Partial characterization of the genome of nine animal caliciviruses

Archives of Virology

Volumn 141, Issue 12, 1996, Pages 2443-2456

  Matson, D O ^a,f   Berke, T ^a   Dinulos, M B ^a,d   Poet, E ^b,e   Zhong, W M ^a   Dai, X M ^a   Jiang, X ^a   Golding, B ^c   Smith, A W ^b  

^a CHILDREN S HOSPITAL OF THE KING S DAUGHTERS   (United States)

^b OREGON STATE UNIVERSITY   (United States)

^c MCMASTER UNIVERSITY   (Canada)

^d SEATTLE CHILDREN S RESEARCH INSTITUTE   (United States)

^e UNIVERSITY OF GEORGIA   (United States)

^f CENTER FOR PEDIATRIC RESEARCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0030456406     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF01718642     Document Type: Article

References (37)

1. Barlough JE, Berry ES, Skilling DE, Smith AW (1986) The marine calicivirus story. Compendium on Continuing Education for the Practicing Veterinarian 9: F5-13, F75-82
2. Berry ES, Barlough JE, Skilling DE, Smith AW, Vedros NA (1985) Calicivirus isolation from an outbreak of vesicular disease in California pinnipeds. Proceedings of the Sixteenth Annual Conference of the International Association of Acquatic Animal Medicine, pp 102-107
3. Bruenn JA (1991) Relationships among the positive strand and double-strand RNA viruses as viewed through their RNA-dependent RNA polymerases. Nucleic Acids Res 19: 217-226
4. Carter MJ, Milton ID, Meanger J, Bennett M, Gaskell RM, Turner PC (1992) The complete nucleotide sequence of a feline calicivirus. Virology 190: 443-448
5. Cubitt W, Bradley D, Carter M, Chiba S, Estes M, Saif L, Schaffer F, Smith A, Studdert M, Thiel H-J (1995) Caliciviridae. Arch Virol 140: 359-363
6. Dinulos MB, Matson DO (1994) Recent developments with human caliciviruses. Pediatr Infect Dis J 13: 998-1003
7. Felsenstein J (1993) PHYLIP (Phylogeny Inference Package) version 3.5 c. Distributed by the author. Department of Genetics, University of Washington, Seattle
8. Higgins DG, Sharp PM (1988) CLUSTAL: a package for performing multiple sequence alignment on a microcomputer. Gene 73: 237-244
9. Jiang X, Matson DO, Velazquez FR, Zhong W-M, Hu J, Ruiz-Palacios G, Pickering LK (1995) A study of Norwalk-related viruses in Mexican children. J Med Virol 47: 309-316
10. Jiang X, Wang K, Graham DY, Estes MK (1992) Detection of Norwalk virus in stool using polymerase chain reaction. J Clin Microbiol 30: 2529-2534
11. Jiang X, Wang M, Wang K, Estes MK (1993) Sequence and genomic organization of Norwalk virus. Virology 195: 51-61
12. Kapikian AZ, Chanock RM (1990) Norwalk group of viruses. In: Fields BN, Knipe DM (eds) Virology. Raven Press, New York, pp 671-693
13. Lambden PR, Caul EO, Ashley CR, Clarke IN (1993) Sequence and genome organization of a human small round-structured (Norwalk-like) virus. Science 259: 516-519
14. Lew JF, Kapikian AZ, Jiang X, Estes MK, Green KY (1994) Molecular characterization and expression of the capsid protein of a Norwalk-like virus recovered from a desert shield troop with gastroenteritis. Virology 200: 319-325
15. Lew JF, Petric M, Kapikian AZ, Jiang X, Estes MK, Green KY (1994) Identification of mini-reovirus as a Norwalk-like virus in pediatric patients with gastroenteritis. J Virol 68: 3391-3396
16. Liu BL, Clarke IN, Caul EO, Lambden PR (1995) Human enteric calicivruses have a unique genome structure and are distinct from the Norwalk-like viruses. Arch Virol 140: 1-12
17. Matson DO, Estes MK, Glass RI, Bartlett AV, Penaranda M, Calomeni E, Tanaka T, Nakata S, Chiba S (1989) Human calicivirus-associated diarrhea in children attending day care centers. J Infect Dis 159: 71-78
18. Matson DO, Zhong W-M, Nakata S, Numata K, Jiang X, Pickering LK, Chiba S, Estes MK (1995) Molecular characterization of a human calicivirus with sequence relationships closer to animal caliciviruses than other known human caliciviruses. J Med Virol 45: 215-222
19. Meyers G, Wirblich C, Thiel H-J (1991) Rabbit hemorrhagic disease virus - molecular cloning and nucleotide sequencing of a calicivirus genome. Virology 184: 664-676
20. Nakata S, Chiba S, Terashima H, Yokoyama T, Nakao T (1985) Humoral immunity in infants with gastroenteritis caused by human calicivirus. J Infect Dis 152: 274-279
21. Neill JD (1990) Nucleotide sequence of a region of the feline calicivirus genome which encodes picornavirus-like RNA-dependent RNA polymerase, cysteine protease and 2C polypeptides. Virus Res 17: 145-160
22. Neill JD (1992) Nucleotide sequence of the capsid protein gene of two serotypes of San Miguel sea lion virus: identification of conserved and non-conserved amino acid sequences among calicivirus capsid proteins. Virus Res 24: 211-222
23. Neill JD, Reardon IM, Heinrikson RL (1991) Nucleotide sequence and expression of the capsid protein gene of feline calicivirus. J Virol 65: 5440-5447
24. Poet SE, Skilling DE, DeLong RL, Smith AW (1994) Detection and isolation of a calicivirus from a bivalve mollusk (Mytilus californianus) collected from rocks adjacent to pinniped rookeries. Proceedings of the Twenty-Fifth Annual Conference of the International Association of Aquatic Animal Medicine, p 106
25. Prasad BVV, Matson DO, Smith AW (1994) Three-dimensional structure of calicivirus. J Mol Biol 240: 256-264
26. Smith AW, Akers TG, Madin SH, Vedros NA (1973) San Miguel sea lion virus isolation, preliminary characterization and relationship to vesicular exanthema of swine virus. Nature 244: 108-110
27. Smith AW, Anderson MP, Skilling DE, Barlough JE, Ensley PK (1986) First isolation of calicivirus from reptiles and amphibians. Am J Vet Res 47: 1718-1721
28. Smith AW, Boyt PM (1990) Caliviruses of ocean origin: a review. J Zoo Wildl Med 21: 3-23
29. Smith AW, Prato CM, Skilling DE (1977) Characterization of two new serotypes of San Miguel sea lion virus. Intervirology 8: 30-36
30. Smith AW, Skilling DE, Ensley PK, Benirschke K, Lester TL (1983) Calicivirus isolation and persistence in a pygmy chimpanzee (Pan paniscus). Science 221: 79-81
31. Smith AW, Skilling DE, Latham AB (1981) Isolation and identification of five new serotypes of calicivirus from marine mammals. Am J Vet Res 42: 693-694
32. Smith AW, Skilling DE, Ridgway S (1983) Calicivirus-induced vesicular disease in cetaceans and probable interspecies transmission. J Am Vet Med Assoc 183: 1223-1225
33. Studdert MJ (1978) Caliciviruses. Arch Virol 58: 157-191
34. Tohya Y, Taniguchi Y, Takahashi E, Utagawa E, Takeda N, Miyamura K, Yamazaki S, Mikami T (1991) Sequence analysis of the 3′-end of feline calicivirus genome. Virology 183: 810-814
35. Wang JX, Jiang X, Madore HP, Desselberger U, Gray J, Ando T, Oishi I, Estes MK (1994) Sequence diversity of small round structured viruses in the Norwalk virus group. J Virol 68: 5982-5990
36. Wirblich C, Meyers G, Ohlinger VF, Capucci L, Eskens U, Haas B, Theil H-J (1994) European brown hare syndrome virus: relationship to rabbit hemorrhagic disease virus and other caliciviruses. J Virol 68: 5164-5173
37. Berry ES, Skilling DE, Degner M, Smith AW (1987) Marine calicivirus disease in man. Annual Meeting of the American Society for Microbiology (Abstract)