메뉴 건너뛰기




Volumn 5, Issue 12, 1996, Pages 2485-2493

Crystal structure of the coat protein from the GA bacteriophage: Model of the unassembled dimer

Author keywords

bacteriophage coat protein; crystal structure; RNA hairpin; translational repressor; virus

Indexed keywords

COAT PROTEIN; SINGLE STRANDED DNA;

EID: 0030464973     PISSN: 09618368     EISSN: None     Source Type: Journal    
DOI: 10.1002/pro.5560051211     Document Type: Article
Times cited : (15)

References (41)
  • 1
    • 0024553310 scopus 로고
    • Nucleotide sequence from the ssRNA bacteriophage JP34 resolves the discrepancy between serological and biophysical classification
    • Adhin MR, Hirashima A, van Duin J. 1989. Nucleotide sequence from the ssRNA bacteriophage JP34 resolves the discrepancy between serological and biophysical classification. Virology 170:238-242.
    • (1989) Virology , vol.170 , pp. 238-242
    • Adhin, M.R.1    Hirashima, A.2    Van Duin, J.3
  • 2
    • 0000913086 scopus 로고
    • A fast algorithm for rendering space-filling molecule pictures
    • Bacon DJ, Anderson WF. 1988. A fast algorithm for rendering space-filling molecule pictures. J Mol Graphics 6.219-220.
    • (1988) J Mol Graphics , vol.6 , pp. 219-220
    • Bacon, D.J.1    Anderson, W.F.2
  • 3
    • 0024264659 scopus 로고
    • Ribonucleoprotein complexes of R17 coat protein and translational operator analog
    • Beckett D, Uhlenbeck OC. 1988. Ribonucleoprotein complexes of R17 coat protein and translational operator analog. J Mol Biol 204:927-938.
    • (1988) J Mol Biol , vol.204 , pp. 927-938
    • Beckett, D.1    Uhlenbeck, O.C.2
  • 4
    • 0015408416 scopus 로고
    • Nucleotide sequence at the binding site for coat protein on RNA of bacteriophage R17
    • Bernardi A, Spahr PF. 1972. Nucleotide sequence at the binding site for coat protein on RNA of bacteriophage R17. Proc Natl Acad Sci USA 69:3033-3037.
    • (1972) Proc Natl Acad Sci USA , vol.69 , pp. 3033-3037
    • Bernardi, A.1    Spahr, P.F.2
  • 5
    • 19244387062 scopus 로고
    • Sequence of the genes coding for the A-protein and the coat protein of bacteriophage fr
    • Berzin V, Avots A, Jansone I, Gintnere L, Tsimarus A. 1987. Sequence of the genes coding for the A-protein and the coat protein of bacteriophage fr. Nucleic Acids Res 75:6741.
    • (1987) Nucleic Acids Res , vol.75 , pp. 6741
    • Berzin, V.1    Avots, A.2    Jansone, I.3    Gintnere, L.4    Tsimarus, A.5
  • 6
    • 0021470578 scopus 로고
    • OMITMAP: An electron density map suitable for the examination of error in a macromolecular model
    • Bhat TN, Cohen GH. 1984. OMITMAP: An electron density map suitable for the examination of error in a macromolecular model. J Appl Crystallogr 17:244-248.
    • (1984) J Appl Crystallogr , vol.17 , pp. 244-248
    • Bhat, T.N.1    Cohen, G.H.2
  • 7
    • 0024279342 scopus 로고
    • Crystallographic refinement by simulated annealing: Application to a 2.8 Å resolution structure of aspartate aminotransferase
    • Brünger AT. 1988. Crystallographic refinement by simulated annealing: Application to a 2.8 Å resolution structure of aspartate aminotransferase. J Mol Biol 203:803-816.
    • (1988) J Mol Biol , vol.203 , pp. 803-816
    • Brünger, A.T.1
  • 8
    • 84944812221 scopus 로고
    • Extension of molecular replacement: A new search strategy based on Patterson correlation refinement
    • Brünger AT. 1990. Extension of molecular replacement: A new search strategy based on Patterson correlation refinement. Acta Crystallogr A 46:46-57.
    • (1990) Acta Crystallogr A , vol.46 , pp. 46-57
    • Brünger, A.T.1
  • 10
    • 0028103275 scopus 로고
    • Collaborative Computation Project Number 4. The CCP4 Suite: Programs for protein crystallography
    • CCP4.
    • CCP4. 1994. Collaborative Computation Project Number 4. The CCP4 Suite: Programs for protein crystallography. Acta crystallogr D50:760-763.
    • (1994) Acta Crystallogr , vol.D50 , pp. 760-763
  • 11
    • 0017235043 scopus 로고
    • Complete nucleotide sequence of bacteriophage MS2 RNA: Primary and secondary structure of the replicase gene
    • Fiers W et al., 1976. Complete nucleotide sequence of bacteriophage MS2 RNA: Primary and secondary structure of the replicase gene. Nature 260:500-507
    • (1976) Nature , vol.260 , pp. 500-507
    • Fiers, W.1
  • 14
    • 0027140498 scopus 로고
    • The refined structure of bacteriophage MS2 at 2.8 Å resolution
    • Golmohammadi R, Valegård K, Fridborg K, Liljas L. 1993. The refined structure of bacteriophage MS2 at 2.8 Å resolution. J Mol Biol 254:620-639.
    • (1993) J Mol Biol , vol.254 , pp. 620-639
    • Golmohammadi, R.1    Valegård, K.2    Fridborg, K.3    Liljas, L.4
  • 15
    • 0026409920 scopus 로고
    • RNA binding properties of the coat protein from bacteriophage GA
    • Gott JM, Wilhelm LJ, Uhlenbeck OC. 1991. RNA binding properties of the coat protein from bacteriophage GA. Nucleic Acids Res 19:6499-6503.
    • (1991) Nucleic Acids Res , vol.19 , pp. 6499-6503
    • Gott, J.M.1    Wilhelm, L.J.2    Uhlenbeck, O.C.3
  • 16
    • 0022881384 scopus 로고
    • Characterization of an intergroup serological mutant from group II RNA phage GA
    • Harigai H, Furuse K, Inokuchi Y, Hirashima A. 1986. Characterization of an intergroup serological mutant from group II RNA phage GA. Microbiol Immunol 30:1247-1257.
    • (1986) Microbiol Immunol , vol.30 , pp. 1247-1257
    • Harigai, H.1    Furuse, K.2    Inokuchi, Y.3    Hirashima, A.4
  • 17
    • 0022333121 scopus 로고
    • Stereochemically restrained refinement of macrornolecular structures
    • Hendrickson WA. 1985. Stereochemically restrained refinement of macrornolecular structures. Methods Enzymol 115:252-270.
    • (1985) Methods Enzymol , vol.115 , pp. 252-270
    • Hendrickson, W.A.1
  • 18
    • 0022326269 scopus 로고
    • Software for a diffractometer with multiwire area detector
    • Howard AJ, Nielsen C, Xuong NH. 1985. Software for a diffractometer with multiwire area detector. Methods Enzymol 114:452-472.
    • (1985) Methods Enzymol , vol.114 , pp. 452-472
    • Howard, A.J.1    Nielsen, C.2    Xuong, N.H.3
  • 20
    • 0000356656 scopus 로고
    • A graphics model building and refinement system for macromolecules
    • Jones TA. 1978. A graphics model building and refinement system for macromolecules. J Appl Crystallogr 11:268-272.
    • (1978) J Appl Crystallogr , vol.11 , pp. 268-272
    • Jones, T.A.1
  • 21
  • 22
    • 0028060580 scopus 로고
    • Mutations that increase the affinity of a transnational repressor for RNA
    • Lim F, Peabody DS. 1994. Mutations that increase the affinity of a transnational repressor for RNA. Nucleic Acids Res 22:3748-3752.
    • (1994) Nucleic Acids Res , vol.22 , pp. 3748-3752
    • Lim, F.1    Peabody, D.S.2
  • 23
    • 0028292548 scopus 로고
    • Altering the RNA binding specificity of a translational repressor
    • Lim F, Spingola M, Peabody DS. 1994. Altering the RNA binding specificity of a translational repressor. J Biol Chem 269:9006-9010.
    • (1994) J Biol Chem , vol.269 , pp. 9006-9010
    • Lim, F.1    Spingola, M.2    Peabody, D.S.3
  • 24
    • 0028057108 scopus 로고
    • Raster 3D version 2.0. A program for photorealistic molecular graphics
    • Merritt EA, Murphy MEP. 1994. Raster 3D version 2.0. A program for photorealistic molecular graphics Acta Crystallogr D 50:869-873.
    • (1994) Acta Crystallogr D , vol.50 , pp. 869-873
    • Merritt, E.A.1    Murphy, M.E.P.2
  • 25
    • 0029644408 scopus 로고
    • Crystal structure of the MS2 coat protein dimer: Implications for RNA binding and virus assembly
    • Ni CZ, Syed R, Kodandapani R, Wickersham J, Peabody DS, Ely KR. 1995. Crystal structure of the MS2 coat protein dimer: Implications for RNA binding and virus assembly. Structure 3:255-263.
    • (1995) Structure , vol.3 , pp. 255-263
    • Ni, C.Z.1    Syed, R.2    Kodandapani, R.3    Wickersham, J.4    Peabody, D.S.5    Ely, K.R.6
  • 26
    • 0027404265 scopus 로고
    • The RNA binding site of bacteriophage MS2 coat protein
    • Peabody DS. 1993. The RNA binding site of bacteriophage MS2 coat protein. EMBO J 12:595-600.
    • (1993) EMBO J , vol.12 , pp. 595-600
    • Peabody, D.S.1
  • 27
    • 0026577063 scopus 로고
    • Control of translational repression by protein-protein interactions
    • Peabody DS, Ely KR. 1992. Control of translational repression by protein-protein interactions. Nucleic Acids Res 20:1649-1655.
    • (1992) Nucleic Acids Res , vol.20 , pp. 1649-1655
    • Peabody, D.S.1    Ely, K.R.2
  • 32
    • 0027508172 scopus 로고
    • Effects of amino acid substitution on the thermal stability of MS2 capsids lacking genomic RNA
    • Storehouse NJ, Stockley PG. 1993. Effects of amino acid substitution on the thermal stability of MS2 capsids lacking genomic RNA. FEBS Lett 334:355-389.
    • (1993) FEBS Lett , vol.334 , pp. 355-389
    • Storehouse, N.J.1    Stockley, P.G.2
  • 34
    • 0002849539 scopus 로고
    • Analytical and production seeding techniques
    • Stura EA, Wilson IA. 1990. Analytical and production seeding techniques. Methods Enzymol 1:38-49.
    • (1990) Methods Enzymol , vol.1 , pp. 38-49
    • Stura, E.A.1    Wilson, I.A.2
  • 35
    • 0025344593 scopus 로고
    • The three-dimensional structure of the bacterial virus MS2
    • Valegård K, Liljas L, Fridborg K, Unge T. 1990. The three-dimensional structure of the bacterial virus MS2. Nature 545:36-41.
    • (1990) Nature , vol.545 , pp. 36-41
    • Valegård, K.1    Liljas, L.2    Fridborg, K.3    Unge, T.4
  • 39
    • 0014144558 scopus 로고
    • Ammo acid sequence studies on the tryptic peptides of the coat protein of the bacteriophage R17
    • Weber H. 1967. Ammo acid sequence studies on the tryptic peptides of the coat protein of the bacteriophage R17. Biochemistry 6:3144-3146.
    • (1967) Biochemistry , vol.6 , pp. 3144-3146
    • Weber, H.1
  • 40
    • 0007221922 scopus 로고
    • Amino acid sequence of the f2 coat protein
    • Weber K, Königsberg W. 1967. Amino acid sequence of the f2 coat protein. J Biol Chem 242:3563-3578.
    • (1967) J Biol Chem , vol.242 , pp. 3563-3578
    • Weber, K.1    Königsberg, W.2
  • 41
    • 0014176124 scopus 로고
    • Coat proteins of strains of two RNA viruses: Comparison of their amino acid sequences
    • Wittmann-Liebold B, Wittmann HG. 1967. Coat proteins of strains of two RNA viruses: Comparison of their amino acid sequences. Mol Gen Genet 100:358-363.
    • (1967) Mol Gen Genet , vol.100 , pp. 358-363
    • Wittmann-Liebold, B.1    Wittmann, H.G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.