Peptides modeled on the transmembrane region of the slow voltage-gated IsK potassium channel: Structural characterization of peptide assemblies in the β-strand conformation

Biochemistry

Volumn 35, Issue 50, 1996, Pages 16213-16221

  Aggeli, Amalia ^a   Boden, Neville ^a   Cheng, Ya Ling ^a   Findlay, John B C ^a   Knowles, Peter F ^a   Kovatchev, Peter ^a   Turnbull, Paul J H ^a   Horváth, Lászlo ^b   Marsh, Derek ^b  

^a UNIVERSITY OF LEEDS   (United Kingdom)

^b MAX PLANCK INSTITUTE FOR BIOPHYSICAL CHEMISTRY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

2 CHLOROETHANOL; DIMYRISTOYLPHOSPHATIDYLCHOLINE; DIPALMITOYLPHOSPHATIDYLCHOLINE; MEMBRANE PROTEIN; PEPTIDE; POTASSIUM CHANNEL;

AMINO ACID SEQUENCE; ARTICLE; BETA CHAIN; CONTROLLED STUDY; DEUTERON NUCLEAR MAGNETIC RESONANCE; DIFFERENTIAL SCANNING CALORIMETRY; ELECTRON SPIN RESONANCE; INFRARED SPECTROSCOPY; PHOSPHORUS NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN SECONDARY STRUCTURE; X RAY DIFFRACTION;

1,2-DIPALMITOYLPHOSPHATIDYLCHOLINE; AMINO ACID SEQUENCE; ANIMALS; DIMYRISTOYLPHOSPHATIDYLCHOLINE; ELECTRON SPIN RESONANCE SPECTROSCOPY; LIPID BILAYERS; MOLECULAR SEQUENCE DATA; PEPTIDE BIOSYNTHESIS; PEPTIDE FRAGMENTS; PEPTIDES; POTASSIUM CHANNELS; POTASSIUM CHANNELS, VOLTAGE-GATED; PROTEIN STRUCTURE, SECONDARY; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; THERMODYNAMICS; X-RAY DIFFRACTION;

EID: 0030461703     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi960891g     Document Type: Article

References (58)

1. Ahn, D. J., & Frances, E. I. (1992) J. Phys. Chem. 96, 9952-9959.
2. Barrow, C. J., & Zagorski, M. G. (1991) Science 253, 179-182.
3. Bartlett, G. R. (1959) J. Biol. Chem. 234, 466-468.
4. Bienvenue, A., Bloom, M., Davis, J. H., & Devaux, P. F. (1982) J. Biol. Chem. 257, 3032-3038.
5. Bloom, M., & Smith, I. C. P. (1985) in Progress in Protein-Lipid Interactions (Watts, A., & De Pont, J. J. H. H. M., Eds.) Vol. 1, pp 61-88, Elsevier, Amsterdam.
6. Boden, N., Jones, S. A., & Sixl, F. (1991) Biochemistry 30, 2146-2155.
7. Bogusz, S., Boxer, A., & Busath, D. D. (1992) Protein Eng. 5, 285-293.
8. Branden, C., & Tooze, J. (1991) in Introduction to Protein Structure, Garland Publishing Inc., New York & London.
9. Brophy, P. J., Horváth, L. I., & Marsh, D. (1984) Biochemistry 23, 860-865.
10. Byler, D. M., & Susi, H. (1986) Biopolymers 25, 469-487.
11. Chapman, D. (1983) in Membrane Fluidity in Biology (Aloia, R. C., Ed.) Vol. 2, pp 5-42, Academic Press, New York.
12. Chapman, D., Cornell, B. A., Eliasz, A. W., & Perry, A. (1977) J. Mol. Biol. 113, 517-538.
13. Cross, T. A., & Opella, C. J. (1994) Curr. Opin. Struct. Biol. 4, 574-581.
14. Davis, J. H. (1983) Biochim. Biophys. Acta 737, 117-171.
15. Eibl, H., & Lands, W. E. M. (1969) Anal. Biochem. 30, 51-57.
16. Fischbarg, J., Cheung, M., Czeglady, F., Li, J., Iserovich, P., Kuang, K., Hubbard, J., Garner, M., Rosen, D. M., Golde, D. W., & Vena, J. C. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 11658-11662.
17. Fraser, R. D. B., & MacRae, T. P. (1973) in Conformations in Fibrous Proteins and Related Synthetic Polypeptides, p 628, Academic Press, New York.
18. Frey, S., & Tamm, L. K. (1991) Biophys. J. 60, 922-930.
19. Fringeli, U. P. (1977) Z. Naturforsch., C: Biosci. 32C, 20-45.
20. Fringeli, U. P., & Günthard, H. H. (1981) in Membrane Spectroscopy (Grelll, E., Ed.) pp 290-332, Springer-Verlag, Berlin, Heidelberg, and New York.
21. Gremlich, H. U., Fringeli, U. P., & Schwyzer, R. (1983) Biochemistry 22, 4257-4264.
22. Gupta, C. M., Radhakrishnan, R., & Khorana, H. G. (1977) Proc. Natl. Acad. Sci. USA. 74, 4315-4319.
23. Guttman, C. M., & Flynn, J. H. (1973) Anal. Chem. 45, 408-410.
24. Hirs, C. H. W. (1967) Methods Enzymol. 11, 325-329.
25. Janiak, M. J., Small, D. M., & Shipley, G. G. (1976) Biochemistry 15, 4575-4580.
26. Janiak, M. J., Small, D. M., & Shipley, G. G. (1979) J. Biol. Chem. 13, 6068-6078.
27. King, D. S., Fields, C. G., & Fields, G. B. (1990) Int. J. Pept. Protein Res. 36, 255-266.
28. Krimm, S., & Bandekar, J. (1986) Adv. Protein Chem. 38, 181-364.
29. Lowry, O. H., Rosenbrough, N. J., Farr, A. C., & Randall, R. J. (1951) J. Biol. Chem. 193, 265-275.
30. Luzzati, V. (1968) in Biological Membranes (Chapman, D., Ed.) Vol. 1, pp 71-123, Academic Press, New York.
31. Marsh, D. (1981) in Membrane Spectroscopy (Grell, E., Ed.) pp 51-142, Springer-Verlag, Berlin, Heidelberg, and New York.
32. Marsh, D. (1982) Tech. Life Sci.: Biochem. B4/II, B426/1-B426/ 44.
33. Marsh, D. (1985) in Progress in Protein-Lipid Interactions (Watts, A., & De Pont, J. J. H. H. M., Eds.) Vol. I, pp 143-172, Elsevier, Amsterdam.
34. Marsh, D. (1993) in New Comprehensive Biochemistry: Protein-Lipid Interactions (Watts, A., Ed.) Vol. 25, pp 41-66, Elsevier, Amsterdam.
35. Marsh, D., & Watts, A. (1982) in Lipid-Protein Interactions (Jost, P. C., & Griffith, O. H., Eds.) Vol. 2, pp 53-126, Wiley-Interscience, New York.
36. Mason, J. T., Broccoli, A. V., & Huang, C.-H. (1981) J. Biochem. 113, 96-101.
37. Miyazawa, T. (1960) J. Am. Chem. Soc. 32, 1647-1652.
38. Miyazawa, T. (1967) in Poly-α-Amino Acids. Protein Models for Conformational Studies (Fasman, G. D., Ed.) pp 69-103, Marcel Dekker, New York.
39. Miyazawa, T., & Blout, E. R. (1961) J. Am. Chem. Soc. 83, 712-719.
40. Nagle, J. F., & Wilkinson, D. A. (1978) Biophys. J. 23, 159-175.
41. Ohta, K., & Iwamoto. R. (1985) Appl. Spectrosc. 39, 418-425.
42. Oldfield, E. (1988) Biochem. Soc. Trans. 16, 1-10.
43. Pan, K. M., Baldwin, M., Nguyen, J., Gasset, M., Serban, A., Groth, D., Mehlhorn, I., Huang, Z., Fletterick, R. J., Cohen, F. Z., & Prusiner, S. B. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 10962-10966.
44. Peelen, S. J. C. J., Sanders, J. C., Hemminga, M. A., & Marsh, D. (1992) Biochemistry 31, 2670-2677.
45. Prusiner, S. B. (1991) Science 252, 1515-1522.
46. Rice, D., & Oldfield, E. (1979) Biochemistry 18, 3272-3279.
47. Sandbank, B. M. (1986) Ph.D. Thesis, Department of Biophysics, University of Leeds.
48. Seelig, J. (1978) Biochim. Biophys. Acta 515, 105-140.
49. Seelig, J., & Seelig, A. (1980) Q. Rev. Biophys. 13, 19-61.
50. Smith, P. K., Krohn, R. I., Henmanson, G. T., Mallia, A. K., Gartner, F. H., Provenzano, M. D., Fujimoto, E. K., Goeke, N. M., Olson, B. J., & Klenk, D. C. (1985) Anal. Biochem. 150, 76-85.
51. Surewicz, W. K., & Manisch, H. H. (1988) Biochim. Biophys. 952, 115-130.
52. Surewicz, W. K., Mantsch, H. H., & Chapman, D. (1993) Biochemistry 32, 389-394.
53. Takumi, T., Ohkubo, H., & Nakanishi, S. (1988) Science 242, 1042-1045.
54. Unwin, N. (1993) J. Mol. Biol. 229, 1101-1124.
55. Watnick, P. I., & Chan, S. I. (1990) Biochemistry 29, 6215-6221.
56. Weiss, M. S., Kreusch, A., Schiltz, E., Nestel, U., Weite, W., Weckesser, J., & Schulz, G. E. (1991) FEBS Lett. 280, 379-382.
57. Yellen, G., Jurman, M., Abramson, T., & Mackinnon, R. (1991) Science 251, 939-942.
58. Zbinden, R. (1964) in Infrared Spectroscopy of High Polymers, Academic Press, New York.