Characterization of ribosomal RNA intergenic spacer region of several seedborne bacterial pathogens of rice

Seed Science and Technology

Volumn 24, Issue 3, 1996, Pages 571-580

  Kim, H M ^a   Song, W Y ^a  

^a Chonbuk National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ACIDOVORAX AVENAE; BACTERIA (MICROORGANISMS); ERWINIA; PANTOEA AGGLOMERANS; PSEUDOMONAS; PSEUDOMONAS FUSCOVAGINAE; PSEUDOMONAS SYRINGAE PV. SYRINGAE; XANTHOMONAS; XANTHOMONAS ORYZAE PV. ORYZAE;

EID: 0030475477     PISSN: 02510952     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (30)

1. Adhikari, T. B., Vera Cruz, C M., Zhang, Q, Nelson, R. J., Skinner, D. Z., Mew, T. W. and Leach, J. E. (1995). Genetic diversity of Xanthomonas oryzae pv. oryzae in Asia. Applied and Environmental Microbiology, 61, 966-971.
2. Barry, T, Coheyan, G., Glennon, M., Dunican, L. K., and Gannon, F. (1991). The 16S-23S ribosomal spacer region as a target for DNA probes to identify eubacteria. PCR Methods and Applications, 1, 51-56.
3. Chien, C C. and Shieh, L. J. (1989). Pathogenic groups of Xanthomonas oryzae pv. oryzae in Taiwan. I Studies on the differential varieties of rice. Journal of Agricultural Research of China, 83, 216-228
4. Choi, Y. C., Kim, K. C. and Cho, B H. (1989). Plea browning disease of rice caused by Erwinia herbicola and ice nucleation activity of the pathogenic bacterium. Korean Journal of Plant Pathology, 5, 72-79.
5. De Faira, J. C. and Prabhu, A. S. (1984). Brown Stripe (Bst), a new bacterial disease on rice. International Rice Research Newsletter, 9, 12.
6. Di, M., Ye, H., Schaad, N. W. and Roth, D. A. (1991). Selective recovery Xanthomonas spp. from rice seed. Phytopathology, 81, 1358-1363.
7. George, M. L. Cruz, W T. and Nelson, R. J. (1994). DNA fingerprinting of Xanthomonas oryzae pv. oryzae by ligation-mediated polymerase chain reaction. International Rice Research Newsletter, 19, 29-30.
8. Goto, M. (1965). A comparative study of the sheath rot bacteria of rice. Annals of Phytopathological Society of Japan, 30, 42-45.
9. Hwang, I. G. and Cho, Y. S. (1986). Preservation methods of Xanthomonas campestris pv. oryzae in relation to virulence and colony-type variation. Korean Journal of Plant Pathology, 2, 150-157
10. Jensen, M. A., Webster, J. H. and Straus, N. (1993). Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphism. Applied and Environmental Microbiology, 59, 945-952.
11. Kadota, I. and Ohuchi, A. (1983) Symptoms of bacterial brown stripe of rice seedlings in nursery boxes. Annals of Phytopathological Society of Japan, 49, 561-564.
12. Kim, H. M., Song, W. Y., So, I. Y. and Lee, D. G 1994. A selective medium for the isolation of Xanthomonas campestris pv. oryzae from rice seed. Korean Journal of Plant Pathology, 10, 13-17.
13. Kim, H. M., Song, W. Y and Schaad, N. W. (1993). A selective medium for the isolation of Pseudomonas glumae from rice seeds Korean Journal of Plant Pathology, 9, 248-251.
14. Klement, A. (1955). A new bacterial disease of rice caused by Pseudomonas oryzicola n sp. Acta Microbiol. Acad. Sci. Nung., 2, 265-274.
15. Leach, J. E., Rhoads, M. L., Vera Cruz, C. M. White, F. F., Mew, T. W and Leung, H. (1992) Assessment of genetic diversity and population structure of Xanthomonas oryzae pv. oryzae with a repetitive DNA element Applied and Environmental Microbiology, 58, 2188-2195
16. Lee, D K., Seo, J. H., Choi, J. E., Park, K. H., and Bae, S. H. (1986). Pathotypes of Xanthomonas campestris pv. oryzae in Honam district, Korea. Korean Journal of Plant Pathology, 2, 102-106.
17. Maniatis, T., Fritsch, E. F. and Sambrook, J. (1982). Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
18. Noda, T., Horino, O., Ohuchi, A. (1990). Variability of pathogenicity in races of Xanthomonas campestris pv oryzae in Japan. Japan Agricultural Research, 23, 182-189
19. Nakagawa, T., Shimada, M., Mukai, H., Asada, K, Kato, I., Fujino, K. and Sato, T. (1994). Detection of alcohol-tolerant Hiochi bacteria by PCR. Applied and Environmental Microbiology, 60, 637-640.
20. Prosen, D. Hatziloukas, Z., Schaad, N. W. and Panopoulous, N J. (1993). Specific detection of Pseudomonas syringae pv. phaseolicola DNA in bean seed by polymerase chain reaction-based amplification of a phaseolotoxin gene region. Phytopathology, 83, 965-970.
21. Reddy, M. T S and Reddy, A. P. K. (1990) Viability in Xanthomonas campestris pv. oryzae and their relationship to physiological characters Annals of Agricultural Research, 11, 283-290.
22. Sahu, R. K. and Sahu, V. N (1988). Pathotype grouping of Xanthomonas campestris pv. oryzae isolates of Madhya Pradesh. Madras Agricultural Journal, 75, 9-10
23. Schaad, N. W. 1989. Initial identification of common genera. pp. 1-5. In Laboratory Guide for Identification of Plant Pathogenic Bacteria ed. by N. W. Schaad, American Phytopathological Society. St. Paul, Minnesota.
24. Schaad, N W., Kado, C. I and Summer, D R. 1975. Synonymy of Pseudomonas avenue Manns 1905 and Pseudomonas alboprecipitans Rosen 1922. International Journal of Systemic Bacteriology, 25, 133-137.
25. Singh, R. A. and Rao, M. H. S. (1977). A simple technique for detecting Xanthomonas oryzae in rice seeds. Seed Science and Technology, 5, 123-127
26. Tanii, A., Baba, T. and Haruki, T (1974). Bacteria isolated from black rot of rice grains. Annals of Phytopathological Society of Japan, 40, 309-318.
27. Tominaga, T., Kimura, K. and Goh, N. (1981). Bacterial brown stripe of rice in nursery box, caused by Pseudomonas avenae. Annals of Phytopathological Society of Japan, 49, 92.
28. Tsushima, S. and Wakimoto, S (1986). Medium for detecting Pseudomonas glumae Kurita et Tabei, the causal bacterium of grain rot of rice. Annals of Phytopathological Society of Japan, 52, 253-259.
29. Vera Cruz, C. M., Gosselle, F., Kersters, K., Segers, P, van den Mooter, M., Swings, J. and De Ley, J. (1984). Differentiation between Xanthomonas campestris pv. oryzae, Xanthomonas campestris pva oryzicola and the bacterial 'brown blotch' pathogen on rice by numerical analysis of phenotypic features and protein gel electrophoresis. Journal of General Microbiology, 130, 2983-2999.
30. Zeigler, R. S. and Alvarez, E. (1990). Characteristics of Pseudomonas spp. causing grain discoloration and sheath rot of rice, and associated pseudomonad epiphytes. Plant Disease, 74, 917-922