Quinoprotein-catalysed reactions

Biochemical Journal

Volumn 320, Issue 3, 1996, Pages 697-711

  Anthony, Christopher ^a  

^a UNIVERSITY OF SOUTHAMPTON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

AMINE OXIDASE (FLAVIN CONTAINING); ASPARTIC ACID; OXIDOREDUCTASE; PROTON; PYRROLOQUINOLINEQUINONE; QUINONE DERIVATIVE; TRYPTOPHAN DERIVATIVE;

CATALYSIS; ELECTRON TRANSPORT; ENZYME ACTIVE SITE; ENZYME CONFORMATION; ENZYME MECHANISM; ENZYME SUBSTRATE COMPLEX; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL; REVIEW; STRUCTURE ACTIVITY RELATION; X RAY CRYSTALLOGRAPHY;

EID: 0030442943     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/bj3200697     Document Type: Review

References (144)

1. Hauge, J. G. (1964) J. Biol. Chem. 239, 3630-3639
2. Anthony, C. and Zatman, L. J. (1967) Biochem. J. 104, 960-969
3. Duine, J. A., Frank, J. and Westerling, J. (1978) Biochim. Biophys. Acta 524, 277-287
4. Duine, J. A. and Frank, J. (1980) Biochem. J. 187, 221-226
5. Salisbury, S. A., Forrest, H. S., Cruse, W. B. T. and Kennard, O. (1979) Nature (London) 280, 843-844
6. Duine, J. A., Frank, J. and Verwiel, P. E. J. (1980) Eur. J. Biochem. 108, 187-192
7. McIntire, W. S., Wemmer, D. E., Chistoserdov, A. and Lidstrom, M. E. (1991) Science 252, 817-824
8. Janes, S. M., Mu, D., Wemmer, D., Smith, A. J., Kaur, S., Maltby, D., Burlingame, A. L. and Klinman, J. P. (1990) Science 248, 981-987
9. 8a Wang, S. X., Mure, M., Medzihradszky, K. F., Burlingame, A. L., Brown, D. E., Dooley, D. M., Smith, A. J., Kagan, H. M. and Klinman, J. P. (1996) Science 273, 1078-1084
10. Cozier, G. E., Giles, I. G. and Anthony, C. (1995) Biochem. J. 307, 375-379
11. Cozier, G. E. and Anthony, C. (1995) Biochem. J. 312, 679-685
12. Anthony, C. (1986) Adv. Microb. Physiol. 27, 113-210
13. Duine, J. A., Frank, J. and Jongejan, J. A. (1987) Adv. Enzymol. 59, 169-212
14. Duine, J. A. (1991) Eur. J. Biochem. 200, 271-284
15. Anthony, C. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 17-45, Marcel Dekker, New York
16. Anthony, C., Ghosh, M. and Blake, C. C. F. (1994) Biochem. J. 304, 665-674
17. Anthony, C. (1992) Biochim. Biophys. Acta 1099, 1-15
18. Anthony, C. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 223-244, Marcel Dekker, New York
19. Goodwin, P. M. and Anthony, C. (1995) Microbiology 141, 1051-1064
20. Nunn, D. N., Day, D. J. and Anthony, C. (1989) Biochem. J. 260, 857-862
21. Richardson, I. W. and Anthony, C. (1992) Biochem. J. 287, 709-715
22. White, S., Boyd, G., Mathews, F. S., Xia, Z. X., Dai, W. W., Zhang, Y. F. and Davidson, V. L. (1993) Biochemistry 32, 12955-12958
23. Ghosh, M., Anthony, C., Harlos, K., Goodwin, M. G. and Blake, C. C. F. (1995) Structure 3, 177-187
24. Duine, J. A., Frank, J. and Verwiel, P. E. J. (1981) Eur. J. Biochem. 118, 395-399
25. Dooley, D. M. and Brown, D. E. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 132-140, Marcel Dekker, New York
26. Dooley, D. M. and Brown, D. E. (1995) Methods Enzymol. 258, 132-140
27. Klinman, J. P. and Mu, D. (1994) Annu. Rev. Biochem. 63, 299-344
28. Xia, Z. X., Dai, W. W., Xiong, J. P., Hao, Z. P., Davidson, V. L., White, S. and Mathews, F. S. (1992) J. Biol. Chem. 267, 22289-22297
29. Blake, C. C. F., Ghosh, M., Harlos, K., Avezoux, A. and Anthony, C. (1994) Nature Struct. Biol. 1, 102-105
30. Anthony, C., Ghosh, M. and Blake, C. C. F. (1994) Biochem. J. 304, 665-674
31. Xia, Z., Dai, W., Zhang, Y., White, S. A., Boyd, G. D. and Mathews, F. S. (1996) J. Mol. Biol. 259, 480-501
32. Avezoux, A., Goodwin, M. G. and Anthony, C. (1995) Biochem. J. 307, 735-741
33. Frank, J., Dijkstra, M., Balny, C., Verwiel, P. E. J. and Duine, J. A. (1989) in PQQ and Quinoproteins (Jongejan, J. A. and Duine, J. A., eds.), pp. 13-22, Kluwer Academic Publishers, Dordrecht
34. Duine, J. A. and Frank, J. (1980) Biochem. J. 187, 213-219
35. Frank, J., Dijkstra, M., Duine, A. J. and Balny, C. (1988) Eur. J. Biochem. 174, 331-338
36. Dijkstra, M., Frank, J. and Duine, J. A. (1989) Biochem. J. 257, 87-94
37. Dekker, R. H., Duine, J. A., Frank, J., Verwiel, P. E. J. and Westerling, J. (1982) Eur. J. Biochem. 125, 69-73
38. Ohshiro, Y. and Itoh, S. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 309-329, Marcel Dekker, New York
39. Frank, J., van Krimpen, S. H., Verwiel, P. E. J., Jongejan, J. A., Mulder, A. C. and Duine, J. A. (1989) Eur. J. Biochem. 184, 187-195
40. Goodwin, M. G. and Anthony, C. (1996) Biochem. J. 318, 673-679
41. Harris, T. K. and Davidson, V. L. (1994) Biochem. J. 300, 175-182
42. Harris, T. K. and Davidson, V. L. (1993) Biochemistry 32, 14145-14150
43. Forrest, H. S., Salisbury, S. A. and Kilty, C. G. (1980) Biochem. Biophys. Res. Commun. 97, 248-251
44. Itoh, S., Ogino, M., Fukui, Y., Murao, H., Komatsu, M., Ohshiro, Y., Inoue, T., Kai, Y. and Kasai, N. (1993) J. Am. Chem. Soc. 115, 9960-9967
45. Nunn, D. N. and Anthony, C. (1988) Biochem. J. 256, 673-676
46. Chen, L. Y., Durley, R. C. E., Mathews, F. S. and Davidson, V. L. (1994) Science 264, 86-90
47. Chan, H. T. C. and Anthony, C. (1991) Biochem. J. 280, 139-146
48. Cox, J. M., Day, D. J. and Anthony, C. (1992) Biochim. Biophys. Acta 1119, 97-106
49. Dales, S. L. and Anthony, C. (1995) Biochem. J. 312, 261-265
50. Harris, T. K., Davidson, V. L., Chen, L. Y., Mathews, F. S. and Xia, Z. X. (1994) Biochemistry 33, 12600-12608
51. Anthony, C. (1988) in Bacterial Energy Transduction (Anthony, C., ed.), pp. 293-316, Academic Press, London
52. Matsushita, K. and Adachi, O. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 47-63, Marcel Dekker, New York
53. Schrover, J. M. J., Frank, J., van Wielink, J. E. and Duine, J. A. (1993) Biochem. J. 290, 123-127
54. Matsushita, K., Toyama, H. and Adachi, O. (1994) Adv. Microb. Physiol. 36, 247-301
55. Inoue, T., Sunagawa, M., Mori, A., Imai, C., Fukuda, M., Takagi, M. and Yano, K. (1989) J. Bacteriol. 171, 3115-3122
56. Inoue, T., Sunagawa, M., Mori. A., Imai, C., Fukuda, M., Takagi, M. and Yano, K. (1990) J. Ferment. Bioeng. 70, 58-60
57. Stoorvogel, J., Kraayveld, D. E., van Sluis, C. A., Jongejan, J. A., Devries, S. and Duine, J. A. (1996) Eur. J. Biochem. 235, 690-698
58. Matsushita, K., Shinagawa, E., Inoue, T., Adachi, O. and Ameyama, M. (1986) FEMS Microbiol. Lett. 37, 141-144
59. Matsushita, K., Shinagawa, E., Adachi, O. and Ameyama, M. (1989) J. Biochem. (Tokyo) 105, 633-637
60. Yamada, M., Sumi, K., Matsushita, K., Adachi, O. and Yamada, Y. (1993) J. Biol. Chem. 268, 12812-12817
61. Sakamoto, K., Miyoshi, H., Matsushita, K., Nakagawa, M., Ikeda, J., Ohshima, M., Adachi, O., Akagi, T. and Iwamura, H. (1996) Eur. J. Biochem. 237, 128-135
62. Imanaga, Y. (1989) in PQQ and Quinoproteins (Jongejan, J. A. and Duine, J. A., eds.), pp. 87-96, Kluwer Academic Publishers, Dordrecht
63. Ameyama, M., Nonobe, M., Hayashi, M., Shinagawa, E., Matsushita, K. and Adachi, O. (1985) Agric. Biol. Chem. 49, 1227-1231
64. Buurman, E. T., Tenvoorde, G. J. and Demattos, M. J. T. (1994) Microbiology 140, 2451-2458
65. Eady, R. R. and Large, P. J. (1968) Biochem. J. 106, 245-255
66. Eady, R. R. and Large, P. J. (1971) Biochem. J. 123, 757-771
67. Tobari, J. and Harada, Y. (1981) Biochem. Biophys. Res. Commun. 101, 502-508
68. Shirai, S., Matsumoto, T. and Tobari, J. (1978) J. Biochem. (Tokyo) 83, 1599-1607
69. Matsumoto, T., Hiraoka, B. Y. and Tobari, J. (1978) Biochim. Biophys. Acta 522, 303-310
70. Kenney, W. C. and McIntire, W. S. (1983) Biochemistry 22, 3858-3868
71. McIntire, W. S. and Stults, J. T. (1986) Biochem. Biophys. Res. Commun. 141, 562-568
72. Husain, M. and Davidson, V. L. (1987) J. Bacteriol. 169, 1712-1717
73. Davidson, V. L. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 73-95, Marcel Dekker, New York
74. Vellieux, F. M. D. and Hol, W. G. J. (1989) FEBS Lett. 255, 460-464
75. McIntire, W. S. (1995) Methods Enzymol. 258, 149-164
76. Chistoserdov, A. Y., Tsygankov, Y. D. and Lidstrom, M. E. (1990) Biochem. Biophys. Res. Commun. 172, 211-216
77. Chen, L. Y., Mathews, F. S., Davidson, V. L., Huizinga, E. G., Vellieux, F. M. D., Duine, J. A. and Hol, W. G. J. (1991) FEBS Lett. 287, 163-166
78. Backes, G., Davidson, V. L., Huitema, F., Duine, J. A. and Sanders-Loehr, J. (1991) Biochemistry 30, 9201-9210
79. McIntire, W. S., Bates, J. L., Brown, O. E. and Dooley, D. M. (1991) Biochemistry 30, 125-133
80. Anthony, C. (1982) The Biochemistry of Methylotrophs, p. 207, Academic Press, London
81. Davidson, V. L., Brooks, H. B., Graichen, M. E., Jones, L. H. and Hyun, Y. L. (1995) Methods Enzymol. 258, 176-190
82. Davidson, V. L. (1989) Biochem. J. 261, 107-111
83. McWhirter, R. B. and Klapper, M. H. (1989) in PQQ and Quinoproteins (Jongejan, J. A. and Duine, J. A., eds.), pp. 259-268, Kluwer Academic Publishers, Dordrecht
84. Brooks, H. B., Jones, L. H. and Davidson, V. L. (1993) Biochemistry 32, 2725-2729
85. Hyun, Y. L. and Davidson, V. L. (1995) Biochim. Biophys. Acta Protein Struct. Mol. Enzymol. 1251, 198-200
86. Hyun, Y. L. and Davidson, V. L. (1995) Biochemistry 34, 816-323
87. Grant, K. L. and Klinman, J. P. (1989) Biochemistry 28, 6597-6605
88. Davidson, V. L., Jones, L. H. and Graichen, M. E. (1992) Biochemistry 31, 3385-3390
89. Govindaraj, S., Eisenstein, E., Jones, L. H., Sanders-Loehr, J., Chistoserdov, A. Y., Davidson, V. L. and Edwards, S. L. (1994) J. Bacteriol. 176, 2922-2929
90. Huizinga, E. G., Vanzanten, B. A. M., Duine, J. A., Jongejan, J. A., Huitema, F., Wilson, K. S. and Hol, W. G. J. (1992) Biochemistry 31, 9789-9795
91. Moënne-Loccoz, P., Nakamura, N., Itoh, S., Fukuzumi, S., Gorren, A. C. F., Duine, J. A. and Sanders-Loehr, J. (1996) Biochemistry 35, 4713-4720
92. McIntire, W. S. (1987) J. Biol. Chem. 262, 11012-11019
93. Davidson, V. L. and Jones, L. H. (1992) Biochim. Biophys. Acta 1121, 104-110
94. Mathews, F. S. (1995) Methods Enzymol. 258, 191-216
95. de Beer, R., Duine, J. A., Frank, J. and Large, P. J. (1980) Biochim. Biophys. Acta 622, 370-374
96. van Wielink, J. E., Frank, J. and Duine, J. A. (1989) in PQQ and Quinoproteins (Jongejan, J. A. and Duine, J. A., eds.), pp. 269-278, Kluwer Academic Publishers, Dordrecht
97. Warncke, K., Brooks, H. B., Babcock, G. T., Davidson, V. L. and McCracken, J. (1993) J. Am. Chem. Soc. 115, 6464-6465
98. Warncke, K., Brooks, H. B., Lee, H. I., McCracken, J., Davidson, V. L. and Babcock, G. T. (1995) J. Am. Chem. Soc. 117, 10063-10075
99. 97a Bishop, G. R., Brooks, H. B. and Davidson, V. L. (1996) Biochemistry 35, 8948-8954
100. Chen, L. Y., Durley, R., Poliks, B. J., Hamada, K., Chen, Z. W., Mathews, F. S., Davidson, V. L., Satow, Y., Huizinga, E., Vellieux, F. M. D. and Hol, W. G. J. (1992) Biochemistry 31, 4959-4964
101. Brooks, H. B. and Davidson, V. L. (1994) Biochemistry 33, 5696-5701
102. Vellieux, F. M. D., Huitema, F., Groendijk, H., Kalk, K. H., Frank, J., Jongejan, J. A., Duine, J. A., Petratos, K., Drenth, J. and Hol, W. G. J. (1989) EMBO J. 8, 2171-2178
103. Chen, L. Y., Mathews, F. S., Davidson, V. L., Huizinga, E. G., Vellieux, F. M. D. and Hol, W. G. J. (1992) Protein Struct. Funct. Genet. 14, 288-299
104. Gray, K. A., Davidson, V. L. and Knaff, D. B. (1988) J. Biol. Chem. 263, 13987-13990
105. Merli, A., Brodersen, D. E., Morini, B., Chen, Z. W., Durley, R. C. E., Mathews, F. S., Davidson, V. L. and Rossi, G. L. (1996) J. Biol. Chem. 271, 9177-9180
106. Mondovi, B. (1986) Structure and Function of Amine Oxidases, CRC Press, Baton Rouge
107. McIntire, W. S. and Hartmann, C. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 97-171, Marcel Dekker, New York
108. Knowles, P. F. and Dooley, D. M. (1994) in Metal Ions in Biological Systems (Seigel, H., ed.), pp. 361-403, Marcel Dekker, New York
109. Hartmann, C. and Dooley, D. M. (1995) Methods Enzymol. 258, 69-90
110. Janes, S. M., Palcic, M. M., Scaman, C. H., Smith, A. J., Brown, D. E., Dooley, D. M., Mure, M. and Klinman, J. P. (1992) Biochemistry 31, 12147-12154
111. Janes, S. M. and Klinman, J. P. (1995) Methods Enzymol. 258, 20-34
112. Nakamura, N., Matsuzaki, R., Choi, Y. H., Tanizawa, K. and Sanders-Loehr, J. (1996) J. Biol. Ctiem. 271, 4718-4724
113. Adams, G. W., Mayer, P., Medzihradszky, K. F. and Burlingame, A. L. (1995) Methods Enzymol. 258, 90-114
114. Brown, D. E., McGuirl, M. A., Dooley, D. M., Janes, S. M., Mu, D. and Klinman, J. P. (1991) J. Biol. Chem. 266, 4049-4051
115. Palcic, M. M. and Janes, S. M. (1995) Methods Enzymol. 258, 34-38
116. Knowles, P. F., Strange, R. W., Blackburn, N. J. and Hasnain, S. S. (1989) J. Am. Chem. Soc. 111, 102-107
117. Barker, R., Boden, N., Cayley, G., Charlton, S. C., Henson, R., Holmes, M. C., Kelly, I. D. and Knowles, P. F. (1979) Biochem. J. 177, 289-301
118. Barker, G. J., Knowles, P. F., Pandeya, K. B. and Rayner, J. B. (1986) Biochem. J. 237, 609-612
119. McCracken, J., Peisach, J. and Dooley, D. M. (1987) J. Am. Chem. Soc. 109, 4064-1072
120. Dooley, D. M., McGuirl, M. A., Brown, D. E., Turowski, P. N., McIntire, W. S. and Knowles, P. F. (1991) Nature (London) 349, 262-264
121. Dooley, D. M., McGuirl, M. A., Cote, C. E., Knowles, P. F., Singh, I., Spiller, M., Brown, R. D. and Koenig, S. H. (1991) J. Am. Chem. Soc. 113, 754-761
122. Ruis, F. X., Knowles, P. F. and Pettersson, G. (1984) Biochem. J. 220, 767-772
123. Hartmann, C. and Klinman, J. P. (1987) J. Biol. Chem. 262, 962-965
124. Bushnell, G. W., Louie, G. V. and Brayer, G. D. (1990) J. Mol. Biol. 214, 585-595
125. Lovenberg, W. and Beaven, M. A. (1971) Biochim. Biophys. Acta 251, 452-455
126. Neumann, R., Hevey, R. C. and Abeles, R. H. (1975) J. Biol. Chem. 250, 6362-6367
127. Farnum, M., Palcic, M. and Klinman, J. P. (1986) Biochemistry 25, 1898-1904
128. Hartmann, C. and Klinman, J. P. (1991) Biochemistry 30, 4605-4611
129. Palcic, M. and Klinman, J. P. (1983) Biochemistry 22, 5957-5966
130. Mure, M. and Klinman, J. P. (1993) J. Am. Chem. Soc. 115, 7117-7127
131. Hartmann, C., Brzovic, P. and Klinman, J. P. (1993) Biochemistry 32, 2234-2241
132. Janes, S. M. and Klinman, J. P. (1991) Biochemistry 30, 4599-4605
133. Mure, M. and Klinman, J. P. (1995) Methods Enzymol. 258, 39-52
134. Lindstrom, A., Olsson, B. and Pettersson, G. (1974) Eur. J. Biochem. 48, 237-243
135. Dooley, D. M., McGuirl, M. A., Peisach, J. and McCracken, J. (1987) FEBS Lett. 214, 274-278
136. McCracken, J., Peisach, J., Cote, C. E., McGuirl, M. A. and Dooley, D. M. (1992) J. Am. Chem. Soc. 114, 3715-3722
137. Turowski, P. N., McGuirl, M. A. and Dooley, D. M. (1993) J. Biol. Chem. 268, 17680-17682
138. Moënne-Loccoz, P., Nakamura, N., Steinebach, V., Duine, J. A., Mure, M., Klinman, J. P. and Sanders-Loehr, J. (1995) Biochemistry 34, 7020-7026
139. Parsons, M. R., Convery, M. A., Wilmot, C. M., Yadav, K. D. S., Blakeley, V., Corner, A. S., Phillips, S. E. V., McPherson, M. J. and Knowles, P. F. (1995) Structure 3, 1171-1184
140. Mathews, F. S. and Hol, W. G. J. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 245-273, Marcel Dekker, New York
141. Kumar, V., Dooley, D. M., Freeman, H. C., Guss, J. M., Harvey, I., McGuirl, M. A., Wilce, M. C. J. and Zubak, V. M. (1996) Structure 4, 945-955
142. Kagan, H. M. and Trackman, P. C. (1991) Am. J. Respir. Cell Mol. Biol. 5, 205-210
143. Dooley, D. M. and Brown, D. E. (1993) in Principles and Applications of Quinoproteins (Davidson, V. L., ed.), pp. 132-140, Marcel Dekker, New York
144. Frebort, I., Pec, P., Luhova, L., Toyama, H., Matsushita, K., Hirota, S., Kitagawa, T., Ueno, T., Asano, Y., Kato, Y. and Adachi, O. (1996) Biochim. Biophys Acta Protein Struct. Mol. Enzymol. 1295, 59-72