The rapid and sensitive detection of plant pathogens by molecular methods

Australasian Plant Pathology

Volumn 25, Issue 2, 1996, Pages 71-85

  Randles, J W ^a   Hodgson, R A J ^a   Wefels, E ^a  

^a UNIVERSITY OF ADELAIDE   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0030486456     PISSN: 08153191     EISSN: None     Source Type: Journal    
DOI: 10.1071/AP96014     Document Type: Article

References (45)

1. Anon. (1995) - Proceedings, International Workshop on Sugarcane Germplasm Conservation and Exchange. Bureau of Sugar Experiment Stations, Brisbane.
2. Balali, G.R., Whisson, D.L., Scott, E.S. and Neate, S.M. (1995) - DNA fingerprinting probe specific to isolates of Rhizoctonia solani AG-3. Mycological Research (in press).
3. Barina, H.S., Shannon, A.L., Chu, P.W.G. and Waterhouse P. (1994) - Detection of five seedborne legume viruses in one sensitive multiplex polymerase chain reaction test. Phytopathology 84: 1201-1205.
4. Berger, R., Duncan, M.R. and Berman, B. (1993) - Nonradioactive gel mobility shift assay using chemiluminescent detection. Biotechniques 15: 650-651.
5. Beuther, E., Wiese, U., Lukács, N., van Slobbe, W.G. and Riesner, D. (1992) - Fatal yellowing of oil palms: search for viroids and double-stranded RNA. In Plant Diseases of Viral, Viroid, Mycoplasma and Uncertain Etiology (Ed K. Maramorosch), pp. 19-43. Westview Press, Boulder.
6. Broadbent, P. (1995) - Quarantine in relation to Australian citrus imports and exports. Australasian Plant Pathology 24: 145-156.
7. Choi, Y.-G. and Randles, J.W. (1995) - Studies on the etiology of sugarcane striate mosaic disease. Proceedings, 10th Biennial Australasian Plant Pathology Society Conference. Christchurch.
8. Coddington, A. and Gould, D.S. (1992) - Use of RFLPs to identify races of fungal pathogens. In Techniques for the Rapid Detection of Plant Pathogens (Eds J.M. Duncan and L. Torrance), pp. 162-176. Blackwell Scientific Publications, Oxford.
9. Cordero, M.J., Murilo, I., Arroyo, D., Eritja, R. and San Segundo, B. (1994) - Use of oligonucleotide-alkaline phosphatase conjugates as non-radioactive probes for rapid analysis of a proteinase inhibitor gene from Zea mays. Plant Molecular Biology Reporter 12: 265-273.
10. Dodds, J.A. (1993) - dsRNA in diagnosis. In Diagnosis of Plant Virus Diseases (Ed R.E.F. Matthews), pp. 273-294. CRC Press, Boca Raton.
11. Goodman, R.N., Kiraly, Z. and Wood, K.R. (1986) - The Biochemistry and Physiology of Plant Disease. University of Missouri Press, Columbia.
12. Graddon, D.J. and Randles, J.W. (1986) - Single antibody dot immunoassay - a simple technique for rapid detection of a plant virus. Journal of Virological Methods 13: 63-69.
13. Hadidi, A., Levy, L. and Podleckis, E.V. (1995) - Polymerase chain reaction technology in plant pathology. In Molecular Methods in Plant Pathology (Eds R.P.Singh and U.S.Singh), pp. 167-187. CRC Press, Boca Raton.
14. Hames, B.D. and Higgins, S.J. (1985) - Nucleic Acid Hybridisation: a Practical Approach. IRL Press, Oxford.
15. Hampton, R.O., Kraft, J.M. and Muehlbauer, F.J. (1993) - Minimising the threat of seedborne pathogens in crop germplasm: elimination of pea seedborne mosaic virus from the USDA-ARS germplasm collection of Pisum sativuni. Plant Disease 77: 220-224.
16. Hanold, D. and Randles, J.W. (1991) - Detection of coconut cadang-cadang viroid-like sequences in oil and coconut palm and other monocotyledons in the South-West Pacific. Annals of Applied Biology 118:-139-151.
17. Harlow, E. and Lane, D. (1988) - Antibodies: a Laboratory Manual. Cold Spring Harbor Laboratory Press, New York.
18. Hodgson, R.A.J. and Randles, J.W. (1994) - Methods for identifying viroids in coconuts and other commercially important palms. In Coconut Improvement in the South Pacific (Eds M.A. Foale and P.W. Lynch), pp. 47-54. ACIAR Proceedings No. 53.
19. Hull, R. (1993) - Nucleic acid hybridization procedures. In Diagnosis of Plant Virus Diseases (Ed R.E.F. Matthews), pp. 253-271. CRC Press, Boca Raton.
20. Kawasaki, E., Saiki, R and Erlich, H. (1993) - Genetic analysis using polymerase chain reaction-amplified DNA and immobilised oligonucleotide probes: reverse dot-blot typing. Methods in Enzymology 218: 369-381.
21. Keller, G.H. and Manak, M.M. (1993) - DNA Probes. Stockton Press, New York.
22. Lane, L.C. (1992) - A general method for detecting plant viruses. In Plant Diseases of Viral, Viroid, Mycoplasma and Uncertain Etiology (Ed K. Maramorosch), pp. 1-17. Westview Press, Boulder.
23. Lee, I.-M., Hammond, R.W., Davis, R.E. and Gundersen, D.E.(1993) - Universal amplification and analysis of pathogen 16S rDNA for classification and identification of mycoplasmalike organisms. Phytopathology 83: 834-842.
24. Liddell, E. and Weeks, I. (1995) - Antibody Technology. BIOS Scientific Publishers, Oxford.
25. Ligat, J.S., Cartwright, D.N. and Randles, J.W. (1991) - Comparison of some pea seed-borne mosaic isolates and their detection by dot-immunobinding assay. Australian Journal of Agricultural Research 42: 441-451.
26. Lin, N.S., Hsu, Y.H. and Hsu, H.T. (1990) - Immunological detection of plant viruses and a mycoplasmalike organism by direct tissue blotting on nitrocellulose membranes. Phytopathology 80: 824-828.
27. Livak, K.J., Flood, S.J.A., Marmaro, J., Giusti, W. and Deetz, K. (1995) - Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization. PCR Methods and Applications 4: 357-362.
28. Matthews, R.E.F.(1991) - Plant Virology. Academic Press, New York.
29. Milne, R.G. (1993) - Electron microscopy of in vitro preparations. In Diagnosis of Plant Virus Diseases (Ed R.E.F. Matthews), pp. 215-251. CRC Press, Boca Raton.
30. Murphy, F.A., Fauquet, C.M., Bishop, D.H.L., Ghabrial, S.A., Jarvis, A.W., Martelli, G.P., Mayo, M.A. and Summers, M.D. (1995) - Virus Taxonomy: Sixth Report of the International Committee on Taxonomy of Viruses. Springer-Verlag, Wien.
31. Palukaitis, P., Roossinck, M.J. and García-Arenal, F. (1994) - Applications of ribonuclease protection assay in plant virology. Methods in Molecular Genetics 4: 237-249.
32. Pearson, M.N., Thomas, J.E. and Randles, J.W.(1994) - Detection of an unidentified potyvirus from Roystonea regia palm using the polymerase chain reaction and degenerate, potyvirus specific, primers and potential problems arising from the amplification of host plant DNA sequences. Journal of Virological Methods 50: 211-218.
33. Rafalski, A., Tingey, S. and Williams, J.G.K. (1994) - Random amplified polymorphic DNA (RAPD) markers. In Plant Molecular Biology Manual (Eds S.B. Gelvin and R.A. Schilperoort), H4: 1-8. Kluwer, Belgium.
34. Randles, J.W.(1993) - Strategies for implicating virus-like pathogens as the cause of diseases of unknown etiology. In Diagnosis of Plant Virus Diseases (Ed R.E.F. Matthews), pp. 315-332. CRC Press, Boca Raton.
35. Rouhiainen, L., Laaksonen, M., Karjalainen, R. and S̈derlund, H. (1991) - Rapid detection of a plant virus by solution hybridization using oligonucleotide probes. Journal of Virological Methods 34: 81-90.
36. Thomson, D. and Dietzgen, R.G. (1995) - Detection of DNA and RNA plant viruses by PCR and RT-PCR using a rapid virus release protocol without tissue homogenisation. Journal of Virological Methods 54: 85-95.
37. Turano, B. and Humphreys, T. (1994) - Quantitative determination of phosphorothioate-modified oligodeoxyribonucleotide persistence. Biotechniques 17: 266-267.
38. Van der Plank, J.E. (1963) - Plant Diseases: Epidemics and Control. Academic Press, New York.
39. Van Regenmortel, M.H.V. (1982) -Serology and Immunochemistry of Plant Viruses. Academic Press, New York.
40. Van Regenmortel, M.H.V. and Dubs, M.C. (1993) - Serological procedures. In Diagnosis of Plant Virus Diseases (Ed R.E.F.Matthews), pp. 159-214. CRC Press,Boca Raton.
41. Vernier, P., Mastrippolito, R., Helin, C., Bendali, B., Mallet, J. and Tricoire, H. (1996) - Radioimager quantification of oligonucleotide hybridisation with DNA immobilised on transfer membrane: application to the identification of related sequences. Analytical Biochemistry 235: 11-19.
42. Wilkins, R.J. (1993) - Allele-specific oligonucleotide probes for mRNA. Biotechniques 14: 352-354.
43. Winn-Deen, E.S. (1996) - Multi-mutation screening using PCR and ligation - principles and applications. Tibtech 14: 112-114.
44. Woolf, T.M., Melton, D.A. and Jennings, C.G.B. (1992) - Specificity of antisense oligonucleotides in vivo. Proceedings, National Academy of Sciences, USA 89: 7305-7309.
45. Zola, H. (1995) - Monoclonal Antibodies: the Second Generation. BIOS Scientific Publications, Oxford.