-
1
-
-
0028114231
-
Structure at 2.8 Å resolution of F1-ATPase from bovine heart mitochondria
-
Abrahams JP, Leslie AGW, Lutter R, Walker JE (1994) Structure at 2.8 Å resolution of F1-ATPase from bovine heart mitochondria. Nature 370: 621-628
-
(1994)
Nature
, vol.370
, pp. 621-628
-
-
Abrahams, J.P.1
Leslie, A.G.W.2
Lutter, R.3
Walker, J.E.4
-
2
-
-
0029557910
-
Computational searching and mutagenesis suggest a structure for the pentameric transmembrane domain of phospholamban
-
Adams PD, Arkin IT, Engelman DM, Brünger AT (1995) Computational searching and mutagenesis suggest a structure for the pentameric transmembrane domain of phospholamban. Nature Struct Biol 2: 154-159
-
(1995)
Nature Struct Biol
, vol.2
, pp. 154-159
-
-
Adams, P.D.1
Arkin, I.T.2
Engelman, D.M.3
Brünger, A.T.4
-
3
-
-
85022457076
-
Tetraphilin: A four-helix proton channel built on a tetra-phenylporphyrin framework
-
Åkerfeldt KS, Kim RM, Camac D, Groves JT, Lear JD, DeGrado WF (1992) Tetraphilin: a four-helix proton channel built on a tetra-phenylporphyrin framework. J Am Chem Soc 114: 9656-9657
-
(1992)
J Am Chem Soc
, vol.114
, pp. 9656-9657
-
-
Åkerfeldt, K.S.1
Kim, R.M.2
Camac, D.3
Groves, J.T.4
Lear, J.D.5
DeGrado, W.F.6
-
4
-
-
0001513363
-
Synthetic peptides as models for ion channel proteins
-
Åkerfeldt KS, Lear JD, Wasserman ZR, Chung LA, DeGrado WF (1993) Synthetic peptides as models for ion channel proteins. Acc Chem Res 26: 191-197
-
(1993)
Acc Chem Res
, vol.26
, pp. 191-197
-
-
Åkerfeldt, K.S.1
Lear, J.D.2
Wasserman, Z.R.3
Chung, L.A.4
DeGrado, W.F.5
-
5
-
-
0029051933
-
Structural model of the phospholamban ion channel complex in phospholipid membranes
-
Arkin IT, Rothman M, Ludlam CFC, Aimoto S, Engelman DM, Rothschild KJ, Smith SO (1995) Structural model of the phospholamban ion channel complex in phospholipid membranes. J Mol Biol 248: 824-834
-
(1995)
J Mol Biol
, vol.248
, pp. 824-834
-
-
Arkin, I.T.1
Rothman, M.2
Ludlam, C.F.C.3
Aimoto, S.4
Engelman, D.M.5
Rothschild, K.J.6
Smith, S.O.7
-
6
-
-
0029863372
-
Molecular dynamics simulations of water within models of transbilayer pores
-
Breed J, Sankararamakrishnan R, Kerr ID, Sansom MSP (1996) Molecular dynamics simulations of water within models of transbilayer pores. Biophys J 70: 1643-1661
-
(1996)
Biophys J
, vol.70
, pp. 1643-1661
-
-
Breed, J.1
Sankararamakrishnan, R.2
Kerr, I.D.3
Sansom, M.S.P.4
-
7
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimisation, and dynamics calculations
-
Brooks BR, Bruccoleri RE, Olafson BD, States DJ, Swaminathan S, Karplus M (1983) CHARMM: A program for macromolecular energy, minimisation, and dynamics calculations. J Comp Chem 4: 187-217
-
(1983)
J Comp Chem
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
9
-
-
0025895720
-
Time-correlation analysis of simulated water motion in flexible and rigid gramicidin channels
-
Chiu SW, Jakobsson E, Subramanian S, McCammon JA (1991) Time-correlation analysis of simulated water motion in flexible and rigid gramicidin channels. Biophys J 60: 273-285
-
(1991)
Biophys J
, vol.60
, pp. 273-285
-
-
Chiu, S.W.1
Jakobsson, E.2
Subramanian, S.3
McCammon, J.A.4
-
11
-
-
0026721333
-
Fluorescence studies of the secondary structure and orientation of a model ion channel peptide in phospholipid vesicles
-
Chung LA, Lear J, DeGrado WF (1992) Fluorescence studies of the secondary structure and orientation of a model ion channel peptide in phospholipid vesicles. Biochemistry 31: 6608-6616
-
(1992)
Biochemistry
, vol.31
, pp. 6608-6616
-
-
Chung, L.A.1
Lear, J.2
DeGrado, W.F.3
-
12
-
-
0026779245
-
Crystal structures explain functional properties of two E. coli porins
-
Cowan SW, Schirmer T, Rummel G, Steiert M, Ghosh R, Pauptit RA, Jansonius JN, Rosenbusch JP (1992) Crystal structures explain functional properties of two E. coli porins. Nature 358: 727-733
-
(1992)
Nature
, vol.358
, pp. 727-733
-
-
Cowan, S.W.1
Schirmer, T.2
Rummel, G.3
Steiert, M.4
Ghosh, R.5
Pauptit, R.A.6
Jansonius, J.N.7
Rosenbusch, J.P.8
-
13
-
-
0025013784
-
Diffusion and kinetic approaches to describe permeation in ionic channels
-
Dani JA, Levitt DG (1990) Diffusion and kinetic approaches to describe permeation in ionic channels. J Theor Biol 146: 289-301
-
(1990)
J Theor Biol
, vol.146
, pp. 289-301
-
-
Dani, J.A.1
Levitt, D.G.2
-
14
-
-
0025008819
-
Conformationally constrained α-helical peptide models for protein ion channels
-
DeGrado WF, Lear JD (1990) Conformationally constrained α-helical peptide models for protein ion channels. Biopolymers 29: 205-213
-
(1990)
Biopolymers
, vol.29
, pp. 205-213
-
-
Degrado, W.F.1
Lear, J.D.2
-
15
-
-
0030050164
-
A semi-microscopic Monte Carlo study of permeation energetics in a gramicidin-like channel: The origin of cation selectivity
-
Dorman V, Partenskii MB, Jordan PC (1996) A semi-microscopic Monte Carlo study of permeation energetics in a gramicidin-like channel: the origin of cation selectivity. Biophys J 70: 121-134
-
(1996)
Biophys J
, vol.70
, pp. 121-134
-
-
Dorman, V.1
Partenskii, M.B.2
Jordan, P.C.3
-
17
-
-
0028170113
-
The aquaporin family of membrane water channels
-
Engel A, Walz T, Agre P (1994) The aquaporin family of membrane water channels. Curr Opin Struct Biol 4: 545-553
-
(1994)
Curr Opin Struct Biol
, vol.4
, pp. 545-553
-
-
Engel, A.1
Walz, T.2
Agre, P.3
-
18
-
-
0000750272
-
Structure and dynamics of self-assembling peptide nanotubes and the channel-mediated water organization and self-diffusion. A molecular dynamics study
-
Engels M, Bashford G, Ghadiri MR (1995) Structure and dynamics of self-assembling peptide nanotubes and the channel-mediated water organization and self-diffusion. A molecular dynamics study. J Amer Chem Soc 117: 9151-9158
-
(1995)
J Amer Chem Soc
, vol.117
, pp. 9151-9158
-
-
Engels, M.1
Bashford, G.2
Ghadiri, M.R.3
-
19
-
-
0028073137
-
Detection of a water molecule in the active-site of bacteriorhodopsin-hydrogen-bonding changes during the primary photoreaction
-
Fischer WB, Sonar S, Marti T, Khorana HG, Rothschild KJ (1994) Detection of a water molecule in the active-site of bacteriorhodopsin-hydrogen-bonding changes during the primary photoreaction. Biochem 33: 12757-12762
-
(1994)
Biochem
, vol.33
, pp. 12757-12762
-
-
Fischer, W.B.1
Sonar, S.2
Marti, T.3
Khorana, H.G.4
Rothschild, K.J.5
-
20
-
-
0021755525
-
Intrahelical hydrogen bonding of serine, threonine and cysteine residues within α-helices and its relevance to membrane-bound proteins
-
Gray TM, Matthews BM (1984) Intrahelical hydrogen bonding of serine, threonine and cysteine residues within α-helices and its relevance to membrane-bound proteins. J Mol Biol 175: 75-81
-
(1984)
J Mol Biol
, vol.175
, pp. 75-81
-
-
Gray, T.M.1
Matthews, B.M.2
-
22
-
-
0028890031
-
Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans
-
Iwata S, Ostermeier C, Ludwig B, Michel H (1995) Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans. Nature 376: 660-669
-
(1995)
Nature
, vol.376
, pp. 660-669
-
-
Iwata, S.1
Ostermeier, C.2
Ludwig, B.3
Michel, H.4
-
23
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen WL, Chandresekhar J, Madura JD, Impey RW, Klein ML (1983) Comparison of simple potential functions for simulating liquid water. J Chem Phys 79: 926-935
-
(1983)
J Chem Phys
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandresekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
24
-
-
0028973394
-
Water-mediated proton transfer in proteins - An FTIR study of bacteriorhodopsin
-
Kandori H, Yamazaki Y, Sasaki J, Needleman R, Lanyi JK, Maeda A (1995) Water-mediated proton transfer in proteins - an FTIR study of bacteriorhodopsin. J Am Chem Soc 117: 2118-2119
-
(1995)
J Am Chem Soc
, vol.117
, pp. 2118-2119
-
-
Kandori, H.1
Yamazaki, Y.2
Sasaki, J.3
Needleman, R.4
Lanyi, J.K.5
Maeda, A.6
-
25
-
-
0028000828
-
Electrostatic properties of two porin channels from Escherichia coli
-
Karshikoff A, Spassov V, Cowan SW, Ladenstein R, Schirmer T (1994) Electrostatic properties of two porin channels from Escherichia coli. J Mol Biol 240: 372-384
-
(1994)
J Mol Biol
, vol.240
, pp. 372-384
-
-
Karshikoff, A.1
Spassov, V.2
Cowan, S.W.3
Ladenstein, R.4
Schirmer, T.5
-
26
-
-
0029920368
-
Molecular modelling of Staphylococcal 5-toxin ion channels by restrained molecular dynamics
-
Kerr ID, Doak DG, Sankararamakrishnan R, Breed J, Sansom MSP (1996) Molecular modelling of Staphylococcal 5-toxin ion channels by restrained molecular dynamics. Prot Engng 9: 161-171
-
(1996)
Prot Engng
, vol.9
, pp. 161-171
-
-
Kerr, I.D.1
Doak, D.G.2
Sankararamakrishnan, R.3
Breed, J.4
Sansom, M.S.P.5
-
27
-
-
0029003793
-
Ion channel formation by synthetic analogues of Staphylococcal 5-toxin
-
Kerr ID, Dufourcq J, Rice JA, Fredkin DR, Sanson MSP (1995) Ion channel formation by synthetic analogues of Staphylococcal 5-toxin. Biochim Biophys Acta 1236: 219-227
-
(1995)
Biochim Biophys Acta
, vol.1236
, pp. 219-227
-
-
Kerr, I.D.1
Dufourcq, J.2
Rice, J.A.3
Fredkin, D.R.4
Sanson, M.S.P.5
-
28
-
-
0028070549
-
Parallel helix bundles and ion channels: Molecular modelling via simulated annealing and restrained molecular dynamics
-
Kerr ID, Sankararamakrishnan R, Smart OS, Sansom MSP (1994) Parallel helix bundles and ion channels: molecular modelling via simulated annealing and restrained molecular dynamics. Biophys J 67: 1501-1515
-
(1994)
Biophys J
, vol.67
, pp. 1501-1515
-
-
Kerr, I.D.1
Sankararamakrishnan, R.2
Smart, O.S.3
Sansom, M.S.P.4
-
29
-
-
0028278173
-
A helical-dipole model describes the single-channel current rectification of an uncharged peptide ion channel
-
Kienker PK, DeGrado WF, Lear JD (1994) A helical-dipole model describes the single-channel current rectification of an uncharged peptide ion channel. Proc Nat Acad Sci USA 91: 4859-4863
-
(1994)
Proc Nat Acad Sci USA
, vol.91
, pp. 4859-4863
-
-
Kienker, P.K.1
DeGrado, W.F.2
Lear, J.D.3
-
30
-
-
0001156338
-
Heterogeneous diffusion of water at protein surfaces: Application to BPTI
-
Knapp EW, Muegge I (1993) Heterogeneous diffusion of water at protein surfaces: application to BPTI. J Phys Chem 97: 11 339-11 343
-
(1993)
J Phys Chem
, vol.97
, pp. 11339-11343
-
-
Knapp, E.W.1
Muegge, I.2
-
32
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis PJ (1991) MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J Appl Cryst 24: 946-950
-
(1991)
J Appl Cryst
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
33
-
-
0028153088
-
Refined structure of the porin from Rhodobacter blastica
-
Kreusch A, Schulz GE (1994) Refined structure of the porin from Rhodobacter blastica. J Mol Biol 243: 891-905
-
(1994)
J Mol Biol
, vol.243
, pp. 891-905
-
-
Kreusch, A.1
Schulz, G.E.2
-
34
-
-
0028128234
-
Temperature dependence of conductivity in electrolyte solutions and ionic channels of biological membranes
-
Kuyucak S, Chung SH (1994) Temperature dependence of conductivity in electrolyte solutions and ionic channels of biological membranes. Biophys Chem 51: 15-24
-
(1994)
Biophys Chem
, vol.51
, pp. 15-24
-
-
Kuyucak, S.1
Chung, S.H.2
-
35
-
-
0023907575
-
Synthetic amphiphilic peptide models for protein ion channels
-
Lear JD, Wasserman ZR, DeGrado WF (1988) Synthetic amphiphilic peptide models for protein ion channels. Science 240: 1177-1181
-
(1988)
Science
, vol.240
, pp. 1177-1181
-
-
Lear, J.D.1
Wasserman, Z.R.2
DeGrado, W.F.3
-
37
-
-
0023688987
-
Properties of ion channels formed by Staphylococcus aureus δ-toxin
-
Mellor IR, Thomas DH, Sansom MSP (1988) Properties of ion channels formed by Staphylococcus aureus δ-toxin. Biochim Biophys Acta 942: 280-294
-
(1988)
Biochim Biophys Acta
, vol.942
, pp. 280-294
-
-
Mellor, I.R.1
Thomas, D.H.2
Sansom, M.S.P.3
-
38
-
-
0025007175
-
Synporins-synthetic proteins that emulate the pore structure of biological ionic channels
-
Montai M, Montai MS, Tomich JM (1990) Synporins-synthetic proteins that emulate the pore structure of biological ionic channels. Proc Natl Acad Sci USA 87: 6929-6933
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 6929-6933
-
-
Montai, M.1
Montai, M.S.2
Tomich, J.M.3
-
39
-
-
0029150299
-
Design of molecular function: Channels of communication
-
Montai M (1995) Design of molecular function: channels of communication. Ann Rev Biophys Biomol Struct 24: 31-57
-
(1995)
Ann Rev Biophys Biomol Struct
, vol.24
, pp. 31-57
-
-
Montai, M.1
-
40
-
-
0025135113
-
Bundles of amphipathic transmembrane α-helices as a structural motif for ion conducting channel proteins: Studies on sodium channels and acetylcholine receptors
-
Oiki S, Madison V, Montai M (1990) Bundles of amphipathic transmembrane α-helices as a structural motif for ion conducting channel proteins: studies on sodium channels and acetylcholine receptors. Proteins: Struct Func Genet 8: 226-236
-
(1990)
Proteins: Struct Func Genet
, vol.8
, pp. 226-236
-
-
Oiki, S.1
Madison, V.2
Montai, M.3
-
42
-
-
33845790250
-
Molecular dynamics study of liquid water
-
Rahman A, Stillinger FH (1971) Molecular dynamics study of liquid water. J Chem Phys 55: 3336-3359
-
(1971)
J Chem Phys
, vol.55
, pp. 3336-3359
-
-
Rahman, A.1
Stillinger, F.H.2
-
43
-
-
0018456521
-
Solvation. A molecular dynamics study of a dipeptide in water
-
Rossky PJ, Karplus M (1979) Solvation. A molecular dynamics study of a dipeptide in water. J Amer Chem Soc 101: 1913-1936
-
(1979)
J Amer Chem Soc
, vol.101
, pp. 1913-1936
-
-
Rossky, P.J.1
Karplus, M.2
-
44
-
-
0025882246
-
Ion transport in a model gramicidin channel: Structure and thermodynamics
-
Roux B, Karplus M (1991) Ion transport in a model gramicidin channel: structure and thermodynamics. Biophys J 59: 961-981
-
(1991)
Biophys J
, vol.59
, pp. 961-981
-
-
Roux, B.1
Karplus, M.2
-
45
-
-
0028321565
-
Molecular dynamics simulations of the gramicidin channel
-
Roux B, Karplus M (1994) Molecular dynamics simulations of the gramicidin channel. Ann Rev Biophys Biomol Struct 23: 731-761
-
(1994)
Ann Rev Biophys Biomol Struct
, vol.23
, pp. 731-761
-
-
Roux, B.1
Karplus, M.2
-
46
-
-
0029813087
-
The pore domain of the nicotinic acetylcholine receptor: Molecular modelling and electrostatics
-
in press
-
Sankararamakrishnan R, Adcock C, Sansom MSP (1996) The pore domain of the nicotinic acetylcholine receptor: molecular modelling and electrostatics. Biophys J 71 (4) (in press)
-
(1996)
Biophys J
, vol.71
, Issue.4
-
-
Sankararamakrishnan, R.1
Adcock, C.2
Sansom, M.S.P.3
-
47
-
-
0028824169
-
Modelling packing interactions in parallel helix bundles: Pentameric bundles of nicotinic receptor M2 helices
-
Sankararamakrishnan R, Sansom MSP (1995) Modelling packing interactions in parallel helix bundles: pentameric bundles of nicotinic receptor M2 helices. Biochim Biophys Acta 1239: 122-132
-
(1995)
Biochim Biophys Acta
, vol.1239
, pp. 122-132
-
-
Sankararamakrishnan, R.1
Sansom, M.S.P.2
-
48
-
-
0025935264
-
The biophysics of peptide models of ion channels
-
Sansom MSP (1991) The biophysics of peptide models of ion channels. Prog Biophys MoI Biol 55: 139-236
-
(1991)
Prog Biophys MoI Biol
, vol.55
, pp. 139-236
-
-
Sansom, M.S.P.1
-
49
-
-
0027293464
-
Alamethicin and related peptaibols- Model ion channels
-
Sansom MSP (1993a) Alamethicin and related peptaibols-model ion channels. Eur Biophys J 22: 105-124
-
(1993)
Eur Biophys J
, vol.22
, pp. 105-124
-
-
Sansom, M.S.P.1
-
50
-
-
0027817476
-
Structure and function of channel-forming peptaibols
-
Sansom MSP (1993b) Structure and function of channel-forming peptaibols. Quart Rev Biophys 26: 365-421
-
(1993)
Quart Rev Biophys
, vol.26
, pp. 365-421
-
-
Sansom, M.S.P.1
-
51
-
-
0027339698
-
Influenza virus M2 protein: A molecular modelling study of the ion channel
-
Sansom MSP, Kerr ID (1993) Influenza virus M2 protein: a molecular modelling study of the ion channel. Prot Eng 6: 65-74
-
(1993)
Prot Eng
, vol.6
, pp. 65-74
-
-
Sansom, M.S.P.1
Kerr, I.D.2
-
52
-
-
0029124070
-
Transbilayer pores formed by β-barrels: Molecular modelling of pore structures and properties
-
Sansom MSP, Kerr ID (1995) Transbilayer pores formed by β-barrels: molecular modelling of pore structures and properties. Biophys J 69: 1334-1343
-
(1995)
Biophys J
, vol.69
, pp. 1334-1343
-
-
Sansom, M.S.P.1
Kerr, I.D.2
-
54
-
-
0028949136
-
Seven-helix bundles: Molecular modelling via restrained molecular dynamics
-
Sansom MSP, Son HS, Sankararamakrishnan R, Kerr ID, Breed J (1995) Seven-helix bundles: molecular modelling via restrained molecular dynamics. Biophys J 68: 1295-1310
-
(1995)
Biophys J
, vol.68
, pp. 1295-1310
-
-
Sansom, M.S.P.1
Son, H.S.2
Sankararamakrishnan, R.3
Kerr, I.D.4
Breed, J.5
-
56
-
-
0024848780
-
The structure of ion channels in membrane of excitable cells
-
Unwin N (1989) The structure of ion channels in membrane of excitable cells. Neuron 3: 665-676
-
(1989)
Neuron
, vol.3
, pp. 665-676
-
-
Unwin, N.1
-
57
-
-
0027506299
-
Nicotinic acetylcholine receptor at 9 Å resolution
-
Unwin N (1993) Nicotinic acetylcholine receptor at 9 Å resolution. J Mol Biol 229: 1101-1124
-
(1993)
J Mol Biol
, vol.229
, pp. 1101-1124
-
-
Unwin, N.1
-
58
-
-
0028921479
-
Acetylcholine receptor channel imaged in the open state
-
Unwin N (1995) Acetylcholine receptor channel imaged in the open state. Nature 373: 37-43
-
(1995)
Nature
, vol.373
, pp. 37-43
-
-
Unwin, N.1
-
59
-
-
0027407525
-
Theoretical studies of the relaxation of a monomeric subunit of HIV-1 protease in water using molecular dynamics
-
Venable RM, Brooks BR, Carson FW (1993) Theoretical studies of the relaxation of a monomeric subunit of HIV-1 protease in water using molecular dynamics. Proteins: Struct Func Genet 15: 374-384
-
(1993)
Proteins: Struct Func Genet
, vol.15
, pp. 374-384
-
-
Venable, R.M.1
Brooks, B.R.2
Carson, F.W.3
-
60
-
-
0029375244
-
Projection map of aquaporin-1 determined by electron crystallography
-
Walz T, Typke D, Smith BL, Agre P, Engel A (1995) Projection map of aquaporin-1 determined by electron crystallography. Nature Struct Biol 2: 730-732
-
(1995)
Nature Struct Biol
, vol.2
, pp. 730-732
-
-
Walz, T.1
Typke, D.2
Smith, B.L.3
Agre, P.4
Engel, A.5
-
61
-
-
0029971826
-
Engineering stabilized ion channels: Covalent dimers of alamethicin
-
You S, Peng S, Lien L, Breed J, Sansom MSP, Woolley GA (1996) Engineering stabilized ion channels: covalent dimers of alamethicin. Biochem 35: 6225-6232
-
(1996)
Biochem
, vol.35
, pp. 6225-6232
-
-
You, S.1
Peng, S.2
Lien, L.3
Breed, J.4
Sansom, M.S.P.5
Woolley, G.A.6
|