Combined amino acid speciation in lake sediment and porewater (Aydat Lake, France)

Aquatic Geochemistry

Volumn 2, Issue 1, 1996, Pages 29-49

  Alberic P ^a   Sarazin, G ^b   Michard, G ^b  

^a UNIVERSITÉ D'ORLÉANS   (France)

^b CNRS   (France)

Author keywords

Amino acid; Dissolved organic carbon; Porewater; Sediment

Indexed keywords

AMINO ACID; DIATOM OOZE; LAKE SEDIMENT; POREWATER;

FRANCE, AUVERGNE, AYDAT LAKE;

EID: 0030439148     PISSN: 13806165     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (49)

1. Albéric P. and Khripounoff A. (1984) Relations entre les compositions en acides aminés des particules en voie de sédimentation, du contenu intestinal des holothuries abyssales et du sédiment environnant. Mar. Chem. 14, 379-394.
2. Albéric P., Féral J.-P. and Sibuet M. (1987) Les acides aminés libres, reflet de l'activité bactérienne dans les contenus digestifs des holothuries: différences entre zones abyssale et littorale. C. R. Acad. Sci. Paris 305, III, 203-206.
3. Bada J.L., Hoopes E. and Ho M.-S (1982) Combined amino acids in Pacific Ocean waters. Earth Planet. Sci. Lett. 58, 276-284.
4. Bremner J.M. and Harada T. (1959) Release of ammonium and organic matter from soil by hydrofluoric acid and effect of hydrofluoric acid treatment on extraction of soil organic matter by neutral and alkaline reagents. J. Agric. Sci. 52, 137-146.
5. Burdige D.J. (1989) The effects of sediment slurrying on microbial processes, and the role of amino acids as substrates for sulfate reduction in anoxic marine sediments. Biogeochemistry 8, 1-23.
6. Burdige D.J. and Martens C.S. (1988) Biogeochemical cycling in an organic-rich coastal marine basin: 10. The role of amino acids in sedimentary carbon and nitogen cycling. Geochim. Cosmochim. Acta 52, 1571-1584.
7. Burdige D.J. and Martens C.S. (1990) Biogeochemical cycling in an organic-rich coastal marine basin: 11. The sedimentary cycling of dissolved, free amino acids. Geochim. Cosmochim. Acta 54, 3033-3052.
8. Buscail R. (1991) Le cycle du carbone sur une marge continentale: Aspects biogéochimiques du transfert de la matière organique à l'interface eau-sédiment. Thesis Doctorat d'Etat, Univ. Perpignan, France.
9. Carlson D.J., Mayer L.M., Brann M.L. and Mague T.H. (1985) Binding of monomeric organic compounds to macromolecular dissolved organic matter in seawater. Mar. Chem. 16, 141-153.
10. Chin Y.-P. and Gschwend P.M. (1991) The abundance, distribution, and configuration of porewater organic colloids in recent sediments. Geochim. Cosmochim. Acta 55, 1309-1317.
11. Cole J.J. and Lee C. (1986) Rapid microbial metabolism of non-protein amino acids in the sea. Biogeochem. 2, 299-312.
12. Cowie G.L. and Hedges J.H. (1994) Biochemical indicators of diagenetic alteration in natural organic matter mixtures. Nature 369, 304-307.
13. Degens E.T., Reuter J.H. and Shaw K.N.F. (1964) Biochemical compounds in offshore California sediments and sea waters. Geochim. Cosmochim. Acta 28, 45-66.
14. Hare P.E. (1973) Amino acids, amino sugars and ammonia in sediments from the Cariaco Trench. In Initial Reports of the Deep-Sea Drilling Project 20, pp. 941-942.
15. Hedges J.I., Cowie G.L., Richey J.E., Quay P.D., Benner R., Strom M. and Forsberg B.R. (1994) Origins and processing of organic matter in the Amazon River as indicated by carbohydrates and amino acids. Limnol. Oceanogr. 39, 743-761.
16. Henrichs S.M. and Farrington J.W. (1979) Amino acids in interstitial waters of marine sediments. Nature 279, 319-322.
17. Henrichs S.M. and Farrington J.W. (1987) Early diagenesis of amino acids and organic matter in two coastal marine sediments. Geochim. Cosmochim. Acta 51, 1-15.
18. Henrichs S.M., Farrington J.W. and Lee C. (1984) Peru upwelling region sediments near 15° S. 2. Dissolved free and total hydrolysable amino acids. Limnol. Oceanogr. 29, 20-34.
19. Hesselin R.H. (1976) An in-situ sampler for close interval pore water studies. Limnol. Oceanogr. 21, 912-924.
20. Hoffert M. (1980) Les "argiles rouges des grands fonds" dans le Pacifique centre-est. Authigenèse, transport, diagenèse. Thesis Doctorat d'Etat Univ. Louis-Pasteur, Strasbourg, France.
21. Jørgensen N.O.G., Lindroth P. and Mopper K. (1981) Extraction and distribution of free amino acids and ammonium in sediment interstitial waters from the Limfjord, Denmark. Oceanol. Acta 4, 465-474.
22. Jørgensen N.O.G., Sondergaard M., Hansen H.J., Bosselmann S. and Riemann B. (1983) Diel variation in concentration, assimilation and respiration of dissolved free amino acids in relation to planktonic primary and secondary production in two eutrophic lakes. Hydrobiologia 107, 107-122.
23. Kemp A.L.W. and Mudrochova A. (1973) The distribution and nature of amino acids and other nitrogen-containing compounds in lake Ontario surface sediments. Geochim. Cosmochim. Acta 37, 2191-2206.
24. Krom MD. and Sholkovitz E.R. (1977) Nature and reaction of dissolved organic matter in the interstitial waters of marine sediments. Geochim. Cosmochim. Acta 41, 1565-1573.
25. Lallier-Vergès E. and Albéric P. (1989) Burrowing: a major process in the Mn-Ni enrichment of red clays. Mar. Geol. 86, 75-79.
26. Lallier-Vergès E. and Albéric P. (1990) Optical and geochemical study of organic matter in present oxic sediments (equatorial North Pacific Ocean NIXO area). Oceanol. Acta 10, 281-291.
27. Leenheer J.L. (1981) Comprehensive approach to preparative isolation and fractionation of dissolved organic carbon from natural waters and wastewaters. Env. Sci. Tech. 15, 578-587.
28. Lytle C.R. and Perdu E.M. (1981) Free, proteinaceous, and humic bound amino acids in river water containing high concentration of aquatic humus. Env. Sci. Tech. 15, 224-228.
29. Mopper K. and Degens E.T. (1972) Aspects of the biogeochemistry of carbohydrates and proteins in aquatic environments. Tech. Rep. Woods Hole Oceanogr. Inst, Woods Hole, Mass., WHOI-72-68.
30. Nisenbaum A., Baedecker M.J. and Kaplan I.R. (1971) Studies on dissolved organic matter from interstitial water of a reducing fjord. In Advances in Organic Geochemistry (ed. H.R. Gaertner and H. Wehner), pp. 428-440. Pergamon Press, Oxford
31. Orem W.H. and Gaudette H.E. (1984) Organic matter in anoxic marine pore water: Oxidation effects. Org. Geochem. 5, 175-181.
32. Patience A.J., Lallier-Vergès E., Sifeddine A., Albéric P. and Guillet B. (1995) Organic fluxes and early diagenesis in the lacustrine environment: The superficial sediments of the Lac du Bouchet (Haute Loire, France). In Organic Matter Accumulation (ed. E. Lallier-Vergès, N.-P. Tribovillard and P. Pertrand), Lectures Notes in Earth Sciences, Vol. 57, pp. 146-156. Springer-Verlag, Berlin.
33. Philippe L. (1989) Bilans biogeochimiques du fer et du phosphore dans un écosysteme lacustre eutrophe: Le lac d'Aydat (Puy de Dôme). Thesis Univ. Paris 7.
34. Robertson K.J., Williams P.M. and Bada J.L. (1987) Acid hydrolysis of dissolved combined amino acids in sea water: A precautionary note. Limnol. Oceanogr. 32, 996-997.
35. Sarazin G., Michard G., Al Gharib I. and Bernat M. (1992) Sedimentation rate and early diagenesis of particulate organic nitrogen and carbon in Aydat Lake (Puy de Dôme, France). Chem. Geol. 98, 307-316.
36. Sarazin G., Gaillard J.F., Philippe L. and Rabouille C. (1995) Organic matter mineralization in the pore water of a eutrophic lake (Aydat Lake, Puy de Dôme). Hydrobiologia 315, 95-118.
37. Schroeder R.A. (1975) Absence of β-alanine and γ-aminobutyric acid in cleaned foraminiferal shells: implications for use as a chemical criterion to indicate removal of non-indigenous amino acid contaminants. Earth Planet. Sci. Lett. 25, 274-278.
38. Schroeder R.A. and Bada J.L. (1976) A review of the geochemical applications of the amino acid racemization reaction. Earth Sci. Rev. 12, 347-391.
39. Simpson R.J., Neuberger M.R. and Liu T.-Y. (1976) Complete amino acid analysis of proteins from a single hydrolysate. J. Biol. Chem. 251, 1936-1940.
40. Stanley S.O., Boto K.G., Alongi D.M. and Gillan F.T. (1987) Composition and bacterial utilisation of free amino acids in tropical mangrove sediments. Mar. Chem. 22, 13-30.
41. Sugimura Y. and Susuki Y. (1988) A high-temperature catalytic oxidation method for the determination of non-volatile dissolved organic carbon in seawater by direct injection of a liquid sample. Mar. Chem. 24, 105-131.
42. Terashima M. (1979) The distribution of amino acids in submarine sediments from the eastern part of the East China Sea. Chem. Geol. 25, 135-154.
43. Thenot J.P. and Horning E.C. (1972) Amino acid N-dimethylaminomethylene alkyl esters. New derivatives for GC-MS studies. Anal. Lett. 5, 519-529.
44. Thurman E.M. (1985) Organic Geochemistry of Natural Waters. Martinus Nijhoff/Dr W. Junk Publishers, Dordrecht.
45. Thurman E.M. and Malcolm R.L. (1981) Preparative isolation of aquatic humic substances. Env. Sci. Tech. 15, 463-566.
46. Tipping E., Woof C. and Cooke D. (1981) Iron oxyde from a seasonally anoxic lake. Geochim. Cosmochim. Acta 45, 1411-1419.
47. Tipping E. and Woof C. (1983) Elevated concentrations of humic substances in a seasonally anoxic hypolimnion: evidence for co-accumulation with iron. Arch. Hydrobiol. 98, 137-145.
48. Whelan J.K. (1977) Amino acids in a surface sediment core of the Atlantic abyssal plain. Geochim. Cosmochim. Acta 41, 803-810.
49. Yajima H., Kiso Y., Ogawa H., Fujji N. and Irie H. (1975) Acidolysis of protecting groups in peptide chemistry by fluorosulphonic acid and methanesulphonic acid. Chem. Pharm. Bull. 23, 1164-1166.