A procedure for the prediction of temperature-sensitive mutants of a globular protein based solely on the amino acid sequence

Proceedings of the National Academy of Sciences of the United States of America

Volumn 93, Issue 24, 1996, Pages 13908-13913

  Varadarajan, R ^b   Nagarajaram, H A ^a,b   Ramakrishnan, C ^b  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME B; LYSOZYME; MUTANT PROTEIN; NUCLEASE; REPRESSOR PROTEIN;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; CONFERENCE PAPER; CRYSTAL STRUCTURE; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; PROTEIN STABILITY; TEMPERATURE SENSITIVE MUTANT;

EID: 0030462461     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.93.24.13908     Document Type: Article

References (43)

1. Horowitz, H. N. (1950) Adv. Genet. 3, 33-71.
2. Fried, M. (1965) Proc. Natl. Acad. Sci. USA 53, 486-491.
3. Couso, J. P., Bate, M. & Martinez-Arias, A. (1993) Science 259, 484-489.
4. Suzuki, D. T., Grigliatti, T. & Williamson, R. (1971) Proc. Natl. Acad. Sci. USA 68, 890-893.
5. Nelson, H. C. M. & Sauer, R. T. (1985) Cell 42, 549-558.
6. Spradling, A. C. & Rubin, G. M.. (1983) Cell 34, 47-57.
7. Loukeris, T. G., Livadaras, I., Arcà, B., Zabalou, S. & Savakis, C. (1995) Science 270, 2002-2005.
8. Hodgkin, J., Plasterk, R. H. A. & Waterston, R. H. (1995) Science 270, 410-414.
9. Schell, J. & Van Montagu, M. (1983) Bio/Technology 1, 175-180.
10. Nash, H. (1981) Annu. Rev. Genet. 15, 143-167.
11. Scherer, S. & Davies, R. W. (1979) Proc. Natl. Acad. Sci. USA 76, 4951-4955.
12. Ramirez-Solis, R., Zheng, H., Whiting, J., Krumlauf, R. & Bradley, A. (1993) Cell 73, 279-294.
13. Sarkar, G. & Sommer, S. S. (1990) BioTechniques 8, 404-407.
14. Simon, M. A., Bowtell, D. D. L., Dodson, G. S., Laverty, T. S. & Rubin, G. M. (1991) Cell 67, 701-716.
15. Jürgen Dohmen, R., Wu, P. & Varshavsky, A. (1994) Science 263, 1273-1276.
16. Pakula, A. A., Young, V. B. & Sauer, R. T. (1986) Proc. Natl. Acad. Sci. USA 83, 8829-8833.
17. Kellis, J. T., Nyberg, K. & Fersht, A. R. (1989) Biochemistry 28, 4914-4922.
18. Shortle, D., Stites, W. A. & Meeker, A. K. (1990) Biochemistry 29, 8033-8041.
19. Alber, T., Dao-pin, S., Nye, J. A., Muchmore, D. C. & Matthews, B. W. (1987) Biochemistry 26, 3754-3758.
20. Sandberg, W. S., Schlunk, P., Zabin, H. B. & Terwilliger, T. C. (1995) Biochemistry 34, 11970-11978.
21. Parsell, D. A. & Sauer, R. T. (1989) J. Biol. Chem. 264, 7590-7595.
22. Pakula, A. A. & Sauer, R. T. (1989) Annu. Rev. Genet. 23, 289-310.
23. Rose, G. D. & Roy, S. (1980) Proc. Natl. Acad. Sci. USA 77, 4643-4647.
24. Hopp, T. P. & Woods, K. R. (1981) Proc. Natl. Acad. Sci. USA 78, 3824-3828.
25. Eisenberg, D. (1984) Annu. Rev. Biochem. 53, 595-623.
26. Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F., Jr., Brice, M. D., Rodgers, J. R., Kennard, O., Shimanouchi, T. & Tasumi, M. (1977) J. Mol. Biol. 112, 535-542.
27. Matthews, B. W. (1995) Adv. Protein Chem. 46, 249-277.
28. Hecht, M. H., Nelson, H. C. M. & Sauer, R. T. (1983) Proc. Natl. Acad. Sci. USA 80, 2676-2680.
29. Lim, W. A. & Sauer, R. T. (1989) Nature (London) 339, 31-36.
30. Holbrook, S. R., Muskal, S. M. & Kim, S.-H. (1990) Protein Eng. 3, 659-665.
31. Rost, B. & Sanders, C. (1995) Proteins 23, 295-300.
32. Wako, H. & Blundell, T. M. (1994) J. Mol. Biol. 238, 682-692.
33. Lee, B. & Richards, F. M. (1971) J. Mol. Biol. 55, 379-400.
34. Cornette, J. L., Cease, K. B., Margalit, H., Spouge, J. L., Berzofsky, J. A. & DeLisi, C. (1987) J. Mol. Biol. 195, 659-685.
35. Rose, G. D., Geselowitz, A. R., Lesser, G. L., Lee, R. H. & Zehfus, M. H. (1985) Science 229, 834-838.
36. Eisenberg, D., Wesson, M. & Wilcox, W. (1985) in Prediction of Protein Structure and the Principles of Protein Conformation, ed. Fasman, G. D. (Plenum, New York), pp. 635-647.
37. Varadarajan, R., Connelly, P. R., Sturtevant, J. M. & Richards, F. M. (1992) Biochemistry 31, 12315-12327.
38. Lim, W. A., Farruggio, D. C. & Sauer, R. T. (1992) Biochemistry 31, 4324-4333.
39. Sandberg, W. S. & Terwilliger, T. C. (1989) Science 245, 54-57.
40. Varadarajan, R., Lambright, D. G. & Boxer, S. G. (1989) Biochemistry 28, 3771-3781.
41. Dao-pin, S., Anderson, D. E., Baase, W. A., Dahlquist, F. W. & Matthews, B. W. (1991) Biochemistry 30, 11521-11529.
42. Stites, W. E., Gittis. A. G., Lattman, E. E. & Shortle, D. (1991) J. Mol. Biol. 221, 7-14.
43. Swindells, M. B. (1995) Protein Sci. 4, 93-102.