Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SIMAPc

EMBO Journal

Volumn 15, Issue 24, 1996, Pages 7129-7136

  Henry, R William ^a   Ma, Beicong ^a,b   L sadowski, Cynthia ^c   Kobayashi, Ryuji ^a   Hernandez, Nouria ^a,b  

^a Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

^b HOWARD HUGHES MEDICAL INSTITUTE   (United States)

^c NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Proximal sequence element; RNA polymerase; SNAP50; SNRNA transcription; TBP

Indexed keywords

ANTIBODY; COMPLEMENTARY DNA; DNA DIRECTED RNA POLYMERASE III; POLYPEPTIDE; PROTEIN SUBUNIT; RNA POLYMERASE II; SMALL NUCLEAR RIBONUCLEOPROTEIN; TATA BINDING PROTEIN; ZINC FINGER PROTEIN;

ARTICLE; CONTROLLED STUDY; HUMAN; HUMAN CELL; IMMUNOPRECIPITATION; MOLECULAR CLONING; OPEN READING FRAME; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; PROTEIN CROSS LINKING; PROTEIN PROTEIN INTERACTION; PROTEIN PURIFICATION; TATA BOX; TRANSCRIPTION REGULATION; ULTRAVIOLET RADIATION;

AMINO ACID SEQUENCE; BASE SEQUENCE; CLONING, MOLECULAR; DNA, COMPLEMENTARY; DNA-BINDING PROTEINS; HUMANS; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; PROTEINS; RNA POLYMERASE II; RNA POLYMERASE III; RNA, SMALL NUCLEAR; RNA-BINDING PROTEINS; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

EID: 0030462565     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1002/j.1460-2075.1996.tb01104.x     Document Type: Article

References (45)

1. Berg,J.M. and Shi,Y. (1996) The galvanization of biology: a growing appreciation for the roles of zinc. Science, 271, 1081-1085.
2. Bernues,J., Simmen,K.A., Lewis,J.D., Gunderson,S.I., Polycarpou-Schwarz,M., Moncollin,V., Egly,J.-M. and Mattaj,I.W. (1993) Common and unique transcription factor requirements of human U1 and U6 snRNA genes. EMBO J., 12, 3573-3585.
3. Buratowski,S. and Zhou,H. (1992) A suppressor of TBP mutations encodes an RNA polymerase III transcription factor with homology with TFIIB. Cell, 71, 221-230.
4. Burley,S.K. and Roeder,R.G. (1996) Biochemistry and structural biology of transcription factor IID (TFIID). Annu. Rev. Biochem., 65, 769-799.
5. Colbert,T. and Hahn,S. (1992) A yeast TFIIB-related factor involved in RNA polymerase III transcription. Genes Dev., 6, 1940-1949.
6. Goodrich,J.A. and Tjian,R. (1994) TBP-TAF complexes: selectivity factors for eukaryotic transcription. Curr. Opin. Cell Biol., 6, 403-409.
7. Goomer,R.S., Urso,O. and Kunkel,G.R. (1994) A complex that contains proteins binding to the PSE and TATA sites in a human U6 small nuclear RNA promoter. Gene, 148, 269-275.
8. Harlow,E. and Lane,D. (1988) Antibodies: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
9. Henry,R.W., Sadowski,C.L., Kobayashi,R. and Hernandez,N. (1995) A TBP-TAF complex required for transcription of human snRNA genes by RNA polymerases II and III. Nature, 374, 653-657.
10. Hernandez,N. (1992) Transcription of vertebrate snRNA genes and related genes. In McKnight,S.L. and Yamamoto,K.R. (eds), Transcription Regulation. Cold Spring Harbor Monograph Series. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 281-313.
11. Hernandez,N. (1993) TBP, a universal eucaryotic transcription factor? Genes Dev., 7, 1291-1308.
12. Huet,J., Conesa,C., Manaud,N., Chaussivert,N. and Sentenac,A. (1994) Interactions between yeast TFIIIB components. Nucleic Adds Res., 22, 3433-3439.
13. Joazeiro,C.A., Kassavetis,G.A. and Geiduschek,E.P. (1994) Identical components of yeast transcription factor IIIB are required for transcription of TATA box-containing and TATA-less genes. Mol. Cell. Biol., 14, 2798-2808.
14. Joazeiro,C.A.P., Kassavetis,G.A. and Geiduschek,E.P. (1996) Alternative outcomes in assembly of promoter complexes: the roles of TBP and a flexible linker in placing TFIIIB on tRNA genes. Genes Dev., 10, 725-739.
15. Kassavetis,G.A., Bartholomew,B., Blanco,J.A., Johnson,T.E. and Geiduschek,P.E. (1991) Two essential components of the Saccharomyces cerevisiae transcription factor TFIIIB: transcription and DNA-binding properties. Proc. Natl Acad. Sci. USA, 88, 7308-7312.
16. Kassavetis,G.A., Bardeleben,C., Batholomew,B., Braun,B.R., Joazeiro,C.A.P., Pisano,M. and Geiduschek,E.P. (1994) Transcription by RNA polymerase III. In Conaway,R.C. and Conaway,J.W. (eds), Transcription, Mechanisms and Regulation. Raven Press, Ltd, New York, pp. 107-126.
17. Kassavetis,G.A., Nguyen,S.T., Kobayashi,R., Kumar,A., Geiduschek,E.P. and Pisano,M. (1995) Cloning, expression, and function of TFC5, the gene encoding the B″ component of the Saccharomyces cerevisiae RNA polymerase III transcription factor TFIIIB. Proc. Natl Acad. Sci. USA, 92, 9786-9790.
18. Kaufman,J. and Smale,S.T. (1994) Direct recognition of initiator elements by a component of the transcription factor IID complex. Genes Dev., 8, 821-829.
19. Lobo,S. and Hernandez,N. (1989) A 7 bp mutation converts a human RNA polymerase II snRNA promoter into an RNA polymerase III promoter. Cell, 58, 55-67.
20. Lobo,S.M. and Hernandez,N. (1994) Transcription of snRNA genes by RNA polymerases II and III. In Conaway,R.C. and Conaway,J.W. (eds), Transcription, Mechanisms and Regulation. Raven Press, Ltd, New York, pp. 127-159.
21. Lobo,S.M., Lister,J.M. Sullivan,M.L. and Hernandez,N. (1991) The cloned RNA polymerase II transcription factor IID selects RNA polymerase III to transcribe the human U6 gene in vitro. Genes Dev., 5, 1477-1489.
22. Lobo,S.M., Tanaka,M., Sullivan,M.L. and Hernandez,N. (1992) A TBP complex essential for transcription from TATA-less but not TATA-containing RNA polymerase III promoters is part of the TFIIIB fraction. Cell, 71, 1029-1040.
23. Lopez-De-Leon,A., Librizzi,M., Puglia,K. and Willis,I.M. (1992) PCF4 encodes an RNA polymerase III transcription factor with homology to TFIIB. Cell, 71, 211-220.
24. Mattaj,I.W., Dathan,N.A., Parry,H.W., Carbon,P. and Krol,A. (1988) Changing the RNA polymerase specificity of U snRNA gene promoters. Cell, 55, 435-442.
25. McKay,R.D.G. (1981) An immuno assay for the interaction between an SV40 T antigen related protein and DNA. Mol. Biol., 145, 471-482.
26. Mital,R., Kobayashi,R. and Hernandez,N. (1996) RNA polymerase III transcription from the human U6 and Ad2 VAI promoters has different requirements for hBRF, a subunit of human TFIIIB. Mol. Cell. Biol., in press.
27. Murphy,S., Yoon,J.-B., Gerster,T. and Roeder,R.G. (1992) Oct-1 and Oct-2 potentiate functional interactions of a transcription factor with the proximal sequence element of small nuclear RNA genes. Mol. Cell. Biol., 12, 3247-3261.
28. Purnell,B.A., Emanuel,P.A. and Gilmour,D.S. (1994) TFIID sequence recognition of the initiator and sequences farther downstream in Drosophila class II genes. Genes Dev., 8, 830-842.
29. Roberts,S., Miller,S.J., Lane,W.S., Lee,S. and Hahn,S. (1996) Cloning and functional characterization of the gene encoding the TFIIIB90 subunit of RNA polymerase III transcription factor TFIIIB. J. Biol. Chem., 271, 14903-14909.
30. Ruth,J., Conesa,C., Dieci,G., Lefebvre,O., Dusterhoft,A., Ottonello,S. and Sentenac,A. (1996) A suppressor of mutations in the class III transcription system encodes a component of yeast TFIIIB. EMBO J., 15, 1941-1949.
31. Sadowski,C.L., Henry,R.W., Lobo,S.M. and Hernandez,N. (1993) Targeting TBP to a non-TATA box cis-regulatory element: a TBP-containing complex activates transcription from snRNA promoters through the PSE. Genes Dev., 7, 1535-1548.
32. Sadowski,C.L., Henry,R.W., Kobayashi,R. and Hernandez,N. (1996) The SNAP45 subunit of the small nuclear RNA (snRNA) activating protein complex is required for RNA polymerase II and III snRNA gene transcription and interacts with the TATA box binding protein. Proc. Natl Acad. Sci. USA, 93, 4289-4293.
33. Simmen,K.A., Bernues,J., Parry,H.D., Stunnenberg,H.G., Berkenstam,A., Cavallini,B., Egly,J.-M. and Mattaj,I.W. (1991) TFIID is required for in vitro transcription of the human U6 gene by RNA polymerase III. EMBO J., 10, 1853-1862.
34. Skowronski,J., Fanning,T.G. and Singer,M.F. (1988) Unit length LINE-1 transcripts in human teratocarcinoma cells. Mol. Cell. Biol., 8, 1385-1397.
35. Smale,S.T. (1994) Core promoter architecture for eucaryotic protein-encoding genes. In Conaway,R.C. and Conaway,J.W. (eds), Transcription, Mechanisms and Regulation. Raven Press Ltd, New York, pp. 63-81.
36. Struhl,K. (1994) Duality of TBP, the universal transcription factor. Science, 263, 1103-1104.
37. II150: similarity to yeast gene TSM-1 and specific binding to core promoter DNA. Science, 264, 933-941.
38. Verrijzer,C.P., Chen,J.L., Yokomori,K. and Tjian,R. (1995) Binding of TAFs to core elements directs promoter selectivity by RNA polymerase II. Cell, 891, 1115-1125.
39. Waldschmidt,R., Wanandi,I. and Seifart,K.H. (1991) Identification of transcription factors required for the expression of mammalian U6 genes in vitro. EMBO J., 10, 2595-2603.
40. Wang,Z. and Roeder,R.G. (1995) Structure and function of a human transcription factor TFIIIB subunit that is evolutionarily conserved and contains both TFIIB- and high-mobility-group protein 2-related domains. Proc. Natl Acad. Sci. USA, 92, 7026-7030.
41. Weis,L. and Reinberg,D. (1992) Transcription by RNA polymerase II: initiator-directed formation of transcription-competent complexes. FASEB J., 6, 3300-3309.
42. Whitehall,S., Kassavetis,G.A. and Geiduschek,E.P. (1995) The symmetry of the yeast U6 RNA gene's TATA box, and the orientation of the TATA-binding protein in yeast TFIIIB. Genes Dev., 9, 2974-2985.
43. Yoon,J.-B. and Roeder,R.G. (1996) Cloning of two proximal sequence element-binding transcription factor subunits (γ and δ) that are required for transcription of small nuclear RNA genes by RNA polymerases II and III and interact with the TATA-binding protein. Mol. Cell. Biol., 16, 1-9.
44. Yoon,J.-B., Murphy,S., Bai,L., Wang,Z. and Roeder,R.G. (1995) Proximal sequence element-binding transcription factor (PTF) is a multisubunit complex required for transcription of both RNA polymerase II- and RNA polymerase III-dependent small nuclear RNA genes. Mol. Cell. Biol., 15, 2019-2027.
45. Zawel,L. and Reinberg,D. (1995) Common themes in assembly and function of eukaryotic transcription complexes. Annu. Rev. Biochem., 64, 533-561.