A new method for detecting pericentric inversions using COD-FISH

Cytogenetics and Cell Genetics

Volumn 75, Issue 4, 1996, Pages 248-253

  Bailey, S M ^a   Meyne, J ^a   Cornforth, M N ^b   McConnell, T S ^c   Goodwin, E H ^a  

^a LOS ALAMOS NATIONAL LABORATORY   (United States)

^b University of Texas Medical Branch School of Medicine   (United States)

^c UNIVERSITY OF NEW MEXICO SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

ARTICLE; CHROMOSOME ANALYSIS; DNA SEQUENCE; FLUORESCENCE IN SITU HYBRIDIZATION; HUMAN; HUMAN CELL; METHODOLOGY; PERICENTRIC CHROMOSOME INVERSION; PRIORITY JOURNAL;

CENTROMERE; CHROMATIDS; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN; DNA PROBES; DNA, SINGLE-STRANDED; FEMALE; FIBROBLASTS; HUMANS; IN SITU HYBRIDIZATION, FLUORESCENCE; INVERSION, CHROMOSOME; OLIGONUCLEOTIDE PROBES; TELOMERE;

EID: 0030514011     PISSN: 03010171     EISSN: 1424859X     Source Type: Journal    
DOI: 10.1159/000134494     Document Type: Article

References (33)

1. Angell RR, Jacobs PA: Lateral asymmetry in human constitutive heterochromatin. Chromosoma 51: 301-310 (1975).
2. Arnold A, Kim HG, Gaz RD, Eddy RL, Fukushima Y, Byers MG, Shows TB, Kronenberg HM: Molecular cloning and chromosomal mapping of DNA rearranged with the parathryoid hormone gene in a parathyroid adenoma. J clin Invest 83:2034-3040 (1989).
3. Bailey SM, Goodwin EH, Mcyne J, Comforth MN: CO-FISH reveals inversions associated with isochromosome formation. Mutagenesis 11:149-154 (1996).
4. Blackburn EH, Szostak J W: The molecular structure of centromeres and telomeres. Ann Rev Biochem 53:163-194 (1984).
5. Buroker N, Bestwick R, Haight G, Magcnis RE, Litt M: A hypervariablc repeated sequence on human chromosome lp36. Hum Genet 77:175-181 (1987).
6. Casperson T, Zech I, Johannson C, Modest EJ: Identification of human chromosomes by DNA-binding fluorescent agents. Chromosoma 30:215-227 (1970).
7. van Dekken H, Pinkel D, Mullikin J, Gray JV: Enzymatic production of single-stranded DNA as a target for fluorescence in situ hybridization. Chromosoma 97:1-5 (1988).
8. Fan Y, Davis LM, Shows TB: Mapping small DNA sequences by FISH directly on banded metaphase chromosomes. Proc natl Acad Sci, USA. 87:6223-6227 (1990).
9. Friedman E, Bale AE, Marx SJ, Norton JA, Arnold A, Tu T, Aurbach GD, Spiegel M: Genetic abnormalities in sporadic parathyroid adenomas. J clin Endocrinol Metab 71:293-297 (1990).
10. Goodwin EH, Mcyne J: Strand-specific FISH reveals orientation of chromosome 18 aiphoid DNA. Cy-togenet Cell Genet 63:126-127 (1993).
11. Goodwin EH, Meyne J, Bailey SM, Quigley D: On the origin of lateral asymmetry. Chromosoma 104: 345-347 (1996).
12. Goto K, Maeda S, Kano Y, Sugivama T: Factors involved in differential Giemsa-staining of sister chromatids. Chromosoma 66:351-359 (1978).
13. Havata I: Removal of stainable cytoplasmic substances from cytogenetic slide preparations. Biotechnic Histochcm 68:150-152 (1993).
14. Izquierdo LA, McConnell TS, Curet LB, Sarto GE: Recombinant 8 syndrome: the pool of Hispanic pericentric inversion 8 carriers expands numerically and geographically. Am.J Obstet Gynecol 165:1419-1422 (1991).
15. Johnson GD, Noguiera Aroujo GM: A simple method of reducing fading of immunofluorescence during microscopy. J immunol Meth 43:349-350 (1981).
16. Delange T, Shiue L, Myers RM, Cox DR, Naylor SL, Kiltery AM, Varmus HE: Structure and variability of human chromosome ends. Mol cell Biol 10:518-527 (1990).
17. Lalt SA: Microfluorometric detection of deoxyribonucleic acid replication in human metaphase chromosomes. Proc natl Acad Sci. USA 70:3395-3399 (1973).
18. Latt SA, Davidson RL: Lateral asymmetry in the fluorescence of human Y chromosomes stained with 33258 Hoechst. Expl Cell Res 87:425-429 (1974).
19. LeBeau MM, Larson RA, Bitter MA, Vardiman JW, Golomb HM, Rowley JD: Association of an inversion 16 with abnormal marrow eosinophils in acute myclomonocyte leukemia. N Engl J Med 309:630-636 (1983).
20. Lcmicux N, Dutrillaux B, Viegas-Pcquignol E: A simple method for simultaneous R- or G- banding and fluorescence in situ hybridization of small singlecopy genes. Cytogenel Cell Genet 59:311-312 (1992).
21. Lin MS, Alfi OS: Variation in lateral asymmetry' of human chromosome 1. Cytogenet Cell Genet 21:243-250 (1978).
22. Meyne J, Goodwin EH: Direction of DNA sequences within chromatids determined using strand-specific FISH. Chrom Res 3:375-378 (1995).
23. Meyne J, Littlefield LG, Moyzis RK: Labeling of human centromeres using aiphoid DNA consensus sequence: application to the scoring of chromosome aberrations. Mutat Res 226:75-79 (1989).
24. Meyne J, Moyzis RK: In situ hybridization using synthetic oligomers as probes for centromere and telomere repeats, in Choo, KHA (ed): Methods in Molecular Biology, Vol 33, pp 63-74 (Humana Press Inc., Totowa, NJ 1994).
25. Mirshra NC: Molecular Biology of Nucleases, pp 47-49 (CRC Press, New York 1995).
26. Moyzis RK, Buckingham JM, Cram LS, Dani M, Deav-en LL, Jones MD, Meyne J, Ratliff RL, Wu JR: A highly conserved repetitive DNA sequence, (TTAGGG), present at the telomeres of human chromosomes. Proc natl Acad Sci, USA 85:6622-6626 (1988).
27. Rosenberg CL, Kim HG, Shows TB, Kronenberg HM, Arnold A: Rearrangement and overexpression of D! 1S287E, a candidate oncogene on chromosome llql3 in benign parathyroid tumors. Oncogene 6:449-453 (1991).
28. Solomon E, Borrow J, Goddard AD: Chromosome aberrations and cancer. Science 254:1153-1160 (1991).
29. Sujansky E, Smith ACM, Peakman DC, McConnell TS, Baca P, Robinson A: Familial pericentric inversion of chromosome 8. Am J med Genet 10:229-235 (1981).
30. Taylor JH: Sister chromatid exchanges in tritium labeled chromosomes. Genetics 43:515-529 (1958).
31. Therman E: Human Chromosomes: Structure, Behavior, and Effects. 2nd Ed, pp 213-215 (Springer-Verlag, New York 1986).
32. Williams TM, McConnell TS, Martinez F, Smith A, Sujanski E: Clinicopathologic and dysmorphic findings in recombinant chromosome 8 syndrome. Hum Pathol 15:1080-1084(1984).
33. Zakhorov AF, Egolina NA: Differential spiralization along mammalian mitotic chromosomes. 1. BUdr-revealed differentiation in Chinese hamster chromosomes. Chromosoma 38:341-365 (1972).