Clustering of Argentinean Tospoviruses with existing species in the genus by sequence analysis of a 450-nucleotide RNA region of the N gene

Virus Genes

Volumn 13, Issue 3, 1996, Pages 255-262

  Dewey, Ricardo ^a,d   Semorile, Liliana ^a,b   Crisci, Jorge ^c   Grau, Oscar ^a,d  

^a FACULTAD DE CIENCIAS EXACTAS   (Argentina)

^b UNIVERSIDAD NACIONAL DE QUILMES   (Argentina)

^c FACULTAD DE CIENCIAS NATURALES Y MUSEO   (Argentina)

^d INSTITUTO NACIONAL DE TECNOLOGÍA AGROPECUARIA INTA   (Argentina)

Author keywords

Cladistics; N gene; RT PCR; Tospovirus

Indexed keywords

VIRUS RNA;

AMINO ACID SEQUENCE; ARTICLE; GENETIC VARIABILITY; MOLECULAR CLONING; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA SEQUENCE; SEQUENCE HOMOLOGY; TOSPOVIRUS; VIRUS CLASSIFICATION; VIRUS GENE;

AMINO ACID SEQUENCE; ARGENTINA; BASE SEQUENCE; CLONING, MOLECULAR; GENES, VIRAL; MOLECULAR SEQUENCE DATA; NUCLEOCAPSID; NUCLEOCAPSID PROTEINS; PHYLOGENY; POLYMERASE CHAIN REACTION; RNA, VIRAL; SEQUENCE ANALYSIS, RNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; TOSPOVIRUS; TRANSCRIPTION, GENETIC;

EID: 0030444499     PISSN: 09208569     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF00366986     Document Type: Article

References (36)

1. Samuel, G., Bald, J.G., and Pittman, H.A., Commonwealth Council of Science and Industry. Research Bulletin No. 44, 1930.
2. Law, M.D., Speck, J., and Moyer, J.W., J Gen Virol 72, 2597-2601, 1991.
3. Law, M.D., Speck, J., and Moyer, J.W., Virology 188, 732-741, 1992.
4. De Avila, A.C., De Haan, P., Kitajima, E.W., Kormelink, R., Resende, R. de O., Goldbach, R., and Peters, D., J Phytopathology 134, 133-151, 1992.
5. De Avila, A.C., De Haan, P., Kormelink, R., Resende, R. de O., Goldbach, R., and Peters, D., J Gen Virol 74, 153-159, 1993.
6. Murphy, F.A., Fauquet, C.M., Mayo, M.A., Jarvis, A.W., Ghabrial, S.A., Summers, M.D., Martelli, G.P., and Bishop, D.H.L. Eds. Sixth Report of The International Committee on Taxonomy of Viruses. Archives of Virology, Springer Verlag, Wien/New York, 1995.
7. Francki, R.I.B., Fauquet, C.M., Knudson, D.L., and Brown, F., Classification and nomenclature of viruses: Fifth Report of the International Committee on Taxonomy of Viruses. Archieves of Virology. Supplement 2, 1991.
8. Peters, D., De Avila, A.C., Kitajima, E.W., Resende, R. de O., De Haan P., and Goldbach, R. An overview of tomato spotted wilt virus. In: Virus-thrips-plant interactions in TSWV, Proceedings of USDA Workshop, Beltsville, USA (H.T. Hsu and R.H. Lawson, Eds.). National Technology Information Service, Springfield, pp. 1-44, 1991.
9. Sakimura, K., The present status of thrips-born viruses. In: Biological transmission of disease agents. (K. Maramorosch Ed.). New York: Academic Press, 1962, pp. 33.
10. Kitajima, E.W., Virology 26, 11-19, 1965.
11. De Haan, P., Kormelink, R., Resende, R, de O., Van Poelwijk, F., Peters, D., and Goldbach, R., J Gen Virol 72, 2207-2216, 1991.
12. Kormelink, R., De Haan, P., Meurs, C., Peters, D., and Goldbach, R., J Gen Virol 73, 2795-2804, 1992.
13. Kormelink, R., Storms, M., Van Lent, J., Peters, D., and Goldbach, R., Virology 200, 56-65, 1994.
14. De Haan, P., Wagemaker, L., Peters, D., and Goldbach, R., J Gen Virol 71, 1001-1007, 1990.
15. Law, M. D. and Moyer, J.W., J Gen Virol 71, 933-938, 1990.
16. De Avila, A.C., Huguenot, C., Resende, R. de O., Kitajima, E.W., Goldbach, R., and Peters, D., J Gen Virol 71, 2801-2807, 1990.
17. Hennig, W., Phylogenetic Systematics. University of Illinois Press, Urbana, 1966.
18. Forey, P.L., Humphries, C.J. Kitching, I.L., Scotland, R.W., Sicbert, D.J., and Williams, D.M., Cladistics: A Practical Course in Systematics. The Systematic Association Publication No. 10. Oxford Publications. New York, 1993.
19. Gielen, J.J.L., De Haan, P., Kool, A.J., Peters, D., Van Grinsven, M.Q.J.M., and Goldbach, R.W., Bio/Technology 9, 1363-1367, 1991.
20. De Haan, P., Gielen, J.J.L., Prins, M., Wijkamp, I.G., Van Schepen, A., Peters, D., Van Grinsven, M.Q.J.M., and Goldbach R., Bio/Technology 10, 1133-1137, 1992.
21. Pang, S.Z., Nagpala, P., Wang, M., Slightom, J.L., and Gonsalves, D., Phytopathol 82, 1223-1229, 1992.
22. Pang, S.Z., Slightom, J. L. and Gonsalves, D., Bio/Technology 11, 819-824, 1993.
23. Prins, M., De Haan, P., Luyten, R., Van Veller, M., Van Grinsven, M.Q.J.M., and Goldbach, R., Mol Plant-Microbe Interact, 8, 85-91, 1995.
24. Dewey, R.A., Semorile, L.C., and Grau, O., J Virol Methods 56, 19-26, 1996.
25. Jones, T.D., Buck, K.W., and Plumb, R.T., J Virol Methods 35, 287-296, 1991.
26. Robles, J. and Doers, M., Promega Notes 45, 19-20, 1994.
27. Sanger, F., Nicklen, S., and Coulson, A.R., Proc Natl Acad Sci USA 74, 5463-5467, 1977.
28. Zhang, H., Scholl, R., Browse, J., and Somerville, C., Nucl Acids Res 16, 1220, 1988.
29. Devereux, J., Haeberli, P., and Smithies, O., Nucl Acids Res 12, 387-395, 1984.
30. Higgins, D.G. and Sharp, P.M., Gene 73, 237-244, 1988.
31. De Haan, P., De Avila, A.C., Kormelink, R., Westerbroek, A., Gielen, J.J.L., Peters, D., and Goldbach, R., FEBS letters 306, 27-32, 1992.
32. Giorgi, C., Accardi, L., Nicoletti, L., Gro, M.C., Takehara, K., Hilditch, C., and Bishop, D.H.L., Virology 180, 738-753, 1991.
33. Swofford, D.L. PAUP: Phylogenetic Analysis Using Parsimony, Version 3.1. Computer program distributed by the Illinois Natural History Survey, Champaign, Illinois, 1991.
34. Dewey, R.A., Semorile, L.C., Grau, O., De Avila, A.C., and Kitajima, E.W., J Phytopathology 143, 713-717, 1995.
35. Fucharoen, S., Fucharoen, G., Fucharoen, P., and Fukumaki, Y., J Biol Chem 264, 7780-7783, 1989.
36. Farris, J. S., Adv Cladistics 1, 3-23, 1981.