. , vol.67 , pp. 1385-1395
    • Grakoui, A.1    Wychowski, C.2    Lin, C.3    Feinstone, S.M.4    Rice, C.M.5
  • 11
    • 0026071871 scopus 로고
    • Characterization of the terminal regions of hepatitis C viral RNA: Identification of conserved sequences in the 5′ untranslated region and poly(A) tails at the 3′ end
    • Han, J. H., Shyamala, V., Richman, K. H., Brauer, M. B., Irvine, B., Urdea, M. S., Tekamp-Olson, P., Kuo, G., Choo, Q., and Houghton, M. (1991). Characterization of the terminal regions of hepatitis C viral RNA: Identification of conserved sequences in the 5′ untranslated region and poly(A) tails at the 3′ end. Proc. Natl. Acad. Sci. USA 88, 1711-1715.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 1711-1715
    • Han, J.H.1    Shyamala, V.2    Richman, K.H.3    Brauer, M.B.4    Irvine, B.5    Urdea, M.S.6    Tekamp-Olson, P.7    Kuo, G.8    Choo, Q.9    Houghton, M.10
  • 12
    • 0027163740 scopus 로고
    • Two distinct proteinase activities required for the processing of a putative non-structural precursor protein of hepatitis C virus
    • Hijikata, M., Mizushima, H., Akagi, T., Mori, S., Kakiuchi, N., Kato, M., Tanaka, T., Kimura, K., and Shimotohno, K. (1993). Two distinct proteinase activities required for the processing of a putative non-structural precursor protein of hepatitis C virus, J. Virol. 67, 4665-4675.
    • (1993) J. Virol. , vol.67 , pp. 4665-4675
    • Hijikata, M.1    Mizushima, H.2    Akagi, T.3    Mori, S.4    Kakiuchi, N.5    Kato, M.6    Tanaka, T.7    Kimura, K.8    Shimotohno, K.9
  • 13
    • 0029437960 scopus 로고
    • Internal initiation of translation in eukaryotes: The picornavirus paradigm and beyond
    • Jackson, R. J., and Kaminski, A. (1995). Internal initiation of translation in eukaryotes: The picornavirus paradigm and beyond. RNA 1, 985-1000.
    • (1995) RNA , vol.1 , pp. 985-1000
    • Jackson, R.J.1    Kaminski, A.2
  • 14
    • 0025668193 scopus 로고
    • Cap-independent translation of picornaviral mRNAs: Structure and function of the internal ribosomal entry site
    • Jang, S. K., and Wimmer, E. (1990). Cap-independent translation of picornaviral mRNAs: Structure and function of the internal ribosomal entry site. Enzyme 44, 292-309.
    • (1990) Enzyme , vol.44 , pp. 292-309
    • Jang, S.K.1    Wimmer, E.2
  • 15
    • 0025145263 scopus 로고
    • Initiation of encephalomyocarditis virus RNA translation: The authentic initiation site is not selected by a scanning mechanism
    • Kaminski, A., Howell, M. T., and Jackson, R. J. (1990). Initiation of encephalomyocarditis virus RNA translation: The authentic initiation site is not selected by a scanning mechanism. EMBO J. 9, 3753-3759.
    • (1990) EMBO J. , vol.9 , pp. 3753-3759
    • Kaminski, A.1    Howell, M.T.2    Jackson, R.J.3
  • 16
    • 0029397360 scopus 로고
    • Direct evidence that the polypyrimidine tract binding protein (PTB) is essential for internal initiation of translation of encephalomyocarditis virus RNA
    • Kaminski, A., Hunt, S. L., Patton, J. G., and Jackson, R. J. (1995). Direct evidence that the polypyrimidine tract binding protein (PTB) is essential for internal initiation of translation of encephalomyocarditis virus RNA. RNA 1, 924-938.
    • (1995) RNA , vol.1 , pp. 924-938
    • Kaminski, A.1    Hunt, S.L.2    Patton, J.G.3    Jackson, R.J.4
  • 18
    • 0024394362 scopus 로고
    • Context effects and inefficient initiation at non-AUG codons in eucaryotic cell-free translation systems
    • Kozak, M. (1989). Context effects and inefficient initiation at non-AUG codons in eucaryotic cell-free translation systems. Mol. Cell Biol. 9, 5073-5080.
    • (1989) Mol. Cell Biol. , vol.9 , pp. 5073-5080
    • Kozak, M.1
  • 19
    • 0025013589 scopus 로고
    • Functional analysis of the internal translation initiation site of foot-and-mouth disease virus
    • Kuhn, R., Luz, N., and Beck, E. (1990). Functional analysis of the internal translation initiation site of foot-and-mouth disease virus. J. Virol. 64, 4625-4631.
    • (1990) J. Virol. , vol.64 , pp. 4625-4631
    • Kuhn, R.1    Luz, N.2    Beck, E.3
  • 21
    • 0028931934 scopus 로고
    • Unusual folding regions and ribosome landing pad within hepatitis C virus and pestivirus RNAs
    • Le, S., Sonenberg, N., and Maizel, J. V., Jr. (1995). Unusual folding regions and ribosome landing pad within hepatitis C virus and pestivirus RNAs. Gene 154, 137-143.
    • (1995) Gene , vol.154 , pp. 137-143
    • Le, S.1    Sonenberg, N.2    Maizel J.V., Jr.3
  • 22
    • 0025983564 scopus 로고
    • In vitro mutational analysis of cis-acting RNA translational elements within the poliovirus type 2 5′ untranslated region
    • Meerovitch, K., Nicholson, R., and Sonenberg, N. (1991). In vitro mutational analysis of cis-acting RNA translational elements within the poliovirus type 2 5′ untranslated region. J. Virol. 65, 5895-5901.
    • (1991) J. Virol. , vol.65 , pp. 5895-5901
    • Meerovitch, K.1    Nicholson, R.2    Sonenberg, N.3
  • 23
    • 0025983155 scopus 로고    scopus 로고
    • Structural and functional analysis of the ribosome landing pad of poliovirus type 2: In vivo translation studies
    • Nicholson, R., Pelletier, J., Le, S., and Sonenberg, N. (1996). Structural and functional analysis of the ribosome landing pad of poliovirus type 2: In vivo translation studies. J. Virol. 65, 5886-5894.
    • (1996) J. Virol. , vol.65 , pp. 5886-5894
    • Nicholson, R.1    Pelletier, J.2    Le, S.3    Sonenberg, N.4
  • 24
    • 0023664886 scopus 로고
    • Translation initiation at an ACG triplet in mammalian cells
    • Peabody, D. S. (1987). Translation initiation at an ACG triplet in mammalian cells. J. Biol. Chem. 262, 11847-11851.
    • (1987) J. Biol. Chem. , vol.262 , pp. 11847-11851
    • Peabody, D.S.1
  • 26
    • 0028059874 scopus 로고
    • Starting window, a distinct element in the cap-independent internal initiation of translation of picornaviral RNA
    • Pilipenko, E. V., Gmyl, A. P., Maslova, S. V., Belov, G. A., Sinyakov, A. N., Huang, M., Brown, T. D. K., and Agol, V. I. (1994). Starting window, a distinct element in the cap-independent internal initiation of translation of picornaviral RNA. J. Mol. Biol. 241, 398-414.
    • (1994) J. Mol. Biol. , vol.241 , pp. 398-414
    • Pilipenko, E.V.1    Gmyl, A.P.2    Maslova, S.V.3    Belov, G.A.4    Sinyakov, A.N.5    Huang, M.6    Brown, T.D.K.7    Agol, V.I.8
  • 29
    • 0029016111 scopus 로고
    • Almost the entire 5′ non-translated region of hepatitis C virus is required for cap-independent translation
    • Rijnbrand, R., Bredenbeek, P., van der Straaten, T., Whetter, L., Inchauspe, G., Lemon, S., and Spaan, W. (1995). Almost the entire 5′ non-translated region of hepatitis C virus is required for cap-independent translation. FEBS Lett. 365, 115-119.
    • (1995) FEBS Lett. , vol.365 , pp. 115-119
    • Rijnbrand, R.1    Bredenbeek, P.2    Van Der Straaten, T.3    Whetter, L.4    Inchauspe, G.5    Lemon, S.6    Spaan, W.7
  • 31
    • 0023464708 scopus 로고
    • Vectors for selective expression of cloned DNAs by T7 RNA polymerase
    • Rosenberg, A. H., Lade, B. N., Chui, D.-S., Lin, S.-W., Dunn, J. J., and Studier, F. W. (1987). Vectors for selective expression of cloned DNAs by T7 RNA polymerase. Gene 56, 125-135.
    • (1987) Gene , vol.56 , pp. 125-135
    • Rosenberg, A.H.1    Lade, B.N.2    Chui, D.-S.3    Lin, S.-W.4    Dunn, J.J.5    Studier, F.W.6
  • 33
    • 0029027606 scopus 로고
    • Variation of the hepatitis C virus 5′ non-coding region: Implications for secondary structure, virus detection and typing
    • Smith, D. B., Mellor, J., Jarvis, L. M., Davidson, F., Kolberg, J., Urdea, M., Yap, P., Simmonds, P., and The International HCV Collaborative Study Group. (1995). Variation of the hepatitis C virus 5′ non-coding region: Implications for secondary structure, virus detection and typing. J. Gen. Virol. 76, 1749-1761.
    • (1995) J. Gen. Virol. , vol.76 , pp. 1749-1761
    • Smith, D.B.1    Mellor, J.2    Jarvis, L.M.3    Davidson, F.4    Kolberg, J.5    Urdea, M.6    Yap, P.7    Simmonds, P.8
  • 34
    • 0026513651 scopus 로고
    • Internal ribosome entry site within hepatitis C virus RNA
    • Tsukiyama-Kohara, K., Iizuka, N., Kohara, M., and Nomoto, A. (1992). Internal ribosome entry site within hepatitis C virus RNA. J. Virol. 66, 1476-1483.
    • (1992) J. Virol. , vol.66 , pp. 1476-1483
    • Tsukiyama-Kohara, K.1    Iizuka, N.2    Kohara, M.3    Nomoto, A.4
  • 35
    • 0025169833 scopus 로고
    • Intracellular transport of recombinant coronavirus spike proteins; Implication for virus assembly
    • Vennema, H., Heijnen, L., Zijderveld, A., Horzinek, M. C., and Spaan, W. J. M. (1990). Intracellular transport of recombinant coronavirus spike proteins; Implication for virus assembly. J. Virol. 64, 201-210.
    • (1990) J. Virol. , vol.64 , pp. 201-210
    • Vennema, H.1    Heijnen, L.2    Zijderveld, A.3    Horzinek, M.C.4    Spaan, W.J.M.5
  • 36
    • 0027153210 scopus 로고
    • Translation of human hepatitis C virus RNA in cultured cells is mediated by an internal ribosome binding mechanism
    • Wang, C., Sarnow, P., and Siddiqui, A. (1993). Translation of human hepatitis C virus RNA in cultured cells is mediated by an internal ribosome binding mechanism. J. Virol. 67, 3338-3344.
    • (1993) J. Virol. , vol.67 , pp. 3338-3344
    • Wang, C.1    Sarnow, P.2    Siddiqui, A.3
  • 37
    • 0028151477 scopus 로고
    • A conserved helical element is essential for internal initiation of translation of hepatitis C virus RNA
    • Wang, C., Sarnow, P., and Siddiqui, A. (1994). A conserved helical element is essential for internal initiation of translation of hepatitis C virus RNA. J. Virol. 68, 7301-7307.
    • (1994) J. Virol. , vol.68 , pp. 7301-7307
    • Wang, C.1    Sarnow, P.2    Siddiqui, A.3
  • 38
    • 0029331431 scopus 로고
    • An RNA pseudoknot is an essential structural element of the internal ribosome entry site located within the hepatitis C virus 5′ noncoding region
    • Wang, C., Le, S., Ali, N., and Siddiqui, A. (1995). An RNA pseudoknot is an essential structural element of the internal ribosome entry site located within the hepatitis C virus 5′ noncoding region. RNA 1, 526-537.
    • (1995) RNA , vol.1 , pp. 526-537
    • Wang, C.1    Le, S.2    Ali, N.3    Siddiqui, A.4
  • 39
    • 0027094172 scopus 로고
    • 5′ end dependent translation initiation of hepatitis C viral RNA and the presence of putative positive and negative translational control elements within the 5′ untranslated region
    • Yoo, B. J., Spaete, R. R., Geballe, A. P., Selby, M., Houghton, M., and Han, J. H. (1992). 5′ end dependent translation initiation of hepatitis C viral RNA and the presence of putative positive and negative translational control elements within the 5′ untranslated region. Virology 191, 889-899.
    • (1992) Virology , vol.191 , pp. 889-899
    • Yoo, B.J.1    Spaete, R.R.2    Geballe, A.P.3    Selby, M.4    Houghton, M.5    Han, J.H.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.